Basic Information

Insect: Athalia cordata
Gene Symbol: -
Assembly: GCA_963932425.1
Location: OZ010627.1:31630816-31635389[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0012 0.1 13.2 0.1 2 23 822 843 821 843 0.97

2 17 1.1 88 3.9 0.7 1 19 849 867 849 870 0.90

3 17 0.53 44 4.8 1.0 3 23 877 897 875 897 0.96

4 17 0.00017 0.014 15.9 1.8 3 23 906 927 905 927 0.98

5 17 0.0015 0.13 12.8 2.2 1 23 934 957 934 957 0.96

6 17 9.4e-05 0.0078 16.6 0.7 1 23 963 986 963 986 0.94

7 17 6.6 5.5e+02 1.4 2.8 3 23 995 1014 994 1014 0.89

8 17 1.4e-07 1.1e-05 25.6 2.1 2 23 1020 1041 1019 1041 0.97

9 17 8.4e-07 7e-05 23.1 0.1 1 23 1047 1069 1047 1069 0.99

10 17 0.00063 0.052 14.0 2.1 2 23 1081 1103 1080 1103 0.95

11 17 0.001 0.085 13.4 1.6 1 23 1109 1132 1109 1132 0.96

12 17 0.005 0.41 11.2 2.7 2 23 1154 1176 1153 1176 0.95

13 17 0.0093 0.77 10.4 0.7 2 23 1183 1205 1182 1205 0.96

14 17 3.8e-05 0.0032 17.9 1.0 2 23 1213 1234 1212 1234 0.96

15 17 0.0022 0.18 12.4 2.3 1 23 1240 1263 1240 1263 0.96

16 17 0.093 7.7 7.2 3.3 2 23 1270 1291 1269 1291 0.96

17 17 0.011 0.89 10.2 1.8 1 23 1297 1319 1297 1319 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0012	0.1	13.2	0.1	2	23	822	843	821	843	0.97
2	17	1.1	88	3.9	0.7	1	19	849	867	849	870	0.90
3	17	0.53	44	4.8	1.0	3	23	877	897	875	897	0.96
4	17	0.00017	0.014	15.9	1.8	3	23	906	927	905	927	0.98
5	17	0.0015	0.13	12.8	2.2	1	23	934	957	934	957	0.96
6	17	9.4e-05	0.0078	16.6	0.7	1	23	963	986	963	986	0.94
7	17	6.6	5.5e+02	1.4	2.8	3	23	995	1014	994	1014	0.89
8	17	1.4e-07	1.1e-05	25.6	2.1	2	23	1020	1041	1019	1041	0.97
9	17	8.4e-07	7e-05	23.1	0.1	1	23	1047	1069	1047	1069	0.99
10	17	0.00063	0.052	14.0	2.1	2	23	1081	1103	1080	1103	0.95
11	17	0.001	0.085	13.4	1.6	1	23	1109	1132	1109	1132	0.96
12	17	0.005	0.41	11.2	2.7	2	23	1154	1176	1153	1176	0.95
13	17	0.0093	0.77	10.4	0.7	2	23	1183	1205	1182	1205	0.96
14	17	3.8e-05	0.0032	17.9	1.0	2	23	1213	1234	1212	1234	0.96
15	17	0.0022	0.18	12.4	2.3	1	23	1240	1263	1240	1263	0.96
16	17	0.093	7.7	7.2	3.3	2	23	1270	1291	1269	1291	0.96
17	17	0.011	0.89	10.2	1.8	1	23	1297	1319	1297	1319	0.98

