Basic Information

Gene Symbol
Bgb
Assembly
GCA_035079395.1
Location
JAVHKZ010000012.1:2300058-2302690[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-81 7e-77 257.2 3.1 1 163 35 213 35 217 0.90

Sequence Information

Coding Sequence
ATGCATTCCGTGAGTGATACTGGTTCTTTGGCTGGCGGAGTGGGAATGTTGGGTGCTTTTGATAATCTATACGAGCAGCCGAAACCTCGATTTATATTCAAAATGCCTCGAGTGGTACCGGATCAAAAGCATAAATTCGAAACTGATGAACTTTTTCGACGTTTGAGCCGTGAAAGCGAAGTCAGATATACTGGTTATCGAGATCGTCCTTCGGAAGAGAGGCAAGTTAGATTTCAGAATGGTTGTCGTGAAGGACACTCTGAAATAGCTTTTGTGGCGACTGGAACTAATATTCAGCTAGTCTTTGGTAATTCCTCGAATGGCTATCATCACCATCACCATCATCACCACCACCAGTCCCAGCATTTGCCCAATAATTCCGGCAACGTCAGTGGACGCGAAACAGATTTCGACAAAGAACACGGCAAGGTACATTTGCGTTCTCATTTCATAATGAATGGGGTATGTGTCTGTTGGCGCGGATGGATCGATCTTGAGAGGTTAGACGGAGTTGGCTGCCTGGAATTCGATGAAGAGCGAGCAGCGATTGAAGATTCTGTGTTACGTGATCAAATTGAGAGGTATAATCAACGACTACGTGAATTCGAGGAAAGACATAGAAGTTTCCGAAACACCGCCGTACCCACACATCCTGAGCGAGGAGTAGCTGGTGGTAATGCCAACACAAACAGTGGAACTGGTGGTGGCGGTAGTCACGGACGGTCTTTAGAGGTACTAAATTTTGATTGA
Protein Sequence
MHSVSDTGSLAGGVGMLGAFDNLYEQPKPRFIFKMPRVVPDQKHKFETDELFRRLSRESEVRYTGYRDRPSEERQVRFQNGCREGHSEIAFVATGTNIQLVFGNSSNGYHHHHHHHHHQSQHLPNNSGNVSGRETDFDKEHGKVHLRSHFIMNGVCVCWRGWIDLERLDGVGCLEFDEERAAIEDSVLRDQIERYNQRLREFEERHRSFRNTAVPTHPERGVAGGNANTNSGTGGGGSHGRSLEVLNFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-