Ajap010766.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- lilli
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000007.1:1780092-1795726[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-06 0.058 13.4 0.0 44 129 51 131 48 142 0.58 2 2 2.7e-08 0.00083 19.5 0.3 332 380 212 263 192 275 0.79
Sequence Information
- Coding Sequence
- ATGGTGAAGGTGAAGTTAGGCGAGGTCGTGACGGACGTGAAAACCCTGACCTGGTCATATCCCTCCCTTGCGCCCACACCTTCCATCCTTCTCGTAGCTCACGCATACAATAAAATGAATGATATCAATGAGGTGAATCCGGACGCGCAAGATCGTGCAACTCAGCAGATCCAGTCAAAATTGGGCAATTACTCGCGTGTAAAGCATCTGCTTGTTGAGCCACAAATGCTCTTTGGTGTTATTGATGTGCCTCCAAGTCCAGCGCCAGCATCAGGTGCGCCGGTTCGCCTCCAAAGTAGAAGCAATTGTCCAAGTTCACCATCAACTCAAGAATTTAAGAAGCCCGGCCCCAATGGTCCACGAGGCACATCATCAGGTAGCCACACATCGCAAAGAGGTGGTTTTGTTAAACCAGCCGATGGTAAACCACCCTATGGTGGACGCGGTGGTTATCCAGGCCAACCGGTTAAACATGGTGGTAATAGCAATGATCACAGAAGCCACGGTATTATACCAGCAAAGGGACCACCACTTGGTGCTAGTGGCAATTCAGCCGGAAACAGCGCTGGCCCTGCCTCTTCCGGTAACTGTCCTCCTTTGACTAGTAACACGAGAATTCACGGTGCTGGATCCAAGATCGCTAAGCAACCCATTGATAATGGAATGAGACACGATCTCAATGACAGCGCCGACCTCGAGAATATACTCAAGGAAATGACGATGCCACCTACACCTCTGACGGCTATCGCACAAACACCAAGGAAGGAAACAGAGTCTAAGTATACATTAAATGATCTTCTGGATAAGATGACTGAAGTGCCACCAGTGGACTCTTCCAAACCACCACGTGAGTTACAAAATAATATCAATAAATTATTACGCTACTTGACTGTACGATCGCATTATTTGGATTGTATGAATGTGCGTGGGTAG
- Protein Sequence
- MVKVKLGEVVTDVKTLTWSYPSLAPTPSILLVAHAYNKMNDINEVNPDAQDRATQQIQSKLGNYSRVKHLLVEPQMLFGVIDVPPSPAPASGAPVRLQSRSNCPSSPSTQEFKKPGPNGPRGTSSGSHTSQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGIIPAKGPPLGASGNSAGNSAGPASSGNCPPLTSNTRIHGAGSKIAKQPIDNGMRHDLNDSADLENILKEMTMPPTPLTAIAQTPRKETESKYTLNDLLDKMTEVPPVDSSKPPRELQNNINKLLRYLTVRSHYLDCMNVRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -