Acor013904.1
Basic Information
- Insect
- Athalia cordata
- Gene Symbol
- bab1
- Assembly
- GCA_963932425.1
- Location
- OZ010628.1:3953289-3960573[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.4e-18 1.1e-14 53.9 0.0 1 43 60 103 60 105 0.95 2 3 2.3 3e+03 -2.0 1.6 6 15 183 192 181 195 0.88 3 3 7.8 1e+04 -3.7 0.1 3 11 223 231 223 231 0.82
Sequence Information
- Coding Sequence
- ATGGAAActgCCAAGTGGTTGGAATCATCCCACGCTTGGCTCGGTGCCTCTACTTCCAATATAACGGCAGACAGCTACCAGTACCACGTTCAATCGATATGGCAGAAGTGTTGGAACACCAATCAGAGTCTTGTTCATCATGCTCGGTTCAGAGAAAGAGGACCCCTTAAATCATGGAGACCCGAAACTATGGCGGAAGCGATATTCAGCGTACTCAAGGAGGGCCTCTCTCTAAGCCAAGCGGCGAGGAAGTACGATATCCCCTATCCGACCTTCGTCCTGTACGCAAATCGCGTTCATAATATGCTTGGTCCCAGTGCGGACGGTGGAGCCGATCTTCGACCGAAGGGTCGCGGTAGACCGCAACGTATTCTCCTTGGTGTCTGGCCCGACGAACACATCAGAGGTGTGATTAGAGCTGTGGTATTTCGGGACGGTCAGTCCGCCCTAATCGCCAAAGAAGAACCAACATCGATGTACCCGAGTCTCGCGAATTACGCAGCTTGCAACGGACCCGAAGGCGCCGTTAGTCCAGGCGCCGCTGCAGCAGCCGCAGTGGCCGCCGTCGCCCAAGGAATCCGTCATCAAATGTGCAGTATGGTGGCCGCCGCTCATTCTCACCAACACGATATGATTGCGGGTACAAATCTTTCGGCAAATTTATCAACGAATATTCAAGCGGCTCTTCAGGCTCAACATAACAACGGTAACTCTCCGCTGAATTTAGGTCTGGCAAGTCCTGGTTCAGGACCACCAGAAAGTCCTATGGAAAGTCCTTTAGCGAGTCCTCTCGGTCTGGTTATGGACCCCGCGCATATTCCCGGTAGCGTAGAATTGGGAATCGGAGTAAGTGGTATGACTTACAATCCAGCAAGAAGCTTCGTAAGTCCACGTcccgaaaatttatttcaagaaGATATTGCGGATCTAGTCAAGAGCCCGCACTCCTTGAAGGATAAGGACAAAATACCTGTTAAACTTGAGCCCCTCCAGGCAGATTCAAGGTGCGAATAG
- Protein Sequence
- METAKWLESSHAWLGASTSNITADSYQYHVQSIWQKCWNTNQSLVHHARFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGQSALIAKEEPTSMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGIRHQMCSMVAAAHSHQHDMIAGTNLSANLSTNIQAALQAQHNNGNSPLNLGLASPGSGPPESPMESPLASPLGLVMDPAHIPGSVELGIGVSGMTYNPARSFVSPRPENLFQEDIADLVKSPHSLKDKDKIPVKLEPLQADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227880;
- 90% Identity
- iTF_00939445;
- 80% Identity
- iTF_00174087;