Aros007505.1
Basic Information
- Insect
- Athalia rosae
- Gene Symbol
- -
- Assembly
- GCA_000344095.2
- Location
- NW:320892-323556[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.3 1.8e+03 -1.7 0.1 18 27 119 128 114 147 0.71 2 12 0.0083 11 5.4 0.2 18 28 149 159 126 174 0.87 3 12 0.024 31 4.0 1.8 18 39 177 195 166 202 0.81 4 12 2.1e-05 0.028 13.7 2.7 15 39 212 237 205 240 0.86 5 12 0.01 14 5.1 0.8 17 40 241 261 238 264 0.87 6 12 0.077 1e+02 2.3 1.9 15 28 266 279 258 290 0.80 7 12 0.00026 0.34 10.2 1.3 12 39 291 315 283 331 0.84 8 12 0.0027 3.6 7.0 0.5 14 38 369 390 364 398 0.83 9 12 0.00047 0.62 9.4 0.9 15 40 408 430 397 435 0.76 10 12 0.0016 2.1 7.7 0.9 5 37 427 454 423 459 0.76 11 12 0.00028 0.37 10.1 1.9 17 37 465 482 458 487 0.76 12 12 0.0012 1.5 8.1 3.3 5 39 482 512 478 515 0.83
Sequence Information
- Coding Sequence
- ATGGATCGCGAGGAGAATGTATTGTTCAACGGCGTTGATGGAATGATACAAATCATTGGAGAGGCATCGCCCAAAGATATATCTTCCTTGAAGGGATTCCTCGATTATGTTGAGACCATATCGAAACCAGATGATAAATCAAAGGCTCGAAATTCGATAAAGATAGAAGGCGCTGCCACCGAGCTCGGAATGACCGGTAAATTTATCGACATCAATCTGACAGATTTGATGAAGAAGGACACTATGACAAAATCTTCGATACAGTACGTAGCTCTCCCAGAGACGCAGAATTTCTTCAACGGGGAAAATGTGGAAGTGGAATGGAAGGTAAACGAGGATAACGAGAGTCCCTACCGATGCGCTATCTGTCAGGTCCAATTTTTCAGCCGAGTTTCTTTGGACAGACACATTGTAGACTTGCATTTGGGTACGACGGGGAGGTTCCTATGCGACATTTGTCACAAGGAGTTTTCCCGCGTGTTCGATTTAGCCAGGCACAAATTGATACACTCCGGTGTAAAGCCGTTCCAATGCAGTACCTGTCAAAAGCAGTTTTCCAGACAGGATCATTTGAAGCAGCATATTTTGAGCCATTCGCAGTGCTCCGAGGGCGAGTTTTTCGGCTTTGAGAACGGTCTGAACAAGTGTACCATTTGTCACAAGCAATTATCGCGTCCCCAGCACCTTCGGACTCACATGCGTCAACATCTGGGTACCCTGTTCGAGTGCGACAAATGCAGCAAAAGATTTTCTCGCGCGTCTCACCTCAGAGCGCACATGCGTCTCCACCTCGGTACGTGTTTTCGCTGCAGTGTTTGTCAAAAAGAATTTTCCCGCCCCTCGGATTTGGATCGTCACAAGCTCACGCACTTGGACAAAAAGCTTTTCGAGTGTCCTACGTgtcagaaaaaattctctcgcaAAGACAATCTGAAAAAGCACATGCTTTCCCACGTGGACTCGGTACCCGCCGATCACGAGATCCAAAACCACGTCAGATTTTCCATGAATCTGAGCGAAGAAATCGACGGTGGTTTGCCCTCGAATCCGGGGAGCTCCGAACCGAATTTCGAGGGGACCACGTGCGCGCACAATAATTGGTCGGAGAAAAAGTTCGAGTGCGCGGTTTGCGAGAAACGTTTCAACAGAAAGGTCCGGTTAAAGGAGCACGTTCGGATccacgtagagaaaaaattgtcctTCGACGATCGCGAGAACAAGGATCAAAATAAATGTGGTATTTGCAGCAAGCAGTTATCGCGACCGGAACACCTCAAAGCTCACATGCGTCTGCATCTCGGTACACTTTTCAAATGCGAGACGTGCGAAAAAGAATTCTCTCGATCCTCCGATTTGGAACGTCACAAATTAGTCCACTCCGGTCTCAAACAATTCATATGCATTATTTGCCACAAGCAATTCTCGCGTAAAGATTACTTGAAAAATCACATGCTCTCGCACGccaataaaaaatcattcgaatgtGACAAATGCAAGAAGCGATTCACCTATTTCACAAACTTGAGAAATCACCTTCATCTTCACTTAGGAcagtaa
- Protein Sequence
- MDREENVLFNGVDGMIQIIGEASPKDISSLKGFLDYVETISKPDDKSKARNSIKIEGAATELGMTGKFIDINLTDLMKKDTMTKSSIQYVALPETQNFFNGENVEVEWKVNEDNESPYRCAICQVQFFSRVSLDRHIVDLHLGTTGRFLCDICHKEFSRVFDLARHKLIHSGVKPFQCSTCQKQFSRQDHLKQHILSHSQCSEGEFFGFENGLNKCTICHKQLSRPQHLRTHMRQHLGTLFECDKCSKRFSRASHLRAHMRLHLGTCFRCSVCQKEFSRPSDLDRHKLTHLDKKLFECPTCQKKFSRKDNLKKHMLSHVDSVPADHEIQNHVRFSMNLSEEIDGGLPSNPGSSEPNFEGTTCAHNNWSEKKFECAVCEKRFNRKVRLKEHVRIHVEKKLSFDDRENKDQNKCGICSKQLSRPEHLKAHMRLHLGTLFKCETCEKEFSRSSDLERHKLVHSGLKQFICIICHKQFSRKDYLKNHMLSHANKKSFECDKCKKRFTYFTNLRNHLHLHLGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00175211;
- 90% Identity
- iTF_00175211;
- 80% Identity
- iTF_00175893;