Ajap008876.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- -
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000214.1:321842-324798[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-11 1e-08 35.5 0.0 3 40 17 54 15 57 0.93 2 2 7.9 4.5e+03 -1.8 0.0 11 30 410 429 402 430 0.78
Sequence Information
- Coding Sequence
- ATGGTTGGCAAATATCGAAGAACAATGGATCGTCAATCGTGGCAATCCGATTCAATGCAACAAGCTATTGAAGATGTAAATGCAAACACATTGAGTTTTCGGCAAGCTGCAAAACGATATGGAGTTCCAGCAACCACTTTATTCAGACGTACCAAGGAGCACCAGGAGGATGGATCCATAGCAAATGCTGTGAAAAAAAGAAATAGTGGAAGAACCTCAGTGTCTTGGAGTCCTCTTATCTGCTGGTGTTATCCTCGTGGATTCACTCGTTGTCTTCTGGATGTTACCAGGCACTTGTGGCAGTTGGGACACTTCAAACCAGTCTTTACTGAAGAGCAAGAGAAGAAATTGACTAGTTATTTGCTTTGCATGGAGAATCGCCTGTATGGGCTCACACCTGGGGAAATAAGGGAACTTGGATATGAATTGGCCAAGAGGAATCAAATCAAACACCCATTTAATCAGGAGAAGCAGAGGGCCGGTCCAGATTGGTTGAGAGGATTCATGAAAAGAGGGAAACTGTTATCAATACGCAAGCCGGAAGCAACGTCTGCTGCTCGAGCCAAGGGGTTCAGTCGAGAAAAGGTCGGTGAATTTTTTGATGTGTTTGAGGAGATAATGGAGAAGTATAATTTCGGGGCAGATCGGCTTTGGAATGTTGATGAAGTTGGGATGCTGACTGTGCCAAAATGCCTGCCAAAAATCATTGGCAGAAAAGGCAAGAAACAAGTGGGAACAAGGACTTCAGCTGAAAGAGGTCAGCTCGTCACAGTTGAGATGTGTGTTTCAGCAGCGGGGGAACATATGCCTTCCATGTTTGTTTATCCAGGGAATAAAAATGACTACACAGTTGGCGCACCGCAAGGCAGCACATTCGTCAGGACGCCCAAGGGCTGGATAGACAAAGAAACTTTTTATATTTGGTTCAAAAAGTTTGTGGGTTTTGCTAGGGCATCAGTCGATGATCCGGTGGGATTGATATGTGATGGTCATCCATCACATAAATACAACCTGGAGGTACTTCAATATGCTGCTACTAACGGTGTAATTATCATTTGTCTTCCACCGCACTGCACTCACCGACTGCAACCATTAGACGTTACGTGCATGCGTCCATTGCAAACAGCTCATGCGAATGCTGTTGCCATCTGGCTCCGCTCACATGCCCCAAGAATTGTATGCCACCAACAAATTGCAGAGTTGTTTGGAGAGGCTCTTCAGCGAGCATCAATTCAGCGTAATGCTATCAGTGGTTTCAGAGCATGTGGGATTTTCTCATTGAACAGGAATATTTTCACCGATGACAATTTCCTCGCAGGAGAGCCACTAGGTGGAGTCAGGGATGCTCCAGGGGTAGCCAGAGGTCAAAAACATCCAGAGAATGAGGCAAACGCTGAGAACGTGGAGAAAGAGAGGAACGCTGAGGATGGCGAGGCCAACGGATCAGAGTCTGATATCCCAACCCCCTACTGGAGGAATGAAGCCTACTGGGATGGCTCTGGTTTTCGGCCAGCTAATAGTCATCAGCTCTCTGAAGATTCATCATCAGATGAGTCCACCGAACTACTTAGGCCGCGGGCCAGTCATCGACGAGTTTATTGTCTTTCTTCGTCTGATGAGGATGTTGCAGGTGATGAGAATGGACAGTTTGACCACCTGAGTATTAGGGGAGATGACCAGGACGATGATGAGCCCAATGATGCTGGAGAAAAATTGTCGCAATCTCTAAGCGGACTCTCAGTTCATGACTTCCTACCTTTGAACCTAGACACTGCTCAAAATACACAGTCTGGTGATGCAAACTCTGCTGGAGATACCTATGAAGCCGATGAGCCGAATGATGCTGGAGACGTATTGTCGCAACCTCTGAACTTTACATTTCCAAAAGCACCGTCACTGGATAAGCAATACACTTCTGATAATTCTGCAGGTGAGCAAGTGTATGATCGGTTGCCTCATTCCCATCCCCCAGAATCAACCGCCTCAGGAAGAAACACCGAGGGAATTGTCGTGGTATCAGACGAGCCCCTCAGGAAGAGGATGAAAATTTTCTCTCAGTCGAGACCAGCTGAGGACAGACTTCCATCACCAATCTCACCAAGAGAATGGAGTCCACCTGAACGTTTCCATTCACCAATCTCGCTTACAGGTTCCCAATCCCCAATCTCACCAAGAGAATGGAGTCCACCTGAACGTTTCCATTCACCAATCTCGCCTACACGTTCCCAATCTCCAATCGCACTAAGAGATTTCAGTCCACCTGAACGTTTCTATTCCACAATCTCACCAAGAGATGTCAGTCCACCTGAACGTTTCCAATCATCAGAACTGGATGATCTGCCGTTATCAATGAGGTTAAGGCTAATTCAACGTGAAGCTGAACCTCAACCGAGCACATCTAGCAGAGGAGCTTTTGTCCATCATCCAGAGGATATTAAATCTATTAAATATGTAGACAATCCAACTACTCGTAGAGGTCGAGCTCGAGGTCGAGCAGAAGTTCTCACAAGAAAAGAGTATATTGATGGTTTAATTGAGAAGAAGGAGAATCCTAAACCCAGAGGAAGGCCCAGAAGAAGCAGAAAACACCCCTAG
- Protein Sequence
- MVGKYRRTMDRQSWQSDSMQQAIEDVNANTLSFRQAAKRYGVPATTLFRRTKEHQEDGSIANAVKKRNSGRTSVSWSPLICWCYPRGFTRCLLDVTRHLWQLGHFKPVFTEEQEKKLTSYLLCMENRLYGLTPGEIRELGYELAKRNQIKHPFNQEKQRAGPDWLRGFMKRGKLLSIRKPEATSAARAKGFSREKVGEFFDVFEEIMEKYNFGADRLWNVDEVGMLTVPKCLPKIIGRKGKKQVGTRTