Acor001914.1
Basic Information
- Insect
- Athalia cordata
- Gene Symbol
- Sub1
- Assembly
- GCA_963932425.1
- Location
- OZ010625.1:23433112-23433651[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.22 4e+03 -2.6 0.1 29 37 35 43 32 43 0.79 2 2 4.6e-27 8.4e-23 79.7 0.1 1 52 56 108 56 108 0.97
Sequence Information
- Coding Sequence
- ATGCCCAAGTCCAAACAGTATGTAGAGTCGAGCAGTGACAGCAGTGACTCTGAGccaaaaactaaaaaaaaagtacccaAGAAGACTAAGCGAGAAAGTTCTGATGAAGAACCAGCACCaagcaaaaaaccaaaaaaggaaactaaaaAGGATGAGGATACCGTTTGGGATCTAGGAAGCAATCGGCAGGTGACTGTTCGAGAATTCAAAGGAAAACTATTTGTCGATATCAGAGAGATGTATTACGACAAAGATGGAGATGTTAAGCCTGGTAGAAAAGGAATCTGTATGAACATGGCCCAGTGGCGAAAGTTTATGGACATCGTCGCGGATGTTGATGAGGCAGCCAAGGCAAAGTGTTAA
- Protein Sequence
- MPKSKQYVESSSDSSDSEPKTKKKVPKKTKRESSDEEPAPSKKPKKETKKDEDTVWDLGSNRQVTVREFKGKLFVDIREMYYDKDGDVKPGRKGICMNMAQWRKFMDIVADVDEAAKAKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00174187; iTF_00175758;
- 90% Identity
- iTF_00174187; iTF_00175758;
- 80% Identity
- -