Ajap005722.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- TFIP11
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000006.1:4740283-4745782[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-102 7.1e-98 328.3 10.2 1 275 396 664 396 664 0.98 2 2 0.0033 49 4.1 0.1 244 272 678 706 669 709 0.86
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAAGTAGAACGATTTGAGATTTCGGATTATGATTTGGATAATGAATTCAATATTCATCGTCCACGGCGAAAGCTCACAAAACAGCAACAAATGTTGGGAGTTTGGGCTGACGATAGCGACGAGGAGGCCCCAGCAAGAGTGTTTCCGCCTTCCTTCAAGGGCGCGCCAAAAGCGCCAAAGAATTACACAGCGCCCGTGAATTTCGTAGCAGGGGGAGTCCAACAAGCCGGAAAGCCTAAAGAAGAAAATAAAGAAGAGGAGGATGATGATGACGATGACACTGGGAGGGCCAGACGAGGAGATGCTGATTATGTGCCAAATAGTTCCAGCGATTCCGAAACCGAGACGCCCAGAGCGGGTCCAGTGCGGCCGTCTCTTTCGATGAACCTTGAGGGTGACATCGCGGGTCTTCGTCGGAAACGGGCGCCAGTGAATCCCGCATTAATTCGATCTGGTGTGGGAGGTTGGGAAAAGCACACGAAAGGCATAGGTGCCAAGCTCCTGCTCCAGATGGGCTTCGAGCCTGGAAAAGGTCTTGGAAAAAAGCTTCAGGGTATCTCTGCACCTGTCGAGGCGCATCTTCGCAGAGGTAGGGGTGCCATTGGTGCGTATGGACCCGAGAAAAAAATCAAAGTGCCGGAGAAGGTGAAGGACGAGGATGAAGAGGAGGAAAAGCAGTTCAAGGTGAAGCTGTCCCAGTGGAGAAAAACTGATGTGTCTAGTACCAAAAAAAGGGTGAAGTATAGTTATCGAAGTGTGGACCAGGTCCTCGAGGATGGAAAACTTCGGCCGAATATCAAGGCCGGCTCCAGTGAGCTCAGCAAAGTCAAGGTCATCGACATGACAGGCCCGGAGCAGAGAATTCTGAGTGGATATCATGCGATAGCTGGTCAAAAACGTCCGGACGATTCACCAGAGCCGAGCAAGCGTTCCCCAGTAAATTTTTCTCTCCCAGAGTTGCAGCATAATCTAAACCTTCTGGTAGACATGTGCGAGCAAGACATAATTCAGAATGACAGAAAGACTCGACACATGGGGGATCGTGTTGTGGCCCTCGAAGCGGAGAAGAAAAACATTTGCAAAATTGTGGATCATCACGAGAAGCTCGTAGATACCCTGGAGAATGTCCTCGCAATTGTGGATAAGCTCATGGACAAAAACGATGACTTGTCATTGAAAGAAACTGCTGAGGCCTTCAAGAAGCTCCAGGAGAGGTATTACGAGGAGTACAAAATGTACGATTTGGGCGAGCTAGCTAGCAGTTTCGTAGGTCCCAAAGTGAAGGACTACCTGGGGACCTGGAATCCCTTAGGGGACCCCAAGCTGCCGGTGAGCATCATGAAAGAATGGAAGGACATTCTGGAAACTGGGACAAGCTCTCTGCAAGTTAGAAATGGAATTCATCCGTATGATCAGCTCATATGGAATGCTTGGATGCCATCCATGAGGGGCGCTGTCCAGCAATGGACCTGCAGGGATTCAGACCCGCTGATAGAATTAATCGAGTGTTGGATGCCCATTCTGCCCTCTTGGATTCTGGAGAACATTCTGGACCTTTTGGTTCTACCAAAATTGACCCTAGAAGTTGAAGAGTGGAATCCCCTGACCGACACAGTGCCCATTCACACGTGGATCCATCCCTGGCTACCCCTCATGGGCAATAGGATGGACACCCTCATTTATCCTATTATCAGGAGAAAATTAGGATCCGCCCTTGGAGGCTGGCATCCCTCGGATCGATCGGCCCGACTCATGCTGCAACCCTGGTCTGAAGTATTCTCGAAAGGGGATATGGAGGCTTTCCTCGTTAAAAACATCGTTCCTAAATTGCAAATAGCCCTTTCGGAATTTGTCATCAATCCCCATCAGCAGCATCTGGACCACTGGAACTGGGTCTTCGAGTGGGCCACGCTTTTACCAGCCCATATTATGGTTGGACTTCTCGACAAATTTTTCTTCCCCAAGTGGCTCCAGGTCCTTGCTATGTGGCTCAATCATTCACCTAATTACGACCAGATTACCCATTGGTACATGGGATGGAAAAATATGCTCAGTGACAAATTACTTGCTGAACCTCTCATCAAAGATCACTTCAAAAAGGCGTTAGATATGATGAATCGTGCAGTGTCGACTCCCCAGGGTCACCAACCTGGTGCCATGGAACAAGTGTCTTACTTGACGAGTTTAGAACGCACACAACCAACGATGACACAAATTCCAGCAACGGCGCAGCCGAGAATCGAGAGATTTGCGGAAGTTGTAAGGACCGCATCGCAGATACCTCAAGGATTCAAGGACCTGGTTCTGAAAAAATGCGAAGAGCGTGGAATTCTCTTCATGCCAATTCCGAATCGATACAGGGAGGCTAAACAAGTGTACAAAGTTGGCAATGTGCAGGCGTACATTGACGGAAACGTCCTGTTCGTCTGTCACAATGGCACTAACTGGGTTCCCACTCATCTCAATGCACTTTTGGACATGGCGGAGCTTTAA
- Protein Sequence
- MSDDEVERFEISDYDLDNEFNIHRPRRKLTKQQQMLGVWADDSDEEAPARVFPPSFKGAPKAPKNYTAPVNFVAGGVQQAGKPKEENKEEEDDDDDDTGRARRGDADYVPNSSSDSETETPRAGPVRPSLSMNLEGDIAGLRRKRAPVNPALIRSGVGGWEKHTKGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRRGRGAIGAYGPEKKIKVPEKVKDEDEEEEKQFKVKLSQWRKTDVSSTKKRVKYSYRSVDQVLEDGKLRPNIKAGSSELSKVKVIDMTGPEQRILSGYHAIAGQKRPDDSPEPSKRSPVNFSLPELQHNLNLLVDMCEQDIIQNDRKTRHMGDRVVALEAEKKNICKIVDHHEKLVDTLENVLAIVDKLMDKNDDLSLKETAEAFKKLQERYYEEYKMYDLGELASSFVGPKVKDYLGTWNPLGDPKLPVSIMKEWKDILETGTSSLQVRNGIHPYDQLIWNAWMPSMRGAVQQWTCRDSDPLIELIECWMPILPSWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMGNRMDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSEVFSKGDMEAFLVKNIVPKLQIALSEFVINPHQQHLDHWNWVFEWATLLPAHIMVGLLDKFFFPKWLQVLAMWLNHSPNYDQITHWYMGWKNMLSDKLLAEPLIKDHFKKALDMMNRAVSTPQGHQPGAMEQVSYLTSLERTQPTMTQIPATAQPRIERFAEVVRTASQIPQGFKDLVLKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIDGNVLFVCHNGTNWVPTHLNALLDMAEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00047960;
- 90% Identity
- iTF_00351011;
- 80% Identity
- -