Asph038318.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453030.1:8764237-8768464[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.56 66 5.5 1.4 1 23 43 65 43 65 0.97 2 28 2.1 2.4e+02 3.7 0.2 3 23 94 115 94 115 0.93 3 28 0.00054 0.064 15.0 1.1 2 23 136 158 135 158 0.96 4 28 8.8e-06 0.001 20.6 0.4 1 23 163 186 163 186 0.97 5 28 0.00025 0.03 16.1 3.7 1 23 190 212 190 212 0.98 6 28 0.031 3.7 9.5 1.6 2 23 215 237 214 237 0.96 7 28 0.14 16 7.4 0.7 1 20 242 261 242 263 0.90 8 28 0.01 1.2 11.0 3.2 1 23 310 333 310 333 0.94 9 28 0.053 6.2 8.7 0.3 1 23 406 429 406 429 0.95 10 28 2e-05 0.0023 19.5 1.4 1 23 434 457 434 457 0.95 11 28 4.5e-05 0.0053 18.4 0.2 1 23 463 486 463 486 0.97 12 28 7.1e-05 0.0083 17.8 0.4 2 23 492 514 491 514 0.97 13 28 0.0065 0.77 11.6 1.8 1 22 518 539 518 539 0.95 14 28 0.00092 0.11 14.3 2.5 1 23 576 598 576 598 0.97 15 28 7.2 8.5e+02 2.0 0.0 3 23 627 648 627 648 0.90 16 28 0.0029 0.34 12.7 0.8 1 23 668 691 668 691 0.96 17 28 2.7e-05 0.0032 19.1 0.3 1 23 696 719 696 719 0.96 18 28 0.0027 0.32 12.8 4.5 1 23 724 747 724 747 0.96 19 28 8.5e-05 0.01 17.5 0.3 2 23 750 772 750 772 0.96 20 28 0.012 1.4 10.8 1.3 2 21 780 799 779 800 0.94 21 28 0.00096 0.11 14.2 1.4 1 23 854 877 854 877 0.97 22 28 1.5 1.8e+02 4.1 0.0 2 23 950 973 949 973 0.93 23 28 2e-05 0.0024 19.5 0.2 3 23 980 1001 979 1001 0.94 24 28 0.0037 0.43 12.4 2.9 2 23 1006 1028 1005 1028 0.94 25 28 0.011 1.2 10.9 5.1 1 23 1033 1056 1033 1056 0.96 26 28 1.6e-05 0.0019 19.8 5.0 1 23 1060 1083 1060 1083 0.97 27 28 0.00027 0.032 16.0 0.3 2 23 1090 1111 1089 1111 0.96 28 28 6e-06 0.00071 21.1 1.1 1 23 1117 1139 1117 1139 0.98
Sequence Information
- Coding Sequence
- ATGTTAACATTTTATTACCATACGGAAACAGAGCCAACAAAGCACAGTGCAAGTTCCCTCAGGAGAAGGAACCTACAAATACTATTCAACAATACAACGTTAATACCTTTTAAATGGCGCGGTAAATACATGTGCTTCTATTGTGGAGACGATTTGGACACGTACGAACGTCTCCGGAAACACACGAAAAGCCACGGGGCTTGTACTTACGAAGACAGGGCTATACAACTTGTAAAGGCAGCAGATATCGAAATTAAAATTGATGTTTCCGAAATCGGTTGCGATCTTTGCTCGGAATCTTTTCAGTATGTCGATGATATTATTAACCATTTGATGTTTAAACATGATTTGCCTTATGATAAAGACGTAGAGCTTATGATAACGGCGTATAGGTTAATCGATCTACAGTGTTTACATTGCGATCAAAGTTTCGACTATCTTCGTAAACTGATCAGTCACATGAATATCGATCATCCTATTAATTGCTTTCCGTGTTCTGGGTGTCcgcaaaaatttaataaaaagagaGACCTAGAATCTCATATGAGAATCCTTCATAAGCGAAACTATTCTTGCACCAAATGTCACCAATACTTCCCTTCGAATTCGGATCTTGTGCGTCATAAGTCTACTCATCCTTCTACTTGTAACATCTGTTTCCAAACTTTTGCATCCGATAGCAAAAGGTTGACACACATGAAAAAGGAACACGACTATGATAACTTCTTATGCGGTTTCTGCCAAAAGTCGTTGACTACAAAACAGGCCTTTTTGAGACACGCTTCAAAATGCACTTCCAACCCAAATCAAGATACCATCTTAGTTGATGACGAAGATAAAAAACAATCCGTGAAAGAAATCCGAAACAGCTTAGCTTGTATTTTTAACATGTCAACCGCACTACCATTTAAATTCTTCATGAACAGATTCCGTTGCTTCTATTGCTCAAAAGATTTCACCGTTTGCGAAGATTTGAAAGAACACACAGTAATGCAACACCCTCACTGTGATATATCTTTTAAATCGATGCGATTAAGGAATCGATATGATGGCGTCAAAATCAAAATTGATACTTCGGCACTGTCCTGTAAACTATGCTTCCTATCCTTGCAAGATATAGACGATTGTATCGATCATTTGAGCAAGGAACACAAAGCTAAATGCGATATGTCGGTTGAGAGTAACCTGCAGTCCTTCAAGCTGATCAAAGATCAATACCCTTGCCCCATTTGCGGCGAAGTTCACAGATATTTCGGGTTGCTTCTCAAGCATGTTAGTTCAAAACACTCTGACAATAAACACATCTGCATGTACTGTGGCAAATCGTTCCGAACCGACCCCAATCTCAGAGCGCACATTTCTAGACGCCATAAAAGTGACGGTAATTACAAATGCAGTAACTGCGACTTAGTTTTTCCCACTAACAACGCGTTGAAGACTCATCTAGGCACAGTTCACGGTACCAAAATCATTCAATGTTCGGAGTGCTCGGAAAAATTCATTTCTCAATACTGGATGCAAAGACATATGATCACGTCTCATTCTCATGGACATAAATGTTCTTACTGCGACAAATTGTTTATCAAGAACTCTTTTATGATAAATCATGTACGGAGATATGATCTGCCAGGGCCGTACGAAGGCTGTACCTCTGAGCGGAGGCGGAAAAACTTGAAAATACTATTCAACCACACCAGCATAATACCTTTTAAATGGCGCGGAAAATACGTATGCTTCTACTGCGGCAAAAACTATACAGAATATACCGAATTCAGAAAGCATACAAAAGCACACGGTCTATGCACCACCAAAGATTACTccctaaaattaataaaagggAATAACGTCGAAATTAAAATTGACGTCTCCGAAATCGGTTGCGATATTTGCAATGAACCTTTAAACAGATTCGAGGAAATTATCGATCATTTGATAGGTAAACACAATATGgaatataacaaaaatattgatataCCCTTCCAAGAGTACCGATTAGTCGATTTTCGATGCTTGTATTGCGAAGAACAGTTTTCTTACTTCggctatttaataaaacatgtgAATAACGTCCATCCGCGAAATTGTTTCATTTGTGACGACTGTGGAGTCACGTTCAACAAGAAAAGGGACTTGGCTGTACATTTGAGAAATTATCACAGGCAGGGCGGGTATCCCTGCGATTTGTGTTTGAAGAATTTCGAAACCCACCATACTTTGCGAAGACATCAAAATAATATGCATTTTAGACAATGCAAGAATTGTGGTGTGCGTTTCGCGTCTCTATCTTTATTACAAAAACATGTGCAAGTAGACCATCCACAAATTGAGGATAATATGAAGTGTAGTTACTGCTCCAAAGAGTTCCACACTTCTTTAGGCTTGCGACAACATATAAGTAAGTGTAGAGTCAAAATTATGTCGCAGATCGAACCCCACACTTCATTTCTAGACGACAAAAATATAGAACctaagaaaaaacaaaatattctgCAAATACGGCTGAATATACAGTGTGTTCTAAACATGTCAACTGCAGTTCCCTTCAAATTCTTCTCTAAATACTCCTGTTTTTATTGCTCAAAGAAATTTGTAGAATTTGACGAGTTGCGACAGCATACTAATATCGAGCATACTGTATGCGATCTGAAGTCTAAATGCATGAAGAAATGTAAAGGAGAAAGGATAGCTGTTAAAATTGATATATCCGCTTTAGCTTGTAAATTATGTTGCCTTCCCATGTCTGAATTAGAAGAATTAATAAACCATTTGATAATTCAACATAAAGCGAATTATGATACGTCAATTACAGGCTGCCTTGAGCCTTTCAGAGTTATTAAAGACAATATGCCATGCCCGATATGCCCGGACACTGCTTTCCGTTATTTCGGAATTTTACTAAGACATATGAATTCGGAACACAGTAATAATAACAGAATCTGCGATTTCTGTGGTCGAAGTTTCCGAAACGCAGCCAACCTTAACGTCCACATAACATATTCCCACACAGGATCTTGCGAATGCGATATTTGCGGCGTCAAGTACAAAAACCAATGGTGCTTAGCGCGACATAGAGCGAAAACTCACAACGCAAAAGACCACAAATGCCCGAAATGTCCCGAACAATTCCAGTCACAGTACCACAAACAAAAACACTTAATCAAGATGCATAATATAGGTCACAAATGTAATTACTGCGGCAAAATGTTCACAAGAAACTCCTTTATGAAGGATCATGTGAGGAGAACTCATTTGAAGGAGAAAAATATTCCCTGTTCCATTTGCAATGAGAAGTTTTTTGACAATTATCTTTTAAGGATGCATATGGTGAAACATGAGGGTGATAGGAAATTCAGTTGTACTGTTTGTGGGAAAACCTTTCTGAGAAGGAGTAATTTGAGTTCTCATATGGAGATGCATAAAAAGTATGGGCATGTGCAGTTGTAG
- Protein Sequence
- MLTFYYHTETEPTKHSASSLRRRNLQILFNNTTLIPFKWRGKYMCFYCGDDLDTYERLRKHTKSHGACTYEDRAIQLVKAADIEIKIDVSEIGCDLCSESFQYVDDIINHLMFKHDLPYDKDVELMITAYRLIDLQCLHCDQSFDYLRKLISHMNIDHPINCFPCSGCPQKFNKKRDLESHMRILHKRNYSCTKCHQYFPSNSDLVRHKSTHPSTCNICFQTFASDSKRLTHMKKEHDYDNFLCGFCQKSLTTKQAFLRHASKCTSNPNQDTILVDDEDKKQSVKEIRNSLACIFNMSTALPFKFFMNRFRCFYCSKDFTVCEDLKEHTVMQHPHCDISFKSMRLRNRYDGVKIKIDTSALSCKLCFLSLQDIDDCIDHLSKEHKAKCDMSVESNLQSFKLIKDQYPCPICGEVHRYFGLLLKHVSSKHSDNKHICMYCGKSFRTDPNLRAHISRRHKSDGNYKCSNCDLVFPTNNALKTHLGTVHGTKIIQCSECSEKFISQYWMQRHMITSHSHGHKCSYCDKLFIKNSFMINHVRRYDLPGPYEGCTSERRRKNLKILFNHTSIIPFKWRGKYVCFYCGKNYTEYTEFRKHTKAHGLCTTKDYSLKLIKGNNVEIKIDVSEIGCDICNEPLNRFEEIIDHLIGKHNMEYNKNIDIPFQEYRLVDFRCLYCEEQFSYFGYLIKHVNNVHPRNCFICDDCGVTFNKKRDLAVHLRNYHRQGGYPCDLCLKNFETHHTLRRHQNNMHFRQCKNCGVRFASLSLLQKHVQVDHPQIEDNMKCSYCSKEFHTSLGLRQHISKCRVKIMSQIEPHTSFLDDKNIEPKKKQNILQIRLNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRQHTNIEHTVCDLKSKCMKKCKGERIAVKIDISALACKLCCLPMSELEELINHLIIQHKANYDTSITGCLEPFRVIKDNMPCPICPDTAFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYSHTGSCECDICGVKYKNQWCLARHRAKTHNAKDHKCPKCPEQFQSQYHKQKHLIKMHNIGHKCNYCGKMFTRNSFMKDHVRRTHLKEKNIPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCGKTFLRRSNLSSHMEMHKKYGHVQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447460;
- 90% Identity
- -
- 80% Identity
- -