Ajap015429.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Asobara japonica
Gene Symbol
Hr39
Assembly
GCA_017141405.1
Location
JADHZF010000097.1:269550-273514[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.5 1.5e+04 -4.3 5.9 94 163 216 283 135 303 0.54
2 4 0.3 3e+03 -2.0 3.4 57 130 307 379 283 413 0.61
3 4 4.3e-08 0.00044 20.5 0.0 1 21 474 494 474 502 0.92
4 4 5.4e-71 5.5e-67 227.7 0.1 196 408 595 802 583 802 0.96

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGCTCCCACCGATGGTCCAGGCTGGTGGCCACCGGCCCAGCCATGGAAGAGCTCGTCTACCAGCGCTGGCACTTCGGTGGTAACACGCAATCTCGAGACTGGTAAAAACGTGTCTGTGACGACCATCAACGTGCCACCCGTACAGGATATGCATGATGGTAAAAGCGTCAAATACCTCGCGGGTCAAAATGGTGTTACAGTCTCTGTGGTCTCCTCATGCAGTAGTCCCAGCATCCCCGCTCCAGACCCAAGTCCCGAACTCGAGGACAGCGATGGTGAGGTATCTAAAATCGACTTTCGCGGTGTAAATCTACGTACTAAAAAGAAGCGCGATGGTGATCCAGAATTATCGACGGATGACTCTCACGAACAGCCGGAGCGTCCGATGTCATGGGAGGGTGAGCTCTCCGATCAAGAGATGTCCTCCACAACTCTCACCAATCAGGAACTCGAGGAGACGTCAATGGAGGGTGTCCAGGTCTGCAGTACATCCCCCGGTCCCGATCAAAAGTTCCCGATAAAGTCCGAACCGGATTTCCGCTCGAGTCCAGGTGTACACCACGGCAATGACTCCACCATGCCTCTCCAAGGTCTGCATCCCCAGCAAAGCCACGCCCCTCGGGACCTGGAGCATCCACAGAGTGACCTACCCTTACTTGTAGGAAAGCTCCTAGGAGGATACAATTCTTCAACACCCAACCATAGTCCGATTTTGAATCCTCGTCATCATCTGCAGAAGCACAGTCACACGAGATCCCAAGTTCCATCTCCAGATTCGGCAATTCACTCAGCATACTCAGTCTTCAGTTCGCCAACTCAATCGCCCCACGCCGCGAGACATAACGCACTAGGTGCCGGTAGTCCTGTACCCTCATCTTCGTTATCTATGTCCCGTCACAGTTTCAACAACTCAACCTCATCCCTCTCGCTCTCTCACTCTTTATCCCGCAACAACTCAGATGCATCCAGCAGCTGCTACAGCTATGGATCCCTCAGTCCACCCACCCACTCGCCCATTCAGCAACCCCGCCACCCACATGCCCATCATATAGCACAAGGCAGCCCCTTACACTTGCCAGGATCATCCAACGCTTACGCAAATCAAGATATTCCTGATATCCATGATGACCAGGAGGACTGCAAAATCCCGTCGGCACCTTCAGGGATATCCACACGCCAGCAGCTCATTAATAGCCCCTGTCCCATCTGCGGCGACAAGATAAGTGGCTTCCACTACGGCATATTCTCCTGTGAATCCTGCAAAGGATTCTTCAAGCGAACGGTTCAAAATAGAAAGAACTACGTATGCCTGAGGGGAGCCGGCTGCCCTGTCACAGTGGCTACCAGGAAGAAGTGTCCAGCCTGCAGATTTGATAAGTGCCTGAACATGGGAATGAAGCTGGAGGCCATCAGGGAGGACAGGACACGTGGTGGCAGAAGCACCTATCAATGCACCTACACACTGCCAGCTAATCTTATGGGGGGAAGTGCGGGAGTAAGTGGTGACAAGATGAATCCTGGGAACTGTAGTCCAGCGCCTGAGCATCATGCGCGACACCACTGGAATCATTCGCATAATAAAATGCAGGTTGTACCGCAACTCCTGCAGGATATCATGGATGTGGAGCATCTGTGGCATTATAATGATAATGACAGAGCGGGGCAAAATGGAGCGGGTGAGGGGGTACCTGGGACCAATGGAAATGTGGAGGAAGGTAGTCCTAGTCCTGGTCCAGCCAACAATCAGGAAACTACCGAGCAAACAGCTGGAGATAGTGCCCGGGCCAATGGCAACACGCAACCAGACTTTTTGTCGAATTTGTGCAATATTGCGGATCATAGGCTTTATAAGATTGTCAAGTGGTGCAAGAGTCTTCCACTGTTTAAGAATATATCCATTGATGATCAGATTTGTTTGCTCATCAATTCATGGTGCGAGTTGCTGCTGTTCTCGTGCTGCTTTAGGAGTATGAGTACACCAGGGGAGATTAGGGTGTCCCTTGGAAAGTCCATTACGCTGGAGCAGGCTAGGCAACTTGGGCTTGCTACGTGCATAGAGAGAATGCTGGCATTTACGAATAACTTGAGACGACTCAGGGTGGACCAATATGAATATGTGGCGATGAAGGTGATAGTACTTCTGACTTCTGACACGAGTGAACTAAAAGAGCCTGAAAAAGTGCGTGCTTCCCAGGAGAAGGCTCTCCAGGCCCTCCAGCAATACACGATAGCAAAGTATCCCGAGATGCCAGCAAAGTTTGGTGAGCTACTTCTCCGAATACCTGATCTCCAACGAACGTGTCAAGCTGGCAAAGAGCTCCTCAGTCAAAAGCGCGCAGAGGGCGAGGGCAGCTCCTTCAATCTACTGATGGAACTACTCCGAGGCGATCACTGA
Protein Sequence
MSEQNAPTDGPGWWPPAQPWKSSSTSAGTSVVTRNLETGKNVSVTTINVPPVQDMHDGKSVKYLAGQNGVTVSVVSSCSSPSIPAPDPSPELEDSDGEVSKIDFRGVNLRTKKKRDGDPELSTDDSHEQPERPMSWEGELSDQEMSSTTLTNQELEETSMEGVQVCSTSPGPDQKFPIKSEPDFRSSPGVHHGNDSTMPLQGLHPQQSHAPRDLEHPQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLQKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHNALGAGSPVPSSSLSMSRHSFNNSTSSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPIQQPRHPHAHHIAQGSPLHLPGSSNAYANQDIPDIHDDQEDCKIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLMGGSAGVSGDKMNPGNCSPAPEHHARHHWNHSHNKMQVVPQLLQDIMDVEHLWHYNDNDRAGQNGAGEGVPGTNGNVEEGSPSPGPANNQETTEQTAGDSARANGNTQPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIAKYPEMPAKFGELLLRIPDLQRTCQAGKELLSQKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00351044;
90% Identity
iTF_00168582;
80% Identity
iTF_00168582;