Basic Information

Insect: Athalia circularis
Gene Symbol: -
Assembly: GCA_963978495.1
Location: OZ021697.1:3545058-3548636[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.014 1.5 9.8 4.7 1 23 108 131 108 131 0.97

2 13 0.011 1.1 10.3 4.6 2 23 261 283 261 283 0.91

3 13 0.00024 0.026 15.4 1.2 2 23 358 380 357 380 0.96

4 13 5.9 6.3e+02 1.6 7.6 3 23 468 489 467 489 0.95

5 13 3.2 3.4e+02 2.5 0.9 1 23 539 562 539 562 0.92

6 13 9.7e-06 0.001 19.8 0.1 3 23 611 632 610 632 0.95

7 13 0.00072 0.077 13.9 1.0 2 23 659 681 658 681 0.90

8 13 0.0078 0.83 10.7 3.6 2 23 726 748 725 748 0.96

9 13 0.1 11 7.1 4.2 3 23 763 784 761 784 0.92

10 13 8.3e-05 0.0089 16.9 0.4 2 23 831 853 831 853 0.96

11 13 0.057 6.1 8.0 0.8 1 23 932 954 932 954 0.98

12 13 0.00011 0.011 16.5 0.3 2 23 971 993 970 993 0.96

13 13 0.0045 0.48 11.4 0.4 1 23 1071 1094 1071 1094 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.014	1.5	9.8	4.7	1	23	108	131	108	131	0.97
2	13	0.011	1.1	10.3	4.6	2	23	261	283	261	283	0.91
3	13	0.00024	0.026	15.4	1.2	2	23	358	380	357	380	0.96
4	13	5.9	6.3e+02	1.6	7.6	3	23	468	489	467	489	0.95
5	13	3.2	3.4e+02	2.5	0.9	1	23	539	562	539	562	0.92
6	13	9.7e-06	0.001	19.8	0.1	3	23	611	632	610	632	0.95
7	13	0.00072	0.077	13.9	1.0	2	23	659	681	658	681	0.90
8	13	0.0078	0.83	10.7	3.6	2	23	726	748	725	748	0.96
9	13	0.1	11	7.1	4.2	3	23	763	784	761	784	0.92
10	13	8.3e-05	0.0089	16.9	0.4	2	23	831	853	831	853	0.96
11	13	0.057	6.1	8.0	0.8	1	23	932	954	932	954	0.98
12	13	0.00011	0.011	16.5	0.3	2	23	971	993	970	993	0.96
13	13	0.0045	0.48	11.4	0.4	1	23	1071	1094	1071	1094	0.98

Sequence Information

Coding Sequence: ATGGCGTCGACGATAGCTCGGGGTCCTTCAATTCCGGAATCCGGTGACGTGGAAAGCGACGGTTCGAGCTGCGAAGAAAGGGACACCTTGAAACGACCTCACGGTGAGGTGGACTTGACGGGTGCtaaaaaacgacgaaaacaatCGACTCCGGTTCGTTTTCCGGCATCTTTGATTACGGAGGAacgcgaagaagaagaagaagaggaagaggaagagtcCGAAGAAGAAGGCGCAGTTTGTACGGATGTCGACAACGAAGGTAAGACAACGGTTGAACGGATCCACCAGACGTCAAAggacgaaaatttgaataacgaATTCCGATGCCAACATTGTAGTCTATTGTTTGATAGCAAACAAATGCTTAATCATCATCTTAATAGCGAACACGATATTTCACGGCAAAGTCTTCAACGATCGCCGGTTCATTCGCAGATTCAAGTTAAACAGGAATTTAATCAAAATCAGGAACAGCCCGAATGTCCTGTCAACCTTTCGGGTATCGGTATTAAAAGTTTCGCAGCAACATGGTTGTCGGGTCATGTTCAATCTCAGTCGCAGCAAATTCAATTGCAATCACAAACGGACGAGTGGCCGCCTTCAGGGTCAGCCGGTTCCTTGTCCTCTATTTCCAACCATCTTCAAGCTCTACCGTTCCCAGGTGCCCTCGCTCAGTATCTTCCTTTGCCGAATTTTTCGCTGACCGCGGATTCGAGCCAGGTACCAAACAGACCACCGATTGGTCCAGCGCCCATGAGGATATTCAACCCTGACGCCTACTGTGACCTTTGTAACAAAGAATTTTGCAATAAGTATTTTTTGAAGACACACAAAGCAAATAAACACGGAATCTACGTTGATACTCCTGGACAAACAGTTGGCGAATCGGGTTTCACGGGGTCAGGATACTCGGGATCATTTTTGGCAACTGGTATGAAACTGGAGcaccaacagcagcaacaaccgCCTCAACAACATCAACCGTCGCAGATGAAATTAGAACCGTCAACAATTCCGGCGGTACCTTCGGGTCAGCCGGTTCTTCAAGCGCCACCTGTTCTAAATTCGGTCTGTGAAATTTGTCAGAAGAGatttaaaaacgaagaatcCGTCAGAAAACACAAACAGAAAGTCCACAATGGCGACGTCAGTGATTCGGGTGATGCGTTGATGCTTCCACCTCAGACAAACGAAGATGACAGGGAAACTTCGCACCACAGTCTGAGCCCTGGAGCTATGGAAGCACTTTTCAAACAAGAATTTGGTGTGGAACAAGAAGACACAACATTCATGCCCGCGCCAAGGCACCTGTCTCCTCAATCGGTTCAGCAAGCGAGAGATTCGGGTTTCAATGCCGACCGTTTGAGGAGATTGGGAGTTATAAATCCTGAAGCATTTTGTGAAATCTGTTGTAAAGAATATTGTAACAAGTACTTTTTACGTACGCATAAGATGAAGAGGCACGGTGTGGTTATCCAGGACAATGAAAAATCGCCGAGTAATCCTGGGGCAGCTGCTGCCTGGCATCACGTGCAGACCAGTCCGCTGAATTTGATAGTAGGTGAAACTAGTGGTAACAGTTCGGAATCAGGTGACCGTTTGGGTGATGATTACGAGTGCAAACCGTGCGGTATTAGATTTCAAACGATGGGATTGCACCAGGCGCATCGTCAGAAGATACACGAAATGGAAGAGGAAACATCGCCGAAACAGGAGACCGATAACGACACCAACGACCAAAGAGGGGATTCGATTAGCGAAGATCTTCAGAAGCTACAAACCATGATTTTACAATTGAACGGTTTGGAATCCGGAAGAGGAGCGCCGTGTCCGATCTGTGGAAAGGATTTCGACTCGAGACAGTCCCTGAGAAGTCACATGACCGTGGAACACGGCGCACTCGTTGACGATACGGTTTCTTCGCCGATTCAGGGGAACGAAAAATCGCCGACTCCGACGAGCGGACCCTTGAATTGCACCTTTTGTGATAAGGAATTTTTCAGTCAAGAAACTCTTAGAAAACATGTCACCGAAGATCATCAACCCTCCACACCAACTTCCGCTCCGTTACCCACGGTGCTTCCAACCCCGGCGACGACTTTGACACCGACAACACCAACCGCTCAAAATCAAGAACGAAGAACATCGGTTTCCATGACACCGACGTCCAGTTACTGCGAAATTTGTAACAAAGAATTATGTAACAAGTACTTCATGAAGACACACATGCAAAGGATGCACGGAATCGAGATAGAAAACGGTGCACAAATCGGCGGTGTTATATGCAATATATGCAACAAGGAATTGTGcagtaaatattttctacgtGTTCACAAACACAACACTCATGGAATCATCGAAGAAGGTTCGACGCCGACGAGTTCGGCAAAGCAGGTCGACAATGACACCAACAATAGCGAAGATCCTGCCCTGAAACCGGAGCAACTCGGTGATTTGAGTCATCGTTACTTCACCCATTTCACGGAAGTTTGTCCCATCTGTAGTAGAAGATTCAGAAGCACGAAATGGCTGAAAGCACATTTGCTCAGCGATCACGGGAAGACCGGAATAGACAAATGGCGAGAATTGGAACAGCAATATCAGTCAGGTCCGCGAAGTGGAAGAACTCCAGGTCCGTCAAGAGTCTCCCATTCCCAGAATCCAAGTTTGAAAATACCAAATGGCATTGAACTGGCTGCTCAGCATTTGAAAACTGGAGATTACGCTGGGCTGGGTAACCAAGTGTTATCATCTCTTTTTGGATCAACCGAAGATCAACAAATGAAAAGTTACCGTTGTTCCTATTGCACTTTTACAACTCCGGTTTTAGCTTTTCTATTCGTTCACGAGCGATCGCATACGAGTCCGCAAAGTTCAGGTTCGGTAATAGAAGCTGAAAGAACACTTCAATGTCCTGTTTGTCTTCAGGGCTTTTCACAGCCCGAATTACTCCAACATCACCTTTTAACTCAGCATCAATTTCCCGGTCTGATTCCACCGTTCCAGCCGCATCTGATGAACAATTCCCGACCGGAATCATCGTCAGAAAAAGACAGTGAATCGAAAGACCGAACTGACCTTGATTCCAGGGATGATTTGATAAAACAATCGAGTCCTCAGACGTCCGGAAGCGCGTCATTGAAcgatgttcaaaaaattcaaagaccAGAAGACGCTACGGCTGTTCAAGTTACACCTCAAGGTGCGTATAAATGTGCCCAATGTGGTTACGCAACCGCAAATTTGAACCGTATCAAAAAACACATTCGAAAGGATCACAGGACAATTTCAACAACGGAACCGTCGGAAACTGTAATCGGCGAATTGACTCGAACGTTGAAAGAAGTTTCGAACAAGCATAAAATACCAGCAAGTTACGCGATGCCTCAGAACATGAATTCGAATCCTGAAAAAACTATAATGCAACCATTTTtgatcgaagaatgcagcgaTATGATTCACGGTGCATCGGAATcgaattcggaaaaaaaatttggtccAGCGCTCGTTTACTTGCCAGTAAAAACGCGAATAAATGCTCCATTGACGGCATCCTTCAATCTAAGTCCtgcctga
Protein Sequence: MASTIARGPSIPESGDVESDGSSCEERDTLKRPHGEVDLTGAKKRRKQSTPVRFPASLITEEREEEEEEEEEESEEEGAVCTDVDNEGKTTVERIHQTSKDENLNNEFRCQHCSLLFDSKQMLNHHLNSEHDISRQSLQRSPVHSQIQVKQEFNQNQEQPECPVNLSGIGIKSFAATWLSGHVQSQSQQIQLQSQTDEWPPSGSAGSLSSISNHLQALPFPGALAQYLPLPNFSLTADSSQVPNRPPIGPAPMRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDTPGQTVGESGFTGSGYSGSFLATGMKLEHQQQQQPPQQHQPSQMKLEPSTIPAVPSGQPVLQAPPVLNSVCEICQKRFKNEESVRKHKQKVHNGDVSDSGDALMLPPQTNEDDRETSHHSLSPGAMEALFKQEFGVEQEDTTFMPAPRHLSPQSVQQARDSGFNADRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGVVIQDNEKSPSNPGAAAAWHHVQTSPLNLIVGETSGNSSESGDRLGDDYECKPCGIRFQTMGLHQAHRQKIHEMEEETSPKQETDNDTNDQRGDSISEDLQKLQTMILQLNGLESGRGAPCPICGKDFDSRQSLRSHMTVEHGALVDDTVSSPIQGNEKSPTPTSGPLNCTFCDKEFFSQETLRKHVTEDHQPSTPTSAPLPTVLPTPATTLTPTTPTAQNQERRTSVSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIIEEGSTPTSSAKQVDNDTNNSEDPALKPEQLGDLSHRYFTHFTEVCPICSRRFRSTKWLKAHLLSDHGKTGIDKWRELEQQYQSGPRSGRTPGPSRVSHSQNPSLKIPNGIELAAQHLKTGDYAGLGNQVLSSLFGSTEDQQMKSYRCSYCTFTTPVLAFLFVHERSHTSPQSSGSVIEAERTLQCPVCLQGFSQPELLQHHLLTQHQFPGLIPPFQPHLMNNSRPESSSEKDSESKDRTDLDSRDDLIKQSSPQTSGSASLNDVQKIQRPEDATAVQVTPQGAYKCAQCGYATANLNRIKKHIRKDHRTISTTEPSETVIGELTRTLKEVSNKHKIPASYAMPQNMNSNPEKTIMQPFLIEECSDMIHGASESNSEKKFGPALVYLPVKTRINAPLTASFNLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00060630;
90% Identity: iTF_00175318;
80% Identity: -