Aaen061995.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aspidapion aeneum
Gene Symbol
-
Assembly
GCA_963576565.1
Location
OY755045.1:77990242-78000427[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2.6 3.2e+02 4.1 0.6 11 23 162 174 158 174 0.91
2 16 0.0026 0.32 13.6 4.8 1 23 183 205 183 205 0.98
3 16 0.00023 0.029 16.9 3.5 1 23 220 242 220 242 0.98
4 16 0.0018 0.22 14.1 1.5 3 23 253 274 252 274 0.95
5 16 0.00066 0.081 15.5 5.3 1 23 299 321 299 321 0.98
6 16 0.002 0.24 14.0 3.2 1 23 330 352 330 352 0.98
7 16 0.0039 0.48 13.0 2.0 3 23 363 384 362 384 0.95
8 16 0.98 1.2e+02 5.5 9.8 1 23 409 431 409 431 0.98
9 16 0.0065 0.8 12.3 6.2 1 23 440 462 440 462 0.98
10 16 0.0063 0.77 12.4 2.0 1 23 471 494 471 494 0.92
11 16 0.0038 0.46 13.1 4.9 1 23 519 541 519 541 0.98
12 16 0.015 1.9 11.2 5.7 1 23 550 572 550 572 0.98
13 16 0.0048 0.59 12.7 4.1 3 23 583 604 582 604 0.95
14 16 0.0034 0.42 13.2 6.3 1 23 629 651 629 651 0.98
15 16 0.015 1.9 11.2 5.7 1 23 660 682 660 682 0.98
16 16 0.0059 0.73 12.4 2.3 3 23 693 714 692 714 0.95

Sequence Information

Coding Sequence
ATGAATCTGGAACTAACAGACTTCAAAATAGAAGCTGAAGGTGAGATCAAGCAGGAGAAGCCTATGTTGGATGGCAGCTCATCTAAGATGGCAGACTCAGATCATATACCTTTATCATCCAATTTGAAGTCAGAACTAAATGAAAATGAGACAAATCAAGTGGAGATTACTCTGGATGATATTTTTTCTGGACCAGCAGATCCAGATCTCTTGCCTTCTTCATCCAGCAGCAAGTCAGAATCATATGACTTCGAAATGAAGACTGAAGAGGAGATCAAACAAGAACAACTTATATTGGATGACAGTTCATCTGAcCCTCAAGAAGATTCAGCTAGTTCAAATATTTCTCAATGCCTTATTGGTGATCCTTTGAATTCCAGTAACCAGACcttgaattatttaaatatcgataataaatttaaatatgaATCAAAGGCCACTAAAGATAATCAGTTTCAGTGTGAGCAGAGTAATTTTCGAGGTAAAAATAAGCATTACCTAAAAGCTCATATGATCATCCATAAAGATGAAAATGAGGTCATCTGGTTTCCATGCAAGCATTGCAAATTTAGAACGAAATATAAATATAGTTTAATAAACCACATGGTAACACATAAAGACATGGTAACACATAAAGACATAAGTGAAGTATCGTCGTATCGATGTGATGAGTGTAGTTATAAGACCAAACATAAAAATAGCTTAGAAAAACATATGCtcatccataaagacgaaaacgagattaagtggGTTCTATGTCAGCATTGCCCATATAAAGCGAAACGGAAAGGGGATTTAAAACGCCACATGCTTGCACAACATAAAGATATAATCATGAAATTGGAACTAAAAGACTTCAAAATAAAAGCTAAAGATGAAAACGAGGTTATCTGGTTTCCATGCAAGCATTGCAAATTTAGaactaaatataaatataatttaataaaacacATGGTAACACATAAAGACATAAGTGAAGTAGAGTCGTTTCGATGCAATGAGTGTAGTTATAAGACCAAACGTACAGATTGCTTAGAAAATCATATGAtcatccataaagacgaaaacgagattaagtggGTTCTATGCGAGCATTGCACATATAAAGCGAAAcggaaaggtaatttaaaaaaccacatgCTTGCACAACATAAAGATATAATCATAAAATTGGAACTAAAAGGCTTCAAAATAAATGCTAAAGATGAAAACGAGGTCATCTGGTTTCCATGCAAGCATTGCAAATTTAGAACGAAATATAAATGTTGTTTAATAAACCACATGGTAACACATAAAGACATAAGTGAAGTATCGTCGTATCGATGTAATGAGTGTAGTTATAAGACCAAACATAAAAATTGCTTAGAACAACATATGCtcatccataaagacgaaaacgagattaagtggtttcTATGCCAGCATTGCACATATAAAGCGAAACGGAAAGGGGGTTTAAAACGCCACATGCTCGCACTACATAAAGATATAATCAAAAAATTGGAACTAAAAGGCTTCAAAATAAAAGCTAAAGATGAAAACGAGGTCATCTGGTTTCCATGCAACCATTGCAAATTTAGAGCGAAAAATAAATATCGTTTAAGAAAACACATGATAACACATAAAGACATAAGTGAAGTAGAGTGGTTTCGATGTAATGAGTGTAGTTATAAGACCAAACATAAAAATTGCTTAGTAAATCATATGAtcatccataaagacgaaaacgagattaagtggATTCTATGTCAGCATTGCACATATAAAACGAAACGGAAACGTGATTTAAAACGCCACATGCTTGCACAACATAAAGATATAATCATAAAATTGGAACTAAAAGGCTTCAAAATAAAAGCTAAAGATGAAAACGAGGTCATCTGGTTTCCATGCAAGCATTGCAAATTTAGAGCGAATGATaaatatcatttaaaaaaacacatggTAACACATAAAGACATAAGTGAAGTAGAGTGGTTTCGATGTAATGAGTGTAGTTATAAGACCAAACATAAAAATTGCTTAGTAAATCATATGAtcatccataaagacgaaaacgagattaagtggGTTCTATGTCAGCATTGCACATATAAAGCGAAACGGAAAGGTGATTTAAAACGCCACATGCTTGCACAACATAAAGATATAAGCATGATATTCAAACTAAAAGACTGCAAAATAAAAGCTGAAGATGAAATCAAGCAGGAGAAGCCTACGTTTGATGGCAGCTCATCTAaACCGGCAGATCCAGATCCTGTGTCTTCTTCATCCAGCAGCATAAAGTTGGAACCATATGACTTCGAAATAAAAACTGAAGAGGTTATCAAGCACGAAGAACTTCAGTAA
Protein Sequence
MNLELTDFKIEAEGEIKQEKPMLDGSSSKMADSDHIPLSSNLKSELNENETNQVEITLDDIFSGPADPDLLPSSSSSKSESYDFEMKTEEEIKQEQLILDDSSSDPQEDSASSNISQCLIGDPLNSSNQTLNYLNIDNKFKYESKATKDNQFQCEQSNFRGKNKHYLKAHMIIHKDENEVIWFPCKHCKFRTKYKYSLINHMVTHKDMVTHKDISEVSSYRCDECSYKTKHKNSLEKHMLIHKDENEIKWVLCQHCPYKAKRKGDLKRHMLAQHKDIIMKLELKDFKIKAKDENEVIWFPCKHCKFRTKYKYNLIKHMVTHKDISEVESFRCNECSYKTKRTDCLENHMIIHKDENEIKWVLCEHCTYKAKRKGNLKNHMLAQHKDIIIKLELKGFKINAKDENEVIWFPCKHCKFRTKYKCCLINHMVTHKDISEVSSYRCNECSYKTKHKNCLEQHMLIHKDENEIKWFLCQHCTYKAKRKGGLKRHMLALHKDIIKKLELKGFKIKAKDENEVIWFPCNHCKFRAKNKYRLRKHMITHKDISEVEWFRCNECSYKTKHKNCLVNHMIIHKDENEIKWILCQHCTYKTKRKRDLKRHMLAQHKDIIIKLELKGFKIKAKDENEVIWFPCKHCKFRANDKYHLKKHMVTHKDISEVEWFRCNECSYKTKHKNCLVNHMIIHKDENEIKWVLCQHCTYKAKRKGDLKRHMLAQHKDISMIFKLKDCKIKAEDEIKQEKPTFDGSSSKPADPDPVSSSSSSIKLEPYDFEIKTEEVIKHEELQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00169878;
90% Identity
-
80% Identity
-