Basic Information

Insect: Athalia rosae
Gene Symbol: -
Assembly: GCA_000344095.2
Location: NW:653936-659723[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00036 0.024 14.4 0.1 2 23 817 838 816 838 0.97

2 17 0.77 50 3.9 0.7 1 19 844 862 844 865 0.90

3 17 0.39 25 4.8 1.0 3 23 872 892 870 892 0.96

4 17 0.00012 0.008 15.9 1.8 3 23 901 922 900 922 0.98

5 17 0.0011 0.073 12.8 2.2 1 23 929 952 929 952 0.96

6 17 6.8e-05 0.0045 16.6 0.7 1 23 958 981 958 981 0.94

7 17 0.51 34 4.5 3.6 2 23 989 1009 989 1009 0.96

8 17 1e-07 6.6e-06 25.6 2.1 2 23 1015 1036 1014 1036 0.97

9 17 6.1e-07 4e-05 23.1 0.1 1 23 1042 1064 1042 1064 0.99

10 17 0.00046 0.03 14.1 2.1 2 23 1076 1098 1075 1098 0.95

11 17 0.00074 0.048 13.4 1.6 1 23 1104 1127 1104 1127 0.96

12 17 0.0036 0.24 11.2 2.7 2 23 1149 1171 1148 1171 0.95

13 17 0.0067 0.44 10.4 0.7 2 23 1178 1200 1177 1200 0.96

14 17 2.8e-05 0.0018 17.9 1.0 2 23 1208 1229 1207 1229 0.96

15 17 0.0016 0.1 12.4 2.3 1 23 1235 1258 1235 1258 0.96

16 17 0.068 4.4 7.2 3.3 2 23 1265 1286 1264 1286 0.96

17 17 0.0078 0.51 10.2 1.8 1 23 1292 1314 1292 1314 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00036	0.024	14.4	0.1	2	23	817	838	816	838	0.97
2	17	0.77	50	3.9	0.7	1	19	844	862	844	865	0.90
3	17	0.39	25	4.8	1.0	3	23	872	892	870	892	0.96
4	17	0.00012	0.008	15.9	1.8	3	23	901	922	900	922	0.98
5	17	0.0011	0.073	12.8	2.2	1	23	929	952	929	952	0.96
6	17	6.8e-05	0.0045	16.6	0.7	1	23	958	981	958	981	0.94
7	17	0.51	34	4.5	3.6	2	23	989	1009	989	1009	0.96
8	17	1e-07	6.6e-06	25.6	2.1	2	23	1015	1036	1014	1036	0.97
9	17	6.1e-07	4e-05	23.1	0.1	1	23	1042	1064	1042	1064	0.99
10	17	0.00046	0.03	14.1	2.1	2	23	1076	1098	1075	1098	0.95
11	17	0.00074	0.048	13.4	1.6	1	23	1104	1127	1104	1127	0.96
12	17	0.0036	0.24	11.2	2.7	2	23	1149	1171	1148	1171	0.95
13	17	0.0067	0.44	10.4	0.7	2	23	1178	1200	1177	1200	0.96
14	17	2.8e-05	0.0018	17.9	1.0	2	23	1208	1229	1207	1229	0.96
15	17	0.0016	0.1	12.4	2.3	1	23	1235	1258	1235	1258	0.96
16	17	0.068	4.4	7.2	3.3	2	23	1265	1286	1264	1286	0.96
17	17	0.0078	0.51	10.2	1.8	1	23	1292	1314	1292	1314	0.98

