Basic Information

Insect: Athalia rosae
Gene Symbol: nfxl1
Assembly: GCA_000344095.2
Location: NW:214636-218113[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 1.1 5.5e+03 -3.2 1.1 15 19 126 130 125 130 0.81

2 22 1.1 6e+03 -3.3 2.8 4 10 161 167 158 167 0.86

3 22 1.9e-07 0.00097 18.4 17.0 1 19 175 192 175 192 0.99

4 22 3.8e-09 2e-05 23.7 13.4 1 19 228 246 228 246 0.97

5 22 1.4 7.6e+03 -3.7 1.1 10 14 253 257 251 257 0.71

6 22 0.6 3.2e+03 -2.4 1.0 5 10 270 275 270 275 0.90

7 22 0.00044 2.3 7.6 10.6 1 18 281 299 281 300 0.93

8 22 1.7 9e+03 -3.9 0.7 6 10 325 329 324 331 0.58

9 22 1.6e-05 0.085 12.2 9.4 1 18 335 352 335 353 0.97

10 22 0.0034 18 4.7 8.0 1 12 387 398 387 398 0.94

11 22 0.91 4.8e+03 -3.0 1.2 6 10 408 412 407 412 0.91

12 22 2.6e-07 0.0014 17.9 15.8 1 19 418 436 418 436 0.93

13 22 0.00017 0.9 8.9 8.9 9 19 484 494 482 494 0.90

14 22 0.0031 16 4.9 5.6 1 12 504 514 504 514 0.95

15 22 1.2 6.3e+03 -3.4 6.7 14 19 543 548 543 548 0.90

16 22 1.6 8.3e+03 -3.8 0.6 9 12 565 568 565 568 0.77

17 22 0.19 9.9e+02 -0.8 0.5 6 10 574 578 573 579 0.85

18 22 0.0015 7.6 5.9 5.1 1 11 584 594 584 595 0.94

19 22 2 1.1e+04 -5.2 4.5 6 10 611 615 607 615 0.71

20 22 0.00032 1.7 8.0 13.0 3 19 624 640 623 640 0.91

21 22 0.00034 1.8 7.9 11.1 1 16 685 699 685 705 0.89

22 22 0.92 4.8e+03 -3.0 0.9 6 10 735 739 734 739 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	1.1	5.5e+03	-3.2	1.1	15	19	126	130	125	130	0.81
2	22	1.1	6e+03	-3.3	2.8	4	10	161	167	158	167	0.86
3	22	1.9e-07	0.00097	18.4	17.0	1	19	175	192	175	192	0.99
4	22	3.8e-09	2e-05	23.7	13.4	1	19	228	246	228	246	0.97
5	22	1.4	7.6e+03	-3.7	1.1	10	14	253	257	251	257	0.71
6	22	0.6	3.2e+03	-2.4	1.0	5	10	270	275	270	275	0.90
7	22	0.00044	2.3	7.6	10.6	1	18	281	299	281	300	0.93
8	22	1.7	9e+03	-3.9	0.7	6	10	325	329	324	331	0.58
9	22	1.6e-05	0.085	12.2	9.4	1	18	335	352	335	353	0.97
10	22	0.0034	18	4.7	8.0	1	12	387	398	387	398	0.94
11	22	0.91	4.8e+03	-3.0	1.2	6	10	408	412	407	412	0.91
12	22	2.6e-07	0.0014	17.9	15.8	1	19	418	436	418	436	0.93
13	22	0.00017	0.9	8.9	8.9	9	19	484	494	482	494	0.90
14	22	0.0031	16	4.9	5.6	1	12	504	514	504	514	0.95
15	22	1.2	6.3e+03	-3.4	6.7	14	19	543	548	543	548	0.90
16	22	1.6	8.3e+03	-3.8	0.6	9	12	565	568	565	568	0.77
17	22	0.19	9.9e+02	-0.8	0.5	6	10	574	578	573	579	0.85
18	22	0.0015	7.6	5.9	5.1	1	11	584	594	584	595	0.94
19	22	2	1.1e+04	-5.2	4.5	6	10	611	615	607	615	0.71
20	22	0.00032	1.7	8.0	13.0	3	19	624	640	623	640	0.91
21	22	0.00034	1.8	7.9	11.1	1	16	685	699	685	705	0.89
22	22	0.92	4.8e+03	-3.0	0.9	6	10	735	739	734	739	0.89

