Basic Information

Insect: Athalia rosae
Gene Symbol: bab2
Assembly: GCA_000344095.2
Location: NW:954557-975873[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 9.5e-13 1.7e-09 36.5 0.0 1 39 365 404 365 408 0.90

2 4 1.3e-12 2.2e-09 36.1 0.1 2 39 420 457 419 460 0.94

3 4 1.7e-19 2.9e-16 58.2 0.0 1 45 474 519 474 519 0.97

4 4 4.8e-19 8.5e-16 56.7 0.0 1 42 526 568 526 569 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	9.5e-13	1.7e-09	36.5	0.0	1	39	365	404	365	408	0.90
2	4	1.3e-12	2.2e-09	36.1	0.1	2	39	420	457	419	460	0.94
3	4	1.7e-19	2.9e-16	58.2	0.0	1	45	474	519	474	519	0.97
4	4	4.8e-19	8.5e-16	56.7	0.0	1	42	526	568	526	569	0.96

Sequence Information

Coding Sequence: ATGGCGGGGCAGCACTACTGCCTTCGCTGGAACAATTACCAGTCGAATATGACGTCggtttttcatcaacttcttCAAACGGAAGCGTTCGTCGATGTTACGTTGGCTTGTAACGAGGCGTCTTTAAAAGCTCACAAGGTGGTACTGTCGGCGTGTAgttcgtattttcaaaaattattactttcgAATCCATGCAAACATCCGACGATCATCATGCCGCAGGACGTTTGCTTCACCGATCTCAAATTCATCATTGAATTTGTGTACAAGGGTGAAATAGACGTGTCGCAAGCTGAACTtcagTCCTTGCTGAAAACTGCGGATCAACTGAAGATAAAGGGCCTATGCGAAGTTCCCGAAAGCAGAGAGGGACCCCCTTCGGTTAGCTTAAGTTCTCCTCCCAGGGATCGAGATTCCGTCACACCTCGATTAAATTACACCAAATTGAGGAGACAGCATCATCCCAAGTACAAAAGGCCACGATTCGACGTTAGATCCGATTCTAGACTCTTCGACAAATATAAGGAAGAGGAAGCGGAAGGATTCGGTCGAGACGATAAAGAGAATCACAGGGACTGGCAGACCGAAGATGAAGAATTCGGCGAACCTACAATAGTCCTGGAATCGCGACAGAAGGATATAAACAACGGTAACACGAACAACAATAACGGTGAGATGTTTTGTCACACAGGAATGGGACATTACGGGCACCATACGGATCCAGGAGACGTTGATTTACCACCCGAAACTCAACCTACACCTCCCAGTGCTACTCTAGTCGGTACGACGATTACGCATTTGAGAGACCCTGACCACCAATCgacagAAATACAAAATTGTGACAgcgttaaaataaaatttgagacACTGCGCGCGATGGACTCGACGGACACGATAGATATAGATAGTCATATGTCAGATCGAGCTAGCGTCAGTTCAAAAACCGCCGGAGATAATGACAACATGATGATGATCACTCCAGAACTTCTTGGGCTCATGCCTTCAGGCAGTTCTGGCCACTCAGATGCCGGAGACAACGGGAGATCGCATTCCGGTCAGATAGGTTCGCACCATCACGGTTCGAAATCGTGGACGCAGGACGACATGGACGCAGCTCTCGATGCCCTCAGAAATCACGATATGAGCCTTACCAAAGCGTCAGCTACTTTCGGGATACCGTCCACGACATTGTGGCAACGAGCTCATCGCCTCGGTATCGACACACCAAAGAAAGATGGCCCCACAAAATCTTGGAGCGACGAAAGTTTGAATAACGCCCTAGAAGCTCTTCGAACGGGAACAATATCCGCTAATAAGGCGTCGAAAGCTTTCGGTATACCTTCGAGCACGCTGTACAAAATAGCAAGAAGAGAAGGTATCAGATTAGCGGCGCCTTTCAACGCAAGTCCGACTACCTGGTCACCTACGGATCTCGATAGAGCGTTGGAAGCCATCAGGTCGGGACAAACTTCTGTACAACGAGCTTCAACTGAATTCGGAATACCTACGGGAACGCTTTACGGAAGGTGTAAAAGAGAAGGAATCGAATTAAGCAGGAGTAATCCAACTCCTTGGAGCGAAGATGCTATGACAGAAGCTCTTGAGGCTGTTAGAATGGGTCAAATGAGTATCAATCAAGCCGCGATACACTATAACTTACCATATTCGTCGCTTTACGGGCGTTTTAAAAGATGTAAATACGAAGAGCCTGTAGGAAACGAAATGTCCCAGGACAGCAACAGCCTTCATTATCACAGCCCAAACCAAAACCATCCCTCTTCTGTTCCCGATCAAATGCCTTATCAGGGCAGCTGA
Protein Sequence: MAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFTDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPRDRDSVTPRLNYTKLRRQHHPKYKRPRFDVRSDSRLFDKYKEEEAEGFGRDDKENHRDWQTEDEEFGEPTIVLESRQKDINNGNTNNNNGEMFCHTGMGHYGHHTDPGDVDLPPETQPTPPSATLVGTTITHLRDPDHQSTEIQNCDSVKIKFETLRAMDSTDTIDIDSHMSDRASVSSKTAGDNDNMMMITPELLGLMPSGSSGHSDAGDNGRSHSGQIGSHHHGSKSWTQDDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPTDLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRMGQMSINQAAIHYNLPYSSLYGRFKRCKYEEPVGNEMSQDSNSLHYHSPNQNHPSSVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01413017;
80% Identity: iTF_00175847;