Sequence Information

Coding Sequence: ATGAGTGGTTCAGAGGGAGGTATCATATACTTCGCCTATGAAAACGAGGATGGTGATGATGAGGCTACCATGATACCAGAGGTACCTGCAGATCAATCTGAAACTTTAGGTGATACAAACTTGAAACCAGATGAGCCCGACAGGGAAGATGTCAGAGAGGATGTGACGGAGAGTGTCACGGAGAATGTTACGGAGAGTGTCACTGAGGATGTTACGGAGAGTGTCACAGAACATATTATAGAGAGCATCACAGAGAATATCGCTGAGAATGCAACGGACCATGATTACATTGAACTCATTCAAAGTAAAGAAATGGAGCAATTACCAAACATGGAAGAGGGAACGATCATCATAATACAGGAGGAAGGAGGCGTAGAAGGTGAAGGCTCCCACGTATCGGTTTCTACGTCAGCGGAACTTCCTACAATCAAAAAAGAGTCTTTTTCGCAAATAACGAACTTATCTCAATTGAAGAAAGTCACTCCTCGAGTCAAGCTGCAAAGTCCTGAAAAAAACTTAGTCAAGGGATTAGCAGAgcttaaaaatatgaattttccaATACGCAACAAACAGTCATTGAATCAAGCCAAACAgcagttgaaaaaatactGTCGTACATGCGCGGGACTCAAACTTCCATTGGTAGATATATTTAGTGATAAAGGAATACAGATGCGATTGAATCAGCAGATGAAACATCTGGAGGACATTAATCAGCAGGGAAGTTTATCTACCCAGATGTGTATGGATTGTATTTGCGATTTGAAAAtgagttacaaattttttatgcaaattaAAAAAGCTGAATTTAAACTAAAATCTATATACAACTCACTCAGCGAAAATGATAGCACATCAAAAAACTTATCACCTGGTGAAGTAAGCCCAAATATTGCTTGGAATGATCCCACtgtaaaaattgagaaagatGTGCATACATATGCTAATAAGAAAACTAGCTTTgtaaatgcaaaaaaatttggccaaTTGCCAAAGAAATCGGTATTCCATTTATCAGCGGAGAATAGTGATCTTGTTAAGTCACCTTTAATTAAACCCAAAGAGGAACCATTGGCAGTTTCAGATAACGAATGCATGATTGATATGTTTGAGGATGTAACAGATCTCAACCGTAATGATGACAATGATTCTATTGAGGAATTTGATCCAGAGGATCCACCGTTCCATCCTGATACCTCTGAATATGGAGAATCTAATGACGAACTTGAAGAACTTGGAGTTCAAAAAGCAAAGAAGGCACGGATGATGCCAATGAATGAACAGCCAGAATTTTCGACGACCCCAGCGGTATATCACTATGATAACACAAAAAAAGCCTATGTTAAATATGAGGTTGgagaaagcaaagaaaatttaCCTGTTGAGCTTAAAGACTTGATCAAATCTGAAGCAGTTGATGGGGGGACAGATCcgaaaaaacaaccaaataTTTTGAAGAGAAGGCTGTCCTTGCCCCTCAAATCAAAAGCAGTTGTGGATGCTTTGGAAACCAGTCATTCAGCGGATTCAAATAACTCCACCGGTCCTGAAAAAACTTTACAAAAATTAAGCATGAATCATCCAATTAGTATTGGGACTAAAGGCGAGGATGGCATTATGTATGTCACAGTCAAAGGATCAAAGCCTAATGAATTGCTTttagtgaaagtgaaaaaaatggacaagCCTGGGGAAAAAGTTGAGGAAGCAAACTTAGCTCATGCTGCTATCGACATGAAACCTGTAGACCGAATGCTGAAAAAATATGAGGCACTGAAgatgaaagagaagaatcTGTTTTCAGACAAGTATAAAAAACCTGATATAAGGGAACAAATAATAGAAGAACAGATCGAAGAGTATAAGCGGAGGCGAGAACAGGTGTTAGGTGGAAATATGATTGGATTAACTAGTGCAATGAATAATGAAGATGGATCATCGAAGCTTAcaagaacagaaaataattccgGATATCATAGGCGATACGCTcaacaaaaaatcagagaCAATGATAtcctaaaaataaaagaagaaccaGAATCTCTGGAAATCGTACATGAAATAAGAATCAAGGAAGAGTGTACTGAAATAGGTGAAAATTCTACAGAACACAagtcatcgaaaaaaaaacaagatacacAGCCAGATGAATATCTAGCTCAATTGGCCCACCTCaaagaaaaatgggaagaagctaaattgaaaaaagaagtccTGCTATCGGAACTGGAAGAAGAGGGAAACCAAGAAAAGTTGGAAAGAGTTTTAGGGGAGAGAGAAGACGTTAACTTGGAGGAGTTTCAAGAATATCTGAAACAGAGAAATATAACAATTTCTAGACTGAAAGATCAGGACATAATTTCGCTGtacgaaaatagaaataatgtgCACATAGGAGACCAGCTTTTAGAAGAGAGCTTGGATGTTCCGACGGCGCCTGCTATTCCTTTGGAAGATTACTTGGAATGTGATTACTGCCTAGAAACCTTTCCAGATGAAGCTATGCTTGAAGATCATCTGAAGAAACACGATTATAGAATAATGCATTACTGCGAAGATTGTCTCACAGAATTTCCGACtaacaaagcaaaaaaaaatcacaatatCACCTGCATGCAAAAAATGATATGCAAATATTGCGATTTGATGTTGGACTccaaaggtaaaaaaagacaacatgAACAGAAACACTGCGACAATATGTACGGCCAACTCTGTGATACCTGCGGTGAAAAGTTCAAGCACCAAGGCACACTTGATCAGCATATTAAAACACAGCACATGAGCTGGGAGAAGGTTTTTCAATGTCCAAAATGCCCCAAGAAATTTGcattcaaacaaaaattgacTTTCCATCTGAAATCTGTCCACACTACGCTAAGGGCGTATTTATGTGAAGACTGCGGAgccgattttaaaaatccagCAAGTTTACGGCATCACAGGATTCGCAAACATCAGCCGGTTGGTAACAAAAGAGAATGTGGGGTTTGCCATAAATTGGTTCCATTTTACAGCCTGTCCAAGCATATGCATACGCACAAGGCTTACACTATACAATGTCCACATTGTGATAAAATGTTCAAGAATAGTTCGACACTGAAACAACATGTAAGAATTCATGAAGACCAAAGACAGTACAGATGTGACATTTGCGGGGTAGGATTCAATCGACGAGATGGTCTTAGATTGCACATGAGAGTGCATGAAAAAACGGATAGTCGAGGGTTGAAAGAATGTTCATGCCAAGTATGCGGTGAAAAATTCCCCAATCATTCTATGCTGGTAATTCACAGAAACAGGGTCCATAAGGATGGAAGACAGTATACTTGCCATATTTGCAACAGGTCAATGATCTCCCCACGGTCCTTGGAATGGCACATGTCTCACATTCACAACCAAGCGCTTCCTGGAGAAATGCAAACGGATTCAGATGTTCCTCAAGTGAAGAAAAGAGTGACATGTTATCACTGTGACAAAACATTCAAAACTGAAATGATTTTAAGGACGCATATTAAGAATACGCACGTAGAAAAAGATCCAATGAAATGTGCAGAATGTGATCAACTCTTCACGTCAGATGTGAGACTCAGACATCATATGATGGTGATCCACAACAGATTGGAGGGAACATTGCCATGCCCACATTGCCCGAAACGATTTGTAAATCAATTGAGATTAAAAACACACATGATATCTCATTCTGAGGAGAGACCGTACACGTGTGAAGTATGTggatttaatttgaaaactaaaatCCAATTGATCAAACACCACCAAAATAGACATAGTGACGAACGGCCGTTACAATGTAAGTATTGTCCTTGGAGATGTAAGCAGGTCAGCGCTCTTGTCTGTCACGAAAGAACGCATACGAACGAACGGCCGTACGCCTGCAGCGTTTGCAGACAAAGATTCAAATATCTTGGGGACAAGAACAAGCACGAGAGAAGGCACGAGAGTCTAGGGGGTTCTGGATTCAAGAGAATAGTCACCGGTCGAAATACCAAGCAACCAAGGATACAAACAGAGACGTTTACTTCAGGTTCTGACCACGATCAAgaagaatatgatcaaatacaAGTTCAATATGAGACCGAGGGTCAATATGAAGAACAGACTGAGGATCAGTACGAAGATGACCAACAGGTCACTAAATTTGAACCGCAAGAAATTGAAGGCGAATACGAACAATCTTATGATCAGgaTTACGAGACCTCCAGGGAAGCTTCAGAAGCAGCAGAGGTGATAATGAGTATGGAAGATACAACTGTGTATACGGAAGAAGTAACTGCAGATAATATGGAATCAACAGAGATTATAACTGATGAAATCACGAACCAAATATTCCAATCTGGTACAGTCGTGCATTTGGAGCAGCAAGACGATTCTGGCAAAATACAAGTGTTTCCTGTTATGCTGTCCTTGCCAGATCTAACAGATGCAAACTCAGAGGTCAATCTTGCTACAGCATCTATTATGTACAATgcttaa
Protein Sequence: MSGSEGGIIYFAYENEDGDDEATMIPEVPADQSETLGDTNLKPDEPDREDVREDVTESVTENVTESVTEDVTESVTEHIIESITENIAENATDHDYIELIQSKEMEQLPNMEEGTIIIIQEEGGVEGEGSHVSVSTSAELPTIKKESFSQITNLSQLKKVTPRVKLQSPEKNLVKGLAELKNMNFPIRNKQSLNQAKQQLKKYCRTCAGLKLPLVDIFSDKGIQMRLNQQMKHLEDINQQGSLSTQMCMDCICDLKMSYKFFMQIKKAEFKLKSIYNSLSENDSTSKNLSPGEVSPNIAWNDPTVKIEKDVHTYANKKTSFVNAKKFGQLPKKSVFHLSAENSDLVKSPLIKPKEEPLAVSDNECMIDMFEDVTDLNRNDDNDSIEEFDPEDPPFHPDTSEYGESNDELEELGVQKAKKARMMPMNEQPEFSTTPAVYHYDNTKKAYVKYEVGESKENLPVELKDLIKSEAVDGGTDPKKQPNILKRRLSLPLKSKAVVDALETSHSADSNNSTGPEKTLQKLSMNHPISIGTKGEDGIMYVTVKGSKPNELLLVKVKKMDKPGEKVEEANLAHAAIDMKPVDRMLKKYEALKMKEKNLFSDKYKKPDIREQIIEEQIEEYKRRREQVLGGNMIGLTSAMNNEDGSSKLTRTENNSGYHRRYAQQKIRDNDILKIKEEPESLEIVHEIRIKEECTEIGENSTEHKSSKKKQDTQPDEYLAQLAHLKEKWEEAKLKKEVLLSELEEEGNQEKLERVLGEREDVNLEEFQEYLKQRNITISRLKDQDIISLYENRNNVHIGDQLLEESLDVPTAPAIPLEDYLECDYCLETFPDEAMLEDHLKKHDYRIMHYCEDCLTEFPTNKAKKNHNITCMQKMICKYCDLMLDSKGKKRQHEQKHCDNMYGQLCDTCGEKFKHQGTLDQHIKTQHMSWEKVFQCPKCPKKFAFKQKLTFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECGVCHKLVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDICGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISPRSLEWHMSHIHNQALPGEMQTDSDVPQVKKRVTCYHCDKTFKTEMILRTHIKNTHVEKDPMKCAECDQLFTSDVRLRHHMMVIHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYTCEVCGFNLKTKIQLIKHHQNRHSDERPLQCKYCPWRCKQVSALVCHERTHTNERPYACSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVTGRNTKQPRIQTETFTSGSDHDQEEYDQIQVQYETEGQYEEQTEDQYEDDQQVTKFEPQEIEGEYEQSYDQDYETSREASEAAEVIMSMEDTTVYTEEVTADNMESTEIITDEITNQIFQSGTVVHLEQQDDSGKIQVFPVMLSLPDLTDANSEVNLATASIMYNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00175910; iTF_00174508;
90% Identity: iTF_00175910; iTF_00174508;
80% Identity: -