Sequence Information

Coding Sequence: ATGAGGAAATTTAAAAGGGCGCAAGCGCAAAATCAAGCTGCTATTAAAAAGCACATGGTAACTCATCCACTGGTAGAATCATCCAGTGATGACGAGGATGAGTCTGGACaagaaatattggaaaaagcAGTTGGCAATGTTTTAACATCTTACCAGGATCAGGGAGGGGAcccagaaaaaattttgtcttaTTTAGCGGATACCTTTCAATCCAATGGAGCTGTTTGCCTAATATGTATTTCGTCAGTGAAGAAAACAGATGCGaTATGGAGTTGCGGTAGATGTTACTCGTTTATGCATTTATCTTGTATTCAACACTGGATTCGAGATAGTTTGACTTATAAACGCGATCGTGGAATTTCTCAAGTTTGGGCATGCCCAAAATGTCGTACCGAGTATGAAGAAGACCAGGTTCCACAACATTACGAATGTTTTTGTGGAAAGATGAGGAGTCCGCCCTACCAGCCTTGGTGTGTACCACATTCTTGTGGAGAAGCATGCGGAAAGCTTCTTCAACCAAAATGCGGTCATTCGTGTGTCCTACTCTGTCATCCTGGACCTTGTCCTCCATGTCCAAAAATGGTTTCATCAAAGTGTTACTGTCTCAAGCAGCCAGCACGTCCACGACGTTGTAATGCCAAAGAGTGGAGCTGTGCTACTGtctgtggaaaaattttaaaatgtTCTCAACATACGTGCAGGAAAATGTGTCATTCCGGAGATTGCCCACCCTGTAAGGAAGAAGTTTCAGCATCCTGTCATTGTGGAAATGAAACTGAACTCAGACATTGTTTCGATAAGGATTGGCGGTGCAATAAACCTTGCAAAAAGTCTTTATCCTGTAACATCCACATATGTCAGGGTACTTGTCATGCGCCTGGTGATTGTGGGGATTGCTTGACGGCTAAAAACAGGACATGTCCATGTGGGAAAATCAAGTACAGGATATCTTGTAAGCAGGATGCGCCTACATGTGGCGATACATGTGAGAAGTTATTGGATTGTGGATCACATTATTGCAATAAACGTTGCCACCTAGATAGCTGCGGCCAATGCTTAGAGGTTGTAACTAAATCTTGTAAATGTGGTGCTCATCAGAAGGAGTTAGCTTGCGCCAAAGTATTTCATTGTGACACAAAGTGCAAGCAAATTCGATTATGCGGACGTCAtccgtgtaataaaaaatgctGTGATTGtgttaagaaaaataatttttatgccTGCGAAAAGACATGTGATCGTACTTTGAGTTGTCGCAAACACAAATGTCCAGCTCCTTGTCACAGTGGCCCTTGCTATCCATGTCCTCTGACAGATACGATACAATGCCGATGTGGATCGAGTAAAATTGTGATACCATGTGgaactgcaaaaaaaattaagccaCCTCACTGCaataaaatgtgtaaaatTCCACCTATTTGCCATCATTCGAAACGAGAGTCACACAAATGTCATCAAGGACAGTGTCCACCTTGCAAGAAGCAATGCACTTTAACGCTAGAAAAATGTGGTCATATATGTCCAGCCCCTTGTCACACAAAGGTTTGGGTGAAAGTGAATGGCATCACTCAGCCAGCTGGGCCgtgggaaaaacaaaaggacaAAATGCAGTTGAAAACGTTACCCTGCCCACCTTGTCAAGTTTCAGTGATGGTTACATGTTTAGGTGGGCATGAAACTTTACCATGGCCATGTCACAAAGCAGTGTCAACATCTTGTCAAAGACCATGTGGTCAGCTGTTGAGCTGTACAAATCATACGTGCACGCTAGCGTGTCATGTTGTACAAGATTCTGGAGATAATGCTCAACCGACCCCATGCGAAGAATGTGAAAAGCCGTGTGTGATTCCAAGGCCTGAAGGATGTACCCATGTATGCTCCAGCATTTGCCATCCAGCTCCGTGCAAACCCTGCAAGCAAATTGTTCGCCTCCCTTGTCACTGTGCCATTAACACTTTGTACATAAGATGTTCTGAGTTAACATCTGCAAGCGTTGAAAGAAAGATAGAAATCTTCAAATGTGGCAATCAGTGTCCTAAAAATTATCCATGTGGGCATCGATGTGTGGACGATTGTCATCCAGGTTTATGTAAAAGTGCGGGAGAGTGTAAtaagaaagtgaaaatatcGTGCAAGTgtaagagattgaaaaaagactTTTCCTGTCTTCTGATACGATCGGGTAATGCGATTGTAGAATGCGATGAGGTGTgtgatgaaaagaagaaagaacgaaTTCAAGCTCAAGAGGCTGAAGCAGcaaagaagaggaaggaggaaGCACTGCGCAATCAAAGAGAGGtagagaaatttgaaagaaaattcaaacctAGACGTAAATGTAAAGACAAATCCAATGATGAACCCTGTGTTGAGAAATCCAAATGTAATTACCTGAAATGGCTTACAGCCTTATTGGTAATCATAATTGCTTGTCTAGtcacttttttcgtcttcaacATACAATGA
Protein Sequence: MRKFKRAQAQNQAAIKKHMVTHPLVESSSDDEDESGQEILEKAVGNVLTSYQDQGGDPEKILSYLADTFQSNGAVCLICISSVKKTDAIWSCGRCYSFMHLSCIQHWIRDSLTYKRDRGISQVWACPKCRTEYEEDQVPQHYECFCGKMRSPPYQPWCVPHSCGEACGKLLQPKCGHSCVLLCHPGPCPPCPKMVSSKCYCLKQPARPRRCNAKEWSCATVCGKILKCSQHTCRKMCHSGDCPPCKEEVSASCHCGNETELRHCFDKDWRCNKPCKKSLSCNIHICQGTCHAPGDCGDCLTAKNRTCPCGKIKYRISCKQDAPTCGDTCEKLLDCGSHYCNKRCHLDSCGQCLEVVTKSCKCGAHQKELACAKVFHCDTKCKQIRLCGRHPCNKKCCDCVKKNNFYACEKTCDRTLSCRKHKCPAPCHSGPCYPCPLTDTIQCRCGSSKIVIPCGTAKKIKPPHCNKMCKIPPICHHSKRESHKCHQGQCPPCKKQCTLTLEKCGHICPAPCHTKVWVKVNGITQPAGPWEKQKDKMQLKTLPCPPCQVSVMVTCLGGHETLPWPCHKAVSTSCQRPCGQLLSCTNHTCTLACHVVQDSGDNAQPTPCEECEKPCVIPRPEGCTHVCSSICHPAPCKPCKQIVRLPCHCAINTLYIRCSELTSASVERKIEIFKCGNQCPKNYPCGHRCVDDCHPGLCKSAGECNKKVKISCKCKRLKKDFSCLLIRSGNAIVECDEVCDEKKKERIQAQEAEAAKKRKEEALRNQREVEKFERKFKPRRKCKDKSNDEPCVEKSKCNYLKWLTALLVIIIACLVTFFVFNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01303874;
90% Identity: iTF_00175447;
80% Identity: -