Basic Information

Insect: Aspidapion aeneum
Gene Symbol: -
Assembly: GCA_963576565.1
Location: OY755045.1:75993388-76005984[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0015 0.18 14.3 2.7 1 23 94 116 94 116 0.98

2 12 0.0014 0.17 14.4 4.4 2 23 126 147 125 147 0.97

3 12 0.015 1.9 11.1 5.0 1 23 156 178 156 178 0.98

4 12 0.003 0.36 13.4 3.9 1 23 187 210 187 210 0.94

5 12 0.0021 0.26 13.8 5.4 1 23 235 257 235 257 0.98

6 12 0.0054 0.66 12.6 5.9 1 23 266 288 266 288 0.98

7 12 0.089 11 8.8 1.1 3 23 299 320 298 320 0.94

8 12 0.0013 0.16 14.6 5.6 1 23 345 367 345 367 0.98

9 12 0.0054 0.66 12.6 5.9 1 23 376 398 376 398 0.98

10 12 0.00066 0.081 15.4 3.1 3 23 409 429 408 429 0.98

11 12 0.00028 0.035 16.6 2.3 2 23 439 460 438 460 0.97

12 12 0.0044 0.54 12.9 2.5 3 23 471 492 470 492 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0015	0.18	14.3	2.7	1	23	94	116	94	116	0.98
2	12	0.0014	0.17	14.4	4.4	2	23	126	147	125	147	0.97
3	12	0.015	1.9	11.1	5.0	1	23	156	178	156	178	0.98
4	12	0.003	0.36	13.4	3.9	1	23	187	210	187	210	0.94
5	12	0.0021	0.26	13.8	5.4	1	23	235	257	235	257	0.98
6	12	0.0054	0.66	12.6	5.9	1	23	266	288	266	288	0.98
7	12	0.089	11	8.8	1.1	3	23	299	320	298	320	0.94
8	12	0.0013	0.16	14.6	5.6	1	23	345	367	345	367	0.98
9	12	0.0054	0.66	12.6	5.9	1	23	376	398	376	398	0.98
10	12	0.00066	0.081	15.4	3.1	3	23	409	429	408	429	0.98
11	12	0.00028	0.035	16.6	2.3	2	23	439	460	438	460	0.97
12	12	0.0044	0.54	12.9	2.5	3	23	471	492	470	492	0.95

Sequence Information

Coding Sequence: ATGCTAAAATTTTACAGACCAGCAGATCCAGATCTCTTGCCTTCTTCATCCAGCAGCAAGTCAGAACCATATGACTTCGAAATGAAGACTGAAGAGGAGATCAAACAAGAACAACTTATATTGGATGACAGTTCATCTGAtCCTCAAGAAGATTTAGCTAGTTCAAATATTTCTCAATGCCTTATTGGTGATCCTTTGGATTCCAGTAACCAGACcttgaattatttaaatatcgataataaatttaaatatgaATCAAAAGCCACTAAAGATAATCAGTTTCAGTGTGAGCAGTGTACTTTTCGAGGTAAAAATAAGCATTACCTAAAGGCTCATATGATCATCCATAAAGATGAAAATGAGGTCATCTGGGTTCCATGCAAGCATTGCAAATTTAGAACGAAATATAAATATAGTTTAAGAAAACACATGGTAACACATAAAGACATAAGTGAAGTATCGTCGTATCAATGTGATGAGTGTAGTTATAAGACCAAACATAAAAATTGCTTAGATCAACATATGATCATCCATATAGAcgaaaacgagattaagtggCATCCATGCCAGCATTGCACATATAAAGCGAAACGGAAAGaggatttaaaaaaacacatgcTTGCACAACATAAAGATATAATCATAAAATTGGAACTAAAAGGCTTCAAAATAAAAGCTAAAGATGAAAACGAGGTTATCTGGTTTCCATGCAAGCATTGCAAATTTagaactaaatataaaaaaagtttaataaaacacaTGGTAACACATAAAGACATAAGTGAAGTAGAGTGGTTTCGATGTAATGAGTGTAGTTATAAGACCAAACATAAAAATTGCTTAGAAAATCATATGAtcatccataaagacgaaaacgagattaagtggGTTCTATGCGAGCATTGCATATATAAAGCGAAACGGAAAGCTGATTTAAAACGCCACATGCTTGCACTACATAAAGATATAATCATAAAATTGGAACTAAAAGGCTTCAAAATAAAAGCTAAAGATGAAAACGAGGTCATCTGGTTTCCATGCAAGCATTGCAAATTTAGAACGAAAAATAAATATCGTTTAGAAAAACACATGATAACACATAAAGACATAAGTGAAGTAGAGGTGTTTCGATGTAATGAGTGTAGTTATAAGACCAAACATAAAAATTGCTTAGAAAATCATATGAtcatccataaagacgaaaacgagattaagtggGTTCTATGCGAGCATTGCACATATAAAACGAAACGGAAAGGTGATTTAATAAAGCACATGCTAAAACATAAAGACATGAGTGAAGTAGAGTGGCTTCAATGTAAACAATGTAGTTATAGGACCAAATATAAGAGTTACTTGCAACAGCATATGCtcatccataaagacgaaaacgagattaagtggATTCTATGCCAGCATTGCACATATAAAGCGAAACGGAAACCTAATTTAAAACGCCACATGCTTGCACAACATAAAGATATAATCATGATATTGAAACTAAAAGACTGCAAAATAAAAGCTGAAGATGAAATCAAGCAGGAGAAGCCTACGTTTGATGGCAGCTCATCTACACCGGCAGATCCAGATCCTGTGTCTTCTTCATCCAGCAGCATAAAGTTGGAACCATATGACTTCGAAATAAAAACTGAAGAGGTTATCAAGCACGAAGAACTTAAGTAA
Protein Sequence: MLKFYRPADPDLLPSSSSSKSEPYDFEMKTEEEIKQEQLILDDSSSDPQEDLASSNISQCLIGDPLDSSNQTLNYLNIDNKFKYESKATKDNQFQCEQCTFRGKNKHYLKAHMIIHKDENEVIWVPCKHCKFRTKYKYSLRKHMVTHKDISEVSSYQCDECSYKTKHKNCLDQHMIIHIDENEIKWHPCQHCTYKAKRKEDLKKHMLAQHKDIIIKLELKGFKIKAKDENEVIWFPCKHCKFRTKYKKSLIKHMVTHKDISEVEWFRCNECSYKTKHKNCLENHMIIHKDENEIKWVLCEHCIYKAKRKADLKRHMLALHKDIIIKLELKGFKIKAKDENEVIWFPCKHCKFRTKNKYRLEKHMITHKDISEVEVFRCNECSYKTKHKNCLENHMIIHKDENEIKWVLCEHCTYKTKRKGDLIKHMLKHKDMSEVEWLQCKQCSYRTKYKSYLQQHMLIHKDENEIKWILCQHCTYKAKRKPNLKRHMLAQHKDIIMILKLKDCKIKAEDEIKQEKPTFDGSSSTPADPDPVSSSSSSIKLEPYDFEIKTEEVIKHEELK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00169866; iTF_00169884; iTF_00169910; iTF_00169837;
90% Identity: iTF_00169866;
80% Identity: -