Acor013643.1
Basic Information
- Insect
- Athalia cordata
- Gene Symbol
- -
- Assembly
- GCA_963932425.1
- Location
- OZ010628.1:1481822-1483600[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 2.1 3.5e+03 -1.9 0.2 18 26 119 127 114 142 0.69 2 10 0.0025 4.2 7.5 0.3 16 28 147 159 126 171 0.86 3 10 0.038 63 3.7 2.1 18 39 177 195 165 202 0.81 4 10 0.0052 8.6 6.5 10.5 15 39 212 237 205 264 0.86 5 10 0.0092 15 5.7 1.3 15 28 266 279 258 286 0.80 6 10 0.00033 0.55 10.3 1.1 12 39 291 315 283 331 0.84 7 10 0.001 1.7 8.8 0.9 14 38 368 389 362 397 0.83 8 10 0.0034 5.6 7.1 5.1 11 40 402 428 385 457 0.82 9 10 0.00051 0.85 9.7 2.4 17 37 463 480 453 486 0.78 10 10 0.0017 2.8 8.1 3.3 5 39 480 510 476 513 0.83
Sequence Information
- Coding Sequence
- ATGGATCGCGAGgaGAATGTATTGTTTAACGGCGTCGATGGAATGATACAAATTGCTGGAGAGGCATCACACAAGGATATATCTTCCTTGAAGGGATTCCTCGATTATGTTGAGACCATATCGAAGTCTGATGATAAATCAAAGGCTCAAAATTCCATTAAAATAGAAGGTGCCACCCCCGAGCTTGGAATGACTaccaaatttattgatattaaTCTCACAGATTTGatgaaaaaggaaacaatgACAAAATCTTCGATTCAGTACGTAGCTCTCCCAGAAACACAGAATCTCTTTAACGGAGGAAATATCGAAGTGGAATGGAAGGTAAACGAGGATAATGAGAGTCCTTACCGATGTGCAATTTGTCAGGTCCAATTTTTTAGCAGAGTTTCATTGGACAGACACATCGTAGACTTGCATTTGGGTACAATGGGGAGATTTCGATGCGATATTTGTCACAAAGAATTTTCTCGCGTGTTCGATTTAGCCAGGCACAAATTAATACACTCCGGTGTAAAGCCATTCCAATGTAGCACCTgtcaaaaacaattttccagACAGGATCATTTAAAGCAGCATATTTTGAGCCATTCGCAATGTTCCGAGAGCGAGTTTTTCGGCTTCGAGAATGGTTTGAACAAGTGTACCATATGTCACAAACAATTATCGCGTCCCCAGCATCTCCGGACTCACATGCGTCAACATTTAGGTACCCTATTCGAGTGTGACAAGTGTAACAAAAGATTTTCTCGTGCGTCTCATTTAAGAGCGCACATGCGTCTCCACCTCGGTACGTGTTTTCGTTGCGGTATTTgtcaaaaagaattttctcgcCCCTCAGATTTGGACCGTCACAAGCTGACGCACTTGGATAAAAAGCTTTTCGAGTGTCCTACgtgtcaaaaaaaattctctcgtaAAGACAACTTAAAAAAGCACATGCTTTCCCACGTCGACTCCGTACCTGCCGATCACGAGATCCAAAACCACGTTAGATTCAACATAAATTTAAACGAAGAAGCTGACAGTTTGCCTTTGAGTTCGGGTAGCCCTGAATTGATCTTCGAGCCGAATACATGCGCGCATAATAATTGGTCGGAGAAAAAGTTCGAGTGCGCAATTTGCGAGAAACGTTTCAATAGAAAAGTTCGATTAAAAGAGCATGTTCGTATacacgtggaaaaaaaattatcattcgacGATCGAGACAAGGATCAAAATAAATGCGGTGTTTGTAACAAGCAGTTATCGCGTCCTGAACACCTTAAAGCTCACATGCGACTGCATCTCGGTACACTTTTCAAATGCGAAACATgcgaaaaagaattttctcgaTTGTCAGATTTGGAACGTCACAAATTAGTTCACTCTGGTCTCAAACAATTCATATGTATTATTTGCCACAAGCAATTCTCGCGGAAAGATTACTTGAAAAATCACATGCTTTCGCACGCCAATAAAAAGTCCTTCGAATGTGACAAATGCAAAAAGCGATTTACATATTTTACGAACTTGAGAAATCACCTTCATCTTCACCTAGGacaataa
- Protein Sequence
- MDREENVLFNGVDGMIQIAGEASHKDISSLKGFLDYVETISKSDDKSKAQNSIKIEGATPELGMTTKFIDINLTDLMKKETMTKSSIQYVALPETQNLFNGGNIEVEWKVNEDNESPYRCAICQVQFFSRVSLDRHIVDLHLGTMGRFRCDICHKEFSRVFDLARHKLIHSGVKPFQCSTCQKQFSRQDHLKQHILSHSQCSESEFFGFENGLNKCTICHKQLSRPQHLRTHMRQHLGTLFECDKCNKRFSRASHLRAHMRLHLGTCFRCGICQKEFSRPSDLDRHKLTHLDKKLFECPTCQKKFSRKDNLKKHMLSHVDSVPADHEIQNHVRFNINLNEEADSLPLSSGSPELIFEPNTCAHNNWSEKKFECAICEKRFNRKVRLKEHVRIHVEKKLSFDDRDKDQNKCGVCNKQLSRPEHLKAHMRLHLGTLFKCETCEKEFSRLSDLERHKLVHSGLKQFICIICHKQFSRKDYLKNHMLSHANKKSFECDKCKKRFTYFTNLRNHLHLHLGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00174479; iTF_00175228; iTF_00174463; iTF_00175893; iTF_00175881;
- 90% Identity
- iTF_00174479; iTF_00175228; iTF_00174463; iTF_00175893; iTF_00175881;
- 80% Identity
- iTF_00175228;