Aros007408.1
Basic Information
- Insect
- Athalia rosae
- Gene Symbol
- Usf1_2
- Assembly
- GCA_000344095.2
- Location
- NW:286094-289203[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.067 2.3e+02 1.3 0.0 11 38 138 166 137 172 0.83 2 2 3.1e-07 0.0011 18.3 0.3 17 46 217 246 214 250 0.93
Sequence Information
- Coding Sequence
- ATGGATATTTTGGAGCAGCATCTTGACCCACAAGATGtcagCGGATCGGCGATCAAGGATGACGAAAATGGCCTAGTGCTCGAAGAGGCAGAATTTGTTGATTGCGACGGCGAagGTGAAGCTGTGGGAGAGGATGGAATACGCTATCAAGAAGCGCTAGCTTACAGAGTAGTACAAGTCAACGGTGGAAATactggaaatgaaattgagcTTCCTGTAACACAGTCGGCAAACAATACTGTGCAGGTTTTGACTTCTCCTTTGAATGGACAGTTCTATGTTATTGGAAATGCCAATGAAGTCTTTACCACAGCTCAAACATCCAGATCACTTGCACCTAGAGCTACTGTTCAAATTGAAACACCGCGTAATGTTACAACCGGACTCAAAAAGAGGGATGATAGGCGGAGAGCGACGCACAATGAAGTTGAACGCCGACGTCGAGATAAGATTAATAACTGGATTGCAAAGCTTGGTAAAATTATCCCAGAGTGTAACAACACCGCAAATGGAAATGCCAATGTAAGTGGAGATGGAAAAGCAAACTACGAAACGCAGAGTAAAGGTGGAATTTTGGCAAAAGCCTGTGAATACATAAGCGAGTTACGAGCGGCTAACCAAGGCTTGGGGCAGTGTTTACgtgacaatgaaaaattgcgacaTGAAATAAATGCCTTAAAGCAATTAGTGACACAGTTAAAGCGTGAGAATGCTCAATTGAGATCACAGATCACTTCTCCTACTACTGGTTCTGACGTTATTCATCTCAGTCCTTAA
- Protein Sequence
- MDILEQHLDPQDVSGSAIKDDENGLVLEEAEFVDCDGEGEAVGEDGIRYQEALAYRVVQVNGGNTGNEIELPVTQSANNTVQVLTSPLNGQFYVIGNANEVFTTAQTSRSLAPRATVQIETPRNVTTGLKKRDDRRRATHNEVERRRRDKINNWIAKLGKIIPECNNTANGNANVSGDGKANYETQSKGGILAKACEYISELRAANQGLGQCLRDNEKLRHEINALKQLVTQLKRENAQLRSQITSPTTGSDVIHLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070773;
- 90% Identity
- iTF_01199851;
- 80% Identity
- iTF_00175475;