Acor003025.1
Basic Information
- Insect
- Athalia cordata
- Gene Symbol
- bab2
- Assembly
- GCA_963932425.1
- Location
- OZ010625.1:33465777-33476662[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3e-12 3e-09 36.5 0.0 1 39 378 417 378 421 0.90 2 4 3e-12 4e-09 36.1 0.1 2 39 433 470 432 473 0.94 3 4 4e-19 5.2e-16 58.1 0.0 1 45 487 532 487 532 0.97 4 4 1.2e-18 1.5e-15 56.6 0.0 1 42 539 581 539 582 0.96
Sequence Information
- Coding Sequence
- ATGCAGGACAGAAATTGGGGAACTCATTACAgTGGAGGGATGGCGGGGCAGCACTACTGCCTTCGCTGGAACAATTACCAGTCGAATATGACATCagtttttcatcaacttcTCCAAACAGAAGCATTTGTCGATGTTACATTGGCCTGTAACGAAGCTTCTCTAAAAGCTCACAAGGTTGTACTGTCGGCGTGTAGTTcgtattttcaaaagttattaCTTTCGAATCCATGCAAACATCCGACAATCATCATGCCGCAGGACGTGTGTTTCACCGATCTTAAATTCATCATTGAATTTGTGTACAAGGGTGAAATAGACGTGTCGCAAGCTGAACTtcagTCGTTGCTGAAAACTGCGGATCAATTGAAGATAAAGGGCCTATGTGAAGTACCTGAAAGTAGAGAGGGACCTCCTTCGGTTAGCTTAAGTTCTCCTCCAAGGGATCGAGATTCCGTGACGCCTCGTTTAAATTACACCAAATTGAGGAGACAGCATCATCCGAAGTACAAAAGGCCACGATTCGACGCTAGATCAGATTCTAGACTTTTTGACaaatataaagaagaagaagcggaaGAATTCGGTCGAGACGATAAAGAGAATCACAGGGACTGGCAGACCGAAGATGAAGAATTCGGCGAACCTACAATAGTCCTGGAATCGCGACAGAAGGATATAAACAACGGTAACACGAACAACAATAACGGTGAGATGTTTTGTCACACAGGAATGGGACATTACGGGCACCATACGGATCCAGGAGACGTTGATTTACCACCCGAAACTCAACCTACACCTCCCAGTGCTACTCTAGTCGGTACGACGATTACGCATTTGAGAGACCCTGACCACCAATcgacagAAATACAAAATTGTGACagcgttaaaataaaatttgagacACTGCGCGCGATGGACTCGACGGACACGATAGATATAGATAGTCATATGTCAGATCGAGCTAGCGTCAGTTCAAAAACCGCCGGAGATAATGACAACATGATGATGATCACTCCAGAGCTTCTTGGGCTCATGCCTTCAGGCAGTTCTGGACACTCAGATGCCGGAGACAACGGGAGATCGCATTCTGGTCAGATAGGTGCCCACCATCACGGTTCAAAATCGTGGACGCAGGACGACATGGACGCAGCTCTCGATGCCCTTAGAAATCACGATATGAGCCTCACCAAGGCATCAGCTACTTTTGGGATACCGTCTACGACATTGTGGCAGCGAGCTCATCGCCTTGGTATCGACACACCAAAGAAAGATGGTCCCACAAAATCTTGGAGCGACGAAAGTTTAAATAACGCCTTAGAAGCTCTCCGAACAGGAACAATATCTGCTAATAAGGCATCGAAAGCATTTGGTATACCTTCGAGCACGCTGTATAAAATAGCAAGAAGAGAAGGTATCAGATTAGCTGCGCCTTTCAATGCGAGTCCGACAACCTGGTCACCTACAGATCTCGACAGAGCGCTGGAAGCCATTAGGTCGGGACAAACTTCTGTACAACGAGCTTCAACTGAATTCGGTATACCTACGGGTACGCTTTACGGAAGGTGTAAAAGAGAAGGAATCGAATTAAGCAGGAGTAATCCAACTCCTTGGAGCGAAGATGCTATGACAGAAGCTCTTGAGGCTGTTAGAATGGGTCAAATGAGTATCAATCAAGCCGCGATACACTATAACTTACCGTATTCGTCGCTTTACGGGCGTTTTAAAAGATGTAAATACGAAGAGCCTGTAGGAAACGAAATGTCCCAGGACAGCAACAGCCTTCATTATCACAGCCCAAACCAAAACCATCCTTCTTCTGTTCCCGATCAAATGCCTTATCAGGGCAGCTGA
- Protein Sequence
- MQDRNWGTHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFTDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPRDRDSVTPRLNYTKLRRQHHPKYKRPRFDARSDSRLFDKYKEEEAEEFGRDDKENHRDWQTEDEEFGEPTIVLESRQKDINNGNTNNNNGEMFCHTGMGHYGHHTDPGDVDLPPETQPTPPSATLVGTTITHLRDPDHQSTEIQNCDSVKIKFETLRAMDSTDTIDIDSHMSDRASVSSKTAGDNDNMMMITPELLGLMPSGSSGHSDAGDNGRSHSGQIGAHHHGSKSWTQDDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPTDLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRMGQMSINQAAIHYNLPYSSLYGRFKRCKYEEPVGNEMSQDSNSLHYHSPNQNHPSSVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01413017;
- 80% Identity
- iTF_00175178;