Acen035150.1
Basic Information
- Insect
- Atethmia centrago
- Gene Symbol
- -
- Assembly
- GCA_905333075.2
- Location
- HG995381.1:29089926-29091722[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-10 3.8e-08 34.7 0.0 2 39 13 50 12 55 0.92
Sequence Information
- Coding Sequence
- ATGTCGCTAAACAAAAGGAAGTACTTCGCATGGAATGAAACGAGTATGAACCTTGCCTTAGAATCAGTAAGGAAACAACGAGTGGGCTTAAATGAAGCAAGCAGAATATACGGAGTCCCGAAAGCGACTCTGAAACGGAGGTTAGATGGTGTAAACCAAAAGGCCAAAGAACACGTCCAAATACCAGGTTCCGAAAGTGACCTCCCTCCAGAATTAGAAGATGAGCTGTGTAAACACGTGCTTGAGATGGAAGGTTGCTTGTATGGCATTACTCCTACAGATATTAGACGACTGGCATTTGAGTTAgcggagaaaaataaaataaagcatcgttttaacaaaaataaacaatctgCGGGAAAAAAATGGTACTACGCGTTTATGAAGCGACATCCCAATTTAAGTTTACGACAACCAAGAGCAACATCCATGAGCAGGGCTACAGGATTCAATAAGCCAGctgttgatgatttttttaacaaattagaaGCAGTCTTAGACAAACATGACATAAAAGATGCGCAGCGGATATATAATATGGATGAGACAGGCTTGTCAACTGTGCAGAAAAAGACTAGAAAAGTACTGGCGTTAAAAGGTAAACGCCAAGTTGGAGCCATTACTAGTGGAGAACGTGGTGTAACAACAACAGCCGTATGTTGCGCTAAAGACGAACTGAGGGATGGGGCACCACCTGGCACCATATTTGCTTTCAATCCAGACAGTGGATATATAAACAAAGAGATTTTTAATCTGTGGTTGCAACATTTTGTTGAGACTGTGAAGCCAACACCAGAAAAAAAGGTTTTGCTTCTGATGGATGGCCACGCTAGCCATACTAAAAACCTAGAGGCTATAAATTATGCAAGAAGACATGGCGTAGTTATGTTTTCGTTTCCAGCACACACAACGCACCGGCTGCAACCCCTTGATGTGTCATTCTTCAAACCGTTGAGTCTTTATTACATAGACGAAACTGAAAAATGGCTCCGGCTAAATCCTGGAAGAACTGTGACTGTCTTCCAAGTGTCTATGCTCTTCGGAAAGGCCTATTTTCGAGCTGCTTCCGTAGGCACGGCTGCGAATGGATTTCTGAAAACAGGCATTTACCCTCTCAACAAAGATGTGTTTGCAGACTATGAATTTATAGAAGCAGCCGAACAAGAAAACGCAGAAGATTATTTTGGAACGGTGTTGCATGTCCAAGATCCGATAGACCCATTGTCTGTAAATGCATCATCACAAGAAGAATCTATAGTCCCAATCATAGAAGAACCAATGCCCCATGCAGAGCCGCTACCTACAAAATCGACTGATTACTCACCTAGAGATGCAGAGGTGAGCAACGTAAATGTTGGATCTCCAGCTTCAGCACCAATTCAAATAAGGCGAAGTGACAATGTCCAAACGCCTATAGTGGAGAGTAATTCTACCAACTTTGAATTCCACATTCCACAAATATCTCCTGGAGCCAAGAAGATAGCACAGGAATTACGAAAAAGAAGTCGAAAAGCCCAAAGTAGCATAGAATTGACTTCGTCGCCGTACAAAACTGCCCTAGATGAGACTGCAAAGGTTCCAAAGCAGAAGAAGCCAAAACTGTCCACAAAAGAACCTCAACCATCAACCAGTAAGCAAGCTAACGAGAATATAGAAAAATGGTTTTGCAAAATCTGCTTAAAATGTGAAATAGAAGACATGATTCAATGTATGATCTGTAAAGCCTGGGTACATGTTGATTGTGCTTGTGTTAAGaaacatataaaaaagtatCTGTGCCCTCATTGCACATCATAG
- Protein Sequence
- MSLNKRKYFAWNETSMNLALESVRKQRVGLNEASRIYGVPKATLKRRLDGVNQKAKEHVQIPGSESDLPPELEDELCKHVLEMEGCLYGITPTDIRRLAFELAEKNKIKHRFNKNKQSAGKKWYYAFMKRHPNLSLRQPRATSMSRATGFNKPAVDDFFNKLEAVLDKHDIKDAQRIYNMDETGLSTVQKKTRKVLALKGKRQVGAITSGERGVTTTAVCCAKDELRDGAPPGTIFAFNPDSGYINKEIFNLWLQHFVETVKPTPEKKVLLLMDGHASHTKNLEAINYARRHGVVMFSFPAHTTHRLQPLDVSFFKPLSLYYIDETEKWLRLNPGRTVTVFQVSMLFGKAYFRAASVGTAANGFLKTGIYPLNKDVFADYEFIEAAEQENAEDYFGTVLHVQDPIDPLSVNASSQEESIVPIIEEPMPHAEPLPTKSTDYSPRDAEVSNVNVGSPASAPIQIRRSDNVQTPIVESNSTNFEFHIPQISPGAKKIAQELRKRSRKAQSSIELTSSPYKTALDETAKVPKQKKPKLSTKEPQPSTSKQANENIEKWFCKICLKCEIEDMIQCMICKAWVHVDCACVKKHIKKYLCPHCTS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01076327;
- 90% Identity
- iTF_00172682; iTF_01527009; iTF_01527010; iTF_01440935; iTF_01440936; iTF_00172681; iTF_01440937; iTF_01440938; iTF_00172683; iTF_00172684; iTF_00172685; iTF_00172686; iTF_00172687; iTF_00172688; iTF_00172689; iTF_00037719; iTF_01440934;
- 80% Identity
- -