Asph005535.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453004.1:10221145-10231492[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 5.6 6.6e+02 2.4 1.5 1 23 54 77 54 77 0.94 2 20 0.032 3.7 9.4 4.1 1 23 84 107 84 107 0.97 3 20 5.8 6.8e+02 2.3 4.0 1 23 188 210 188 210 0.96 4 20 0.002 0.23 13.2 1.0 2 23 216 237 215 237 0.97 5 20 2.4 2.8e+02 3.5 1.4 1 23 243 265 243 266 0.94 6 20 0.24 28 6.7 3.4 2 22 511 531 510 531 0.95 7 20 0.1 12 7.9 2.6 1 23 628 650 628 650 0.95 8 20 2.2 2.6e+02 3.6 0.3 2 23 787 808 786 808 0.95 9 20 0.0029 0.35 12.7 0.6 2 23 887 908 886 908 0.96 10 20 0.39 46 6.0 1.2 1 23 916 938 916 938 0.97 11 20 5.8 6.8e+02 2.3 2.6 1 23 974 996 974 996 0.93 12 20 0.00028 0.033 15.9 4.0 1 23 1004 1026 1004 1026 0.99 13 20 0.26 30 6.6 1.8 1 23 1111 1133 1111 1133 0.98 14 20 1.8 2.2e+02 3.9 0.4 1 23 1189 1211 1189 1211 0.94 15 20 0.009 1.1 11.2 1.0 1 23 1306 1328 1306 1328 0.95 16 20 0.035 4.1 9.3 0.9 1 23 1334 1356 1334 1356 0.92 17 20 0.0078 0.92 11.4 2.6 1 23 1446 1468 1446 1468 0.97 18 20 0.0002 0.023 16.4 1.4 1 23 1474 1496 1474 1496 0.99 19 20 0.38 45 6.0 2.9 1 23 1588 1610 1588 1610 0.96 20 20 0.011 1.3 10.8 5.6 1 23 1621 1643 1621 1643 0.98
Sequence Information
- Coding Sequence
- ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGTCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTACGGCGACGTGTCTTCGGAGGCTTCCTCGGACGCCGCGGAAGATTATGAACTACCACAATGCAAGATAAGAAGGAACTATAATTGCACCAAGTGCACGTTCTATACGCAGAACCCTCGAGCTTATCTCGTACACACGCGTGACACTCACTTTGTAAAACTTAAGATTTACGATTGTCCACACTGTGTTTACGCTTCGAGGCATCATCAGAAACTTATAAGACATATCAAAATGGTCCACGGAGAATCGAAGCCGACATCAGCTGGTAAACAAGACGTGGAGTTATCACCTCCCTCCTGCGATAACATGGAGCAAGCAGAGCGTATTGAAGACTTACTGGAAGAGGTAGAAGACTGCGAGGATATGATGATGGAAGTAGACGAGGACTCCTTGGAGCGTCCTGATGATATCGATGTTGAGTGCGATAGAAGTGTAGACCAAGTAGCGCCTTCTGATGTATCAAAAACTAAGGGCAAATTCTTCTCATGCGATAAGTGCAACTATGTCACCCACATAAGAGCTAGATTCACAAAGCACGTTAAGTATCATTCGATGCCTATGATCAAGTGTACAATGTGTGATTTTCGAACACCCTACAAATGGAATTTAGACCGGCACATGAAAAACCACGGTGGAACTGGAAGTTTCAATTGTTCGATGTGCAACTTTACGGCGGATATCAAGCAGAGTTTGACGGTGCACGAAATGAATCATCATACACCGCCAGCGGGACAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCGGAGTTCGACGCAGCGAGCGCGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGGACATGGGTCTACAATACGCAGAGAGAGAAATAGTTAGTTGCAAGAGTGATTCCAATGAAGCTACAGCTTCTGACGCAAATGCCAGAAAAGACGCTTCACACCTGGCACAAGATGTATATAACCAGCTTTCGCCTAATCACAGTGCCGATGATaagttacaaaaacaaaacaggaAAATTCCTAGACCAATACCACAACTCATACCGTTGAATTCTTCAACCCCCAACCAAAAACAAACATGCTCTGGTGAACCTCCACACAAGAAATTCAAGGAATCTTTATCAGCCGAAATAGATGATTCCAATTCAGGAAGTAAAATTGAAGATTTTTCAAGTGATATAACTCTATTTCCTGTGAATCCATCAGTAAAAGAGGCTGCAAGCCGTAAGAAAAATGAATCATTTTTCGACAGATTAAAAGAGAGATTATTAACTGAAACGGGTGAAGAAGGATCCCTTAGATGCAAAAATTGTGGATTTGAAAGTAAATGTTTATCTGAACATTCTGTGCATGAGAAAAATTGCTCTCCTCAAAATAATCGGATCAATGCAAACACGTCGCTTAAAAGTTTAAGTTCAACTCGATGCCAAAATTGCAGACACAGGTGTAAATCTAGTGCAGACTTATACATTCACATGCAAACTTGCGGGAGGAGTGAAAAGATCGAAGACGAAAATACTATGCAGAACCAAGAGAGTAATGATGGAATCCTACCAATCCATGAAAAAGAGTCTGAACCCCATCCAATGGAAAACGTCGTTTTCGTTTGGAACAATATTAACCATGATCCTAACAAGTTTGATATGCCTctagatataaatataaatgatgATAGCACTCTACcagaaatacatagaaattTCGATGCAGAAATTGTTGATGAAAGTGAAACTATGAATTTGTCGCCAAGTCAAGCTATCGGAAGAAAGGTATTTAAATGTCCGCATTGTCCATTTTTCTCCACAACAGCATCCAGATTTCACGTCCACATTGTGGGTCACTTAAACAAGAAACCGTTTGAGTGTTCCCTTTGCAAATATAAATCTAACTGGAGATGGGATATTACCAAACATATTAAATTGAAATCTGCGAGAGATCCGGAGCATAACGATGCTAAAGTATTAATGACTGATGAAACAGGAAGAAGAAACTATAGCAAATATAACAAATTCTTAGCAATGCCAATTTTAAACGAAAATGGTGAAAATGAGTTTCATTATCTAGAACCGAATACTTCTGTCGATGGCACGATGGAAATGGATGAATCATACAACGATATATCCGATGTTATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAAACTCAACAAAGTGAAGATAAGTACGACTTTATTGATAACAGAGGTCTAAATGATATGAAGAAACCCAAGAGAACACTGTGGAAATGTAAAAGATGTAATTACAAAGATCCTTCAAAAGAAGCTCTATTAGAGCACGTTCGTGAACACTCCAGATCGGATGGCATTCAAGACGAATCGAACAAACAGCCTAAGAAACCTGAAAATAATACTCCCGATCCAGCCGACCTAGCGTATCGTTGTGGTCATTGTAATCAACTGTCTAATTGGAAACATGTCATCCAGCGTCATTGCCGGTTAAAACACGATGGAATCATAAAAGTCATAACTACAGTAAAACCAAAACCTGACCCCCCAATGAATATCCATGAGATCAACATCGACACTTGCAACAAATGTCCGTATAGAACAAATGACAAAAAATTACTTATTGCACATTTACAGCAACACCAGCCCTCGCCGAGTTCAATATTCAAATGCTACTTCTGCCCATTCTTCGTAAAGGATGAACCAGAATTAATCCAACACCTTCACCTTCACGGTATCACCGACCCCGAAGATTACATTGCAAAAGCTATGGGGACCAAATCCCCAGGGCCAGAGCAGCACGCGCCTGCAACTCCATTACTGAACTCCACCAAACGTCACAAATGCATAGAGTGCCCATACGAAACGAACAGCAAGTCACAATTCATGTATCATGAACAATTTCATCGACTTCCGGCAGACACACCTTATAAATGTCCAGAGTGCAATTACAGCGTATCTAAGAGACACCTGCTGCACCAACACCTTCGCGTTCATGGAATCGCAACAAAAAGAACTGAAACGGAGGCCGAATTAGAGGCATCAACATCAGCACAAAACAAGACAGAGCTGAAAATTGAATTTCACATTAATCTAGATGAAATACCGTATGTTTGGGTCTCGGCGAAAAACGAGTTTCATAAGATGTACAAGTGCCGATACTGTTCATATGTTAATTCTCAAAAATGTAAAATTCCAAATCATGAAAAAATTCACTGCATCGTATTCGAAAACAATGATACTACAATTTACAAATGTTTGGAATGCAAATTTACATGTGATAACGCCGGTAGACTAGCAGAGCATTCCAAATCGCATGGCGAAATATATGGTCGCATTTATTGTCCCGTTGAAGATGATGTCCCCGATGATGAACAGATTACCAAATTGAGAAAAGTCATAGAAATTGAGAAGTCAAGCAATCCAGAAAGTTTTTCTAGAGACGAAGGCTCAACAAACGAAAATAGagagataaaattattatatttttgtcaaAAGTGTCCAGCAAGATTTCTTGAAGACAGCGAATTACAAGCGCATGAAAAGTTTCATGGTGTAACGTTTccaaataaatgtaaaagttgtgaGTTTTCAGTTCCCGAGGATAATGAATTAGCGTCACATGCTacagttcatactgatgaataccaCACAAAATCGAAGATGCTCAAATTTATTCACAACTTCCATCCTTCGCACAGAGAACCCATTCTAGAACTTCTACACTGTCCAACGACTTCAGAGATCACGTGGATAGCTACTGGTCCAAGCAAAGTTGAATATATAGAAAGTCCAATGAAAAAgataaatgatacaaaaagcgtgccaaaacaatattattgtaaACAATGCCCTGCAAAGTTTTTCAAAAGTTCGGCGCTCACTTATCACTTGGGATTACATGGAGGTGAAGGGGAGCATAAGTGCAAGAAATGCACTTACGCCGTCAAGAATATTGGGAATTTAGCCAAACACGAGGTATTGCATGAAAATGAGAACAAGACTACAAATTGTGATTATGAATCTGGGGATGATATGGACTATAAAAATATCCCATTGTCAGGTACAGATTTGTTCCAGAGAAAGACTGAAGCCCAGAAAAGAGTCTTGACCGATAAAGATAAGTTGGTTAAGCCGAATGATCATTTTCCACCTGTTTTACAAGCCGATCCACAATTCGGTTACTTGATGCATGGTAATCCCGAATTTATATATCCCACGTACCTCAAAAATGGACGGCAAAAAGAAAAGCGATATAAATGCCACAAGTGCCCTTCAGCATTTGAAAAAAGGGAACAATATAAAATTCATCTATCATTACATGGTTCGAAACAAAGGTATAAATGTGAATTATGTGATTACTCAGTCAAATATTACGCAAATTACGTTCAACATATGAGGAAGCATCAAATGAATGATGAAGCTCAagcagaaagaaagaaaggtaGTAATGATTTTGTAGAATCCGAAAATCAAGAACTTGTTAAATTAGACGACAGTAGTGACAATATTAAACTTGCAATAAAAACAATGCCAAAAGGGGCTCCAAGGAGTGACTTCCAACAATTCTCAATAAGTGACCAGCAAACTCTTAGACTACTGCAACGAAGACGCTCAATGAATAATACCGGCAAAGACTTAAATACATCTGAAACTTTGCCAATGAAAGAGCGTAAAATGCACATGTGCTTATTATGTCCCTACACAAATCAACGTCAAGATTCCTTAACTAATCATTACAGAAGGCATGGTGACACCGATGTCCTAAATGCAGGAAGCCATAAATGTTCTCATTGTGACCTAGTAGTTGTGCAGTCACATTTCCTCCGTGAACATCTGAAGACTCACTTCAACTACCACAAAACTCTTACCCCTGAATGTTTTGTGGCTAATGAAGATGTCAATTTTTCCATAACCAAGTTGGATGAAGACAGTGAGTTAGTTGATCTCAAATTAGATGTGCTACACAAGAGTTTTGCATGTAATGATGAAAAGATATTTGTGAAAATTAAAACAGGAGAACTATGGGTGGAATAA
- Protein Sequence
- MLQQMSSPPSAQVGEVATIVRHLEGRVYGDVSSEASSDAAEDYELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDTHFVKLKIYDCPHCVYASRHHQKLIRHIKMVHGESKPTSAGKQDVELSPPSCDNMEQAERIEDLLEEVEDCEDMMMEVDEDSLERPDDIDVECDRSVDQVAPSDVSKTKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSSRRRNRVGASDTVIAEFDAASALLPKEEEGSGDSRSSHSVSDMGLQYAEREIVSCKSDSNEATASDANARKDASHLAQDVYNQLSPNHSADDKLQKQNRKIPRPIPQLIPLNSSTPNQKQTCSGEPPHKKFKESLSAEIDDSNSGSKIEDFSSDITLFPVNPSVKEAASRKKNESFFDRLKERLLTETGEEGSLRCKNCGFESKCLSEHSVHEKNCSPQNNRINANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCGRSEKIEDENTMQNQESNDGILPIHEKESEPHPMENVVFVWNNINHDPNKFDMPLDININDDSTLPEIHRNFDAEIVDESETMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYLEPNTSVDGTMEMDESYNDISDVMNVQFEMQPLNLQTQQSEDKYDFIDNRGLNDMKKPKRTLWKCKRCNYKDPSKEALLEHVREHSRSDGIQDESNKQPKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPPMNIHEINIDTCNKCPYRTNDKKLLIAHLQQHQPSPSSIFKCYFCPFFVKDEPELIQHLHLHGITDPEDYIAKAMGTKSPGPEQHAPATPLLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIATKRTETEAELEASTSAQNKTELKIEFHINLDEIPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENNDTTIYKCLECKFTCDNAGRLAEHSKSHGEIYGRIYCPVEDDVPDDEQITKLRKVIEIEKSSNPESFSRDEGSTNENREIKLLYFCQKCPARFLEDSELQAHEKFHGVTFPNKCKSCEFSVPEDNELASHATVHTDEYHTKSKMLKFIHNFHPSHREPILELLHCPTTSEITWIATGPSKVEYIESPMKKINDTKSVPKQYYCKQCPAKFFKSSALTYHLGLHGGEGEHKCKKCTYAVKNIGNLAKHEVLHENENKTTNCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSNDFVESENQELVKLDDSSDNIKLAIKTMPKGAPRSDFQQFSISDQQTLRLLQRRRSMNNTGKDLNTSETLPMKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDVLNAGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANEDVNFSITKLDEDSELVDLKLDVLHKSFACNDEKIFVKIKTGELWVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01231174;
- 90% Identity
- -
- 80% Identity
- -