Sequence Information

Coding Sequence: ATGAGTGGTTCAGAGGGAGGTATCATATACTTTGCCTATGAAAACGAGGATGGTGATGATGGGGCTACCACGATACCAGAGGTACCTGCAGATCAATCTGAAACTTTAGGTGATACAAACTTGAAACCAGATGAGCCCGACAGGGAAGATGTTAGAGAGGATGTGACAGAGAATATCACAGAGAATGTTACCGAGAGTGTAACAGAACACATTATAGAGACCATCACAGAGGATATCACTGAAAATGCAACGGACCACGATTACATCGAACTTATTCAGGGTAAAGAAATGGAGCAATTGCCAAACATGGAAGAGGGAACGATCATCATAATACAAGACAATGGAGACATTGAAGATGAAGGCTCCCACGTATCGGTTTCTAATTCAGTAGAACTTCCTCCAATTAAAGAACACTCTTTTTCACAAATAACGAACTTGTCTCAATTGAAAAAGGTCACTCCTCGAGTCAAGCTGCAAAGTCCCGAAAAACATTTAGTCAAGGGATTAGCAGAGCTaaggaatataaattttccaatacGCAATAAACATTCATTGAATCAAGCCAAACAGCAGTTGAAGAAATACTGTCGAACATGCGCGGGACTCAAACTTCCATTGGTAGATATATTTAGTGATAAAGGAATACAGATGCGATTGAATCAGCAAATGAAACATCTGGAAGAAATTAATCAGCACGGAAGTTTATCTACCCAGATGTGTATGGATTGTATttgcgatttgaaaatgagctacaaattttttatgcaaattaAAAAGGCTGAATTCAAACTAAAATCTATATACAACTCACTTAGCGAAAAGTCAGAAAATAATTGCACATCAAAGAACTTATCACCTGGCGAAGTAAGCCCAAACATCGCTTGGAATGATCCCActgtaaaaattgagaaagatGTGCATACATATGCTAATAAGAAAACTAGCTTTGTAAATGCAAAAAAAACTGGCCAGTTACCCAAGACATTgtcatttcatttatcaacTGAGATTAGTGATTCTGTTAAGTCACCTTTAATTAAACCCAAAGAGGAACCATTGGCAATTTCAGATGCCGAATGCACGACTGATATGTTTGAGGATGTTACAGATCTCAACCATAATGATGACAATGATTCTATTGAGGAATTTGATCCGGAGGATCTACCATTCCATCCCGATACCTCGGAATATGGAGAATCTAACGACGAACTTGAAGAACTTGGAGttcaaaaagcaaaaaaggcACGAATGATGCCAATGAATGAACAGCAAGAATTATCGTCGACTGCAGCGGTATATCACTATGACAATACGAAGAAAGCCTATGTTAAATATGAGGTTGGagaaagcaaagaaaatttacCCATCGACCTTAAAGATGTGGTCAAATCTGAAGCAGTTGATGGTGGGACGGATCCAAAAAAACAGCCAAACATCTTGAAAAGAAGGCTGTCCCTGCCCCTCAAATCAAAAACGGTCGTCGATTCTTTAGAAACCAGTCATTCAGCAGATTCAAATATCCCCACCAGTCCTGGAAAAACGTTGCAAAAATTGAGCATGAATCATCCGATTAGTATCGGGACTAAAGGCGAGGACGGCATTATGTATGTCACAGTAAAAGGATCAAAGCCAAATGAATTGCTTTTagtgaaagtgaaaaaaatggataagcCTGGGGAAAAAGTTGAGGAAGTTAACTTAGCTCATGCTGCTATCGACATGAAACCAGTAGACCGCAtgctgaaaaaatatgaggcactgaaaatgaaagaaaaaaatctgttttcAGACAAGTATAAAAAACCTGATATAAGGGAACAAATAATAGAAGAACAGATCGAAGAGTATAAACGAAGGCGAGAACAGGTGCTAGGTGGAAATATGATTGGTTTAACTAGTGCGATGAATAATGAGGATGGAtcatcaaaatttataaagaCGGAAAATAACTCAGGATATCATAGGCGATACACTCCACACAAAACCAGAGACAATGATGtcctaaaaataaaagaagaaccaGAATCTCTGGAGATTGTTCATGAAATAAGAATCAAGGAAGAGTGtactgaaatatttgaaaaacccACAGATCACAAATcatcgaaacaaaaacaagataCGAAATCAGATGAATATCTGGCTCGAATGGCTCACctcaaagaaaaatgggaagaagCCAAATCACAAAAAGAGTCCCTGCTAATGGAGctagaagaagagggaaaccAAGAAAAGTTGGAGAGAATTTTAGGGGAGAGAGAAGACGTTGACTTGGAGGAGTTTCAAGAATATCTGAAACAGAGAAATATTGCAATATCCAGACTGAAAGATCAGGACATAATTTCACTGTATGAAGATAGAAATAATGCGTACATAGGAGATCATCTTTTAGAAGGCAGCGAGGATGTTTCGACGATACATGCTATTCCTTTGGAAGATTACTTAGAGTGTGATTACTGCCCAGAAACCTTTCCCACCGATGTTATGCTTGAAGATCATCTAAAAAAGCACGATTATAGAATAATGCATTATTGCGAAGATTGTCTCACAGAATTTCCCacaaacaaagcaaaaaaaaatcacaatattACCTGCATGCAAAAAATGATATGTAAATATTGCGATTTAATGTTAGACTCcaaaggtaaaaaaagacAACACGAACAAAAACACTGCGACAATATGTATGGCCAACTCTGTGATACTTGCGGTGAAAAGTTCAAGCACCAGGGCACTCTTGATCAGCATATTAAAACACAGCACATGAGCTGGGAGAAGGTCTTCCAATGTCCCAAATGCCCCAAAAAATTTGcattcaaacaaaaattgacTTTTCACCTGAAATCTGTCCACACCACACTAAGGGCATATTTATGTGAAGACTGCGGAGCTGATTTCAAAAATCCAGCAAGTCTACGGCATCACAGGATTCGCAAACATCAGCCTGTTGGTAACAAAAGAGAATGTTCGGTTTGCCATAAAATGGTTCCATTTTACAGCCTGTCCAAGCATATGCATACGCACAAGGCTTATACTATACAATGTCCACATTGTGATAAAATGTTCAAGAATAGTTCCACACTGAAACAACATGTTAGAATTCATGAAGACCAAAGACAATACAGATGTGACATTTGCGGGGTAGGATTCAATCGACGAGATGGTCTAAGATTGCACATGAGAGTGCATGAAAAAACTGATAGTCGAGGGTTGAAAGAGTGTTCATGCCAAGtatgcggtgaaaaattcccTAATCATTCTATGCTGGTAATTCACAGAAACAGGGTTCATAAGGACGGAAGACAGTATACTTGTCATATTTGTAATAGATCAATGATCTCACCACGGTCCTTGGAATGGCACATGTCTCACATTCACAACCAAGCGCTTCCTGGAGAAATGCAAGCGGACTCAGAAGTTCCTCAAGTGAAGAAAAGAGTAACGTGTTATCACTGTGACAAAACATTCAAAACTGAAATGATTTTAAGAACACATATCAAGAACACACATGTCGAAAAAGATCCAATGAAATGTGCAGAATGTGATCAACTCTTTACTTCAGATGTGAGACTCAGACATCATATGATGGTAATCCACAATAGATTGGAGGGAACATTGCCATGCCCGCATTGTCCAAAACGATTTGTGAATCAATTGAGATTAAAAACACACATGATATCTCATTCTGAGGAGAGACCGTACACGTGTGAAGTATGTggatttaatttgaaaactaaaatcCAATTAATCAAACACCACCAAAATAGACATAGTGACGAACGGCCGTTACAATGCAAGTATTGTCCCTGGAGGTGTAAGCAGGTGAGCGCTCTTGTCTGTCACGAAAGAACGCACACAAATGAACGACCATACGCCTGCAGCGTTTGCAGGCAAAGATTTAAATATCTTGGGGACAAGAACAAGCACGAAAGAAGGCACGAGAGCCTAGGGGGTTCTGGATTTAAGAGAATAGTCACCGGTCGAAATACCAAGCAACCAAGGATACAAACAGAGATGCTTACTTCAGGTTCTGAACACGATCAAGAAGAATATGGGCAAATACAAGTTCAATACCAGAACGAGGGTCAATATGAAGAACAGACTGAGGATCAGTACGAAGATGACCAACAGGTCACGAAATTTGAACCGCAAGAAATTGAAGCCGAATACGAACAATCTTATGATCAGGATTACGAGACATCCAGGGAAGCTTCAGAAGCAGCAGAGGTGATAATGAGTATGGAAGATACGACCGTGTATACCGAAGAAGTAACTGCAGATGACATGGAATCAACAGAGATTATAACTGATGAAATCACGAACCAAATATTCCAAACCGGTACAGTCGTGCATTTGGAGCAGCAAGACGATTCTGGTAAAATACAAGTTTTTCCTGTAATGCTTTCCCTGCCAGATCTAACAGATGCGAACTCAGAGGTCAATCTTGCGACAGCATCTATTATGTACAAtacttaa
Protein Sequence: MSGSEGGIIYFAYENEDGDDGATTIPEVPADQSETLGDTNLKPDEPDREDVREDVTENITENVTESVTEHIIETITEDITENATDHDYIELIQGKEMEQLPNMEEGTIIIIQDNGDIEDEGSHVSVSNSVELPPIKEHSFSQITNLSQLKKVTPRVKLQSPEKHLVKGLAELRNINFPIRNKHSLNQAKQQLKKYCRTCAGLKLPLVDIFSDKGIQMRLNQQMKHLEEINQHGSLSTQMCMDCICDLKMSYKFFMQIKKAEFKLKSIYNSLSEKSENNCTSKNLSPGEVSPNIAWNDPTVKIEKDVHTYANKKTSFVNAKKTGQLPKTLSFHLSTEISDSVKSPLIKPKEEPLAISDAECTTDMFEDVTDLNHNDDNDSIEEFDPEDLPFHPDTSEYGESNDELEELGVQKAKKARMMPMNEQQELSSTAAVYHYDNTKKAYVKYEVGESKENLPIDLKDVVKSEAVDGGTDPKKQPNILKRRLSLPLKSKTVVDSLETSHSADSNIPTSPGKTLQKLSMNHPISIGTKGEDGIMYVTVKGSKPNELLLVKVKKMDKPGEKVEEVNLAHAAIDMKPVDRMLKKYEALKMKEKNLFSDKYKKPDIREQIIEEQIEEYKRRREQVLGGNMIGLTSAMNNEDGSSKFIKTENNSGYHRRYTPHKTRDNDVLKIKEEPESLEIVHEIRIKEECTEIFEKPTDHKSSKQKQDTKSDEYLARMAHLKEKWEEAKSQKESLLMELEEEGNQEKLERILGEREDVDLEEFQEYLKQRNIAISRLKDQDIISLYEDRNNAYIGDHLLEGSEDVSTIHAIPLEDYLECDYCPETFPTDVMLEDHLKKHDYRIMHYCEDCLTEFPTNKAKKNHNITCMQKMICKYCDLMLDSKGKKRQHEQKHCDNMYGQLCDTCGEKFKHQGTLDQHIKTQHMSWEKVFQCPKCPKKFAFKQKLTFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECSVCHKMVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDICGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISPRSLEWHMSHIHNQALPGEMQADSEVPQVKKRVTCYHCDKTFKTEMILRTHIKNTHVEKDPMKCAECDQLFTSDVRLRHHMMVIHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYTCEVCGFNLKTKIQLIKHHQNRHSDERPLQCKYCPWRCKQVSALVCHERTHTNERPYACSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVTGRNTKQPRIQTEMLTSGSEHDQEEYGQIQVQYQNEGQYEEQTEDQYEDDQQVTKFEPQEIEAEYEQSYDQDYETSREASEAAEVIMSMEDTTVYTEEVTADDMESTEIITDEITNQIFQTGTVVHLEQQDDSGKIQVFPVMLSLPDLTDANSEVNLATASIMYNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00175253;
90% Identity: iTF_00175253;
80% Identity: -