Asph038445.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Asteroscopus sphinx
Gene Symbol
-
Assembly
GCA_949699075.1
Location
OX453030.1:10641485-10645182[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0043 0.5 12.2 2.0 3 23 55 76 54 76 0.98
2 11 7.9 9.3e+02 1.9 0.0 2 23 101 123 100 123 0.82
3 11 0.0004 0.047 15.4 0.5 2 23 147 168 146 168 0.96
4 11 0.00037 0.044 15.5 1.3 1 21 172 192 172 193 0.96
5 11 0.21 25 6.8 0.1 1 23 234 257 234 257 0.96
6 11 0.27 32 6.5 0.2 2 23 283 305 282 305 0.95
7 11 0.014 1.6 10.6 0.9 2 23 329 350 328 350 0.95
8 11 0.00015 0.018 16.7 0.0 1 23 354 377 354 377 0.97
9 11 0.44 51 5.9 0.6 1 23 381 404 381 404 0.96
10 11 8.6e-05 0.01 17.5 2.0 1 23 443 466 443 466 0.97
11 11 0.00025 0.03 16.0 0.4 1 23 476 499 476 499 0.96

Sequence Information

Coding Sequence
atgtttgcagggaCCACATTGGAAATTCACGGACGTAGTGACACTgagaaacaaaaaaagaaaattgtcCTTGTATACCAGACGCCGCAAAGGCGAAACGCTGAACTAATATTAACTTATTCAACCGCTTACCCTTTTAAAACTAGATTCAGTCAAATACTCTGCTCATACTGCCACGATGAGTTCAACAGCCTAACAGATCTCAGATACCACATGAAAACTGAACATGTCAGTTCAGATTTCAAAAACGTCTTCTACAGAGCTAAAGACAATTTAATCAAAATAGATATCActaatttaaaatgtaaaatatgcGCCCAAGAAATCCAAGATGTCGACGGTCTTATGAGCCATTTGTATGGGGAACACAATAAACCTGTTAAATTTAATGTTCGGTATGGTGTCTTGCCTTATAAACAAAATTCTGAGAACCATTGGGTTTGTGTTTACTGTAACAAAACCTTCACTGCTTTCATATCTTTCAAACGGCACATAGTAACGCACTTCATGAATTATAGTTGTGACAAGTGTGGTACGACTTTTGTATCAGATCACGCGTTGCGAGATCATCATCGGCAAGTAAAATGCTTCAGGACGGCTTATAAACCTCGCAATGGGAGAGTCTTAAAACCTAGAACGAACGCAGAGATTATCCTACAATGTTCAACGGCATGCCCCTTTCGAACATGGAAAAGTAACTTCAATTGCGTCTTCTGTAGGGTTCAAAGTAACGATCCAAGCGGGCTTCGAATGCATGTCATCACAATTCACGCAAATTATGACGTCAAAGCCGCCTTCTACAAGAAACTAGGAAAAGATTTCCTCAATGTAGATATAACTGATCTCCAATGTAAACTCTGCTTCATGCCTGTTGACTCTTTTGACAGTTTGATTTACCATCTAAAGAACGATCATCAGCAACCGATAAATACTGACGCACAGTTAGGCGTCCTACCTTTTAGATTAAATGATGGATCCATATGGAAATGTACGATATGTCTAAATGAATTCAAAGACTTCGTCTCTCTAAAGAAACATACTTCAGAACACTTCCAAAACTACGTTTGTGATACTTGCGGCGAAGGTTTTATAACAGAATCTGCAATGATAGCTCACACTAAGATACCTCACGAGAACAAATACAACTGCAGCCGATGTATCGCTACATTTTCGTCGCTAGACGAGAGGAATTTACACGTAAAAACACAGCACACCTCCATGCCATACATGTGTGTTTACTGCAAAGAAAAACCACGGTTCGCAAACTGGGAAGTTCGCAAAAAGCATTTGATGGCAGTCCATAATTATAAGACTGGAGCAGACAAATACGAATGCACGACATGCCAGAAGTCTTTTAAAACGAGATCTGGGAAGTACAACCATATGGCGAGGGTGCATAGAATTAAAAAAGATTCGGAATTGAATTACCCTTGTCCAAGCTGCCCAAAAGCGTTTACGACTAAATTATTCTTGGACAAGCATCTCGCAAAAAAGCACTTTGATGTGTGA
Protein Sequence
MFAGTTLEIHGRSDTEKQKKKIVLVYQTPQRRNAELILTYSTAYPFKTRFSQILCSYCHDEFNSLTDLRYHMKTEHVSSDFKNVFYRAKDNLIKIDITNLKCKICAQEIQDVDGLMSHLYGEHNKPVKFNVRYGVLPYKQNSENHWVCVYCNKTFTAFISFKRHIVTHFMNYSCDKCGTTFVSDHALRDHHRQVKCFRTAYKPRNGRVLKPRTNAEIILQCSTACPFRTWKSNFNCVFCRVQSNDPSGLRMHVITIHANYDVKAAFYKKLGKDFLNVDITDLQCKLCFMPVDSFDSLIYHLKNDHQQPINTDAQLGVLPFRLNDGSIWKCTICLNEFKDFVSLKKHTSEHFQNYVCDTCGEGFITESAMIAHTKIPHENKYNCSRCIATFSSLDERNLHVKTQHTSMPYMCVYCKEKPRFANWEVRKKHLMAVHNYKTGADKYECTTCQKSFKTRSGKYNHMARVHRIKKDSELNYPCPSCPKAFTTKLFLDKHLAKKHFDV