Ajap016414.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- -
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000331.1:122002-124949[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-10 1.5e-07 31.7 0.0 4 38 18 52 16 56 0.89
Sequence Information
- Coding Sequence
- ATGGTTGGCAAATATCGAAGAACAACGGATCGTCAATCGTGGCAATCCGGTTCAATGCAACAAGCTATTGAAGATGTAAATGCAAACACATTGAGTTTTCGGCAAGCTGCAAAACGATATGGAGTTCCAGCAACCACTTTATTCAGACGTACCAAGAAGTACCAGGAGGATGGATCCATAGCAAATGCTGTAAAAAGAGAGTTGGGACACTTCAAACCAGTCTTTACTGAAGAGCAAGAGAAGAAATTGACTAGTTATTTGCTTTGCATGGAGAATCGCATGTATGGGCTCACACCTGGGGAAATAAGGGAACTTGGATATGAATTGGCCAAGAGGAATCAAATCAAACACCCATTTAACCAGGAGAAGCAGAGGGCCGGTCCAGATTGGTTGAGAGGATTCATGAAAAGAGGGAAACTGTTATCAATACGCAAGCCGGAAGCAACGTCTACTGCTCGAGCCAAGGGGTTCAGTCGAGAAAAGGTCGGTGAATTTTTTGATGTGTTTGAGGAGATAATGGAGAAGTATAATTTCGGGGCAGATCGGCTTTGGAATGTTGATGAAGTTGGGATGCTGCCTGTGCCAAAATGCCTGCCAAAAATCATTGGCAGAAAAGGCAAGAAACAAGTGGGAACAAGGACTTCAGCTGAAAGAGGTCAGCTCGTCACAGTTGAGATGTGTGTTTCAGCAGCGGGGGAACATATGCCTCCCATGTTTGTTTATCCAGGGAATAAAAATGCTGCTATTCCCAATGACTACACAGTTGGCGCACCGCAAGGCAGCACATTCGTCAGGACGCCCAAGGGCTGGATAGACAGAGAAACTTTTTATATTTGGTTCAAAAAGTTTGTGGGTTTTGCTAGGGCATCAGTCAATGATCCGGTGGGATTGATATGTGATGGTCATCCATCACATAAATACAACCTGGAGGTACTTCAATATGCTGCTACTAACGGTGTAATTATCATTTGTCTTCCACCGCACTGCACTCACCGACTGCAACCATTAGACGTTACGTGCATGCGTCCATTGCAAACAGCCTATGCGAATGCTGTTGCCATCTGGCTCCGCTCGCATGCCCCAAGAATTGTATGCCGCCAACAAATTGCAGAGTTGTTTGGAGAGGCTCTTCAGCGAGCATCAATTCAGCGTAATGCTATCAGTGGTTTCAGAGCATGTGGGATTTTCCTATTGAACAGGAATATTTTCACCGATGACAATTTCCTCGCAGGAGAGCCACTAGGTGGAGTCAGGGATGCTCCAGGGGTAGCCAGAGGTAAAAAACACCCAGAGAATGAGGCGAACGCTGAGAACGTGGAGAAAGAGAGGAACGCTGAGGATGGCGAGGACAATGGATCAGAGTCTGATATCCCAATCCCCTACTGGAGGAATGAAGCCTACTGGGATGGCTCTGGTTTTCGGCCAGCCAATAGTCATCAGCTCTCTGAAGATTCATCATCAGATGAGTCCACCGAACTCCTTAGGCCGCGGGCCAGTCATCGACGAGTTTATTGTCTTTCTTCGTCTGATGAGGATGTTGCAGGTGATGAGAATGGACAGTTTGACCACCTGAGTATTAGGGGAGATGATCAGGACGATGATGAGCCCAATGATGCTGGAGAAAAATTGTCGCAATCTCTAAGCGGACTCTCAGTTCATGACTTCCCACCTTTGAACCTAGACACTGCTCAATATACACAGTCTGGTGATGCAAACTCTGCTGGAGATACCTATGAAGTCGATGAGCCGAATGATGCTGGAGACGTATTGTCGCAACCTCTGAACTTTACATTTCCAAAAGCACCGTCACTGGATAAGCAATACACTTCTGATAATTCTGCAGATGAGCAAGTGTATGATCGGTTGCCTCATTCCCATCCCCCAGAATCAACCGCCTCAGGAGGAAACACCAAGGGAATTGTCGTGGTATCAGACGAGCCCCTCAGGAAGAGGATGAGAATTTTCTCTCAGTCGAGACCAGCTGAGGACAGACTTCCATCACCAATCTCACCAAGAGAATGGAGTCCACCTGAACGTTTCCATTCACCAATCTCGCTTACAGGTTCCCAATCCCCAATCTCACCAAGAGAATGGAGTCCAACTGAACGTTTCCATTCACCAATCTCGCCTACACGTTCCCAATCTCCAATCGCACCAAGAGATTTCAGTCCACCTGAACGTTTCTATTCCACAATCTCACCAAGAGATGTCAGTCCACCTGAACGTTTCCAATCATCCGAACTGGATGATCTGCCGTTATCAATGAGGTTAAGGCTAATTCAACACAATCCAACTACTCGTAGAGGTCGAGCAGAAGTTCTCACAAGAAAAGAGTATATTGATGGTTTAATTGAGAAGAAGGAGAAGAAGGAGAATCCTAAACCCAGAGGAAGGCCTAGAGGAAGGCCCAGAAGAAGCAGAAAACACCCCTAG
- Protein Sequence
- MVGKYRRTTDRQSWQSGSMQQAIEDVNANTLSFRQAAKRYGVPATTLFRRTKKYQEDGSIANAVKRELGHFKPVFTEEQEKKLTSYLLCMENRMYGLTPGEIRELGYELAKRNQIKHPFNQEKQRAGPDWLRGFMKRGKLLSIRKPEATSTARAKGFSREKVGEFFDVFEEIMEKYNFGADRLWNVDEVGMLPVPKCLPKIIGRKGKKQVGTRTSAERGQLVTVEMCVSAAGEHMPPMFVYPGNKNAAIPNDYTVGAPQGSTFVRTPKGWIDRETFYIWFKKFVGFARASVNDPVGLICDGHPSHKYNLEVLQYAATNGVIIICLPPHCTHRLQPLDVTCMRPLQTAYANAVAIWLRSHAPRIVCRQQIAELFGEALQRASIQRNAISGFRACGIFLLNRNIFTDDNFLAGEPLGGVRDAPGVARGKKHPENEANAENVEKERNAEDGEDNGSESDIPIPYWRNEAYWDGSGFRPANSHQLSEDSSSDESTELLRPRASHRRVYCLSSSDEDVAGDENGQFDHLSIRGDDQDDDEPNDAGEKLSQSLSGLSVHDFPPLNLDTAQYTQSGDANSAGDTYEVDEPNDAGDVLSQPLNFTFPKAPSLDKQYTSDNSADEQVYDRLPHSHPPESTASGGNTKGIVVVSDEPLRKRMRIFSQSRPAEDRLPSPISPREWSPPERFHSPISLTGSQSPISPREWSPTERFHSPISPTRSQSPIAPRDFSPPERFYSTISPRDVSPPERFQSSELDDLPLSMRLRLIQHNPTTRRGRAEVLTRKEYIDGLIEKKEKKENPKPRGRPRGRPRRSRKHP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00168311;
- 90% Identity
- iTF_00168323; iTF_00168316; iTF_00168321; iTF_00168311; iTF_00168322; iTF_00168333; iTF_00168332; iTF_00168320;
- 80% Identity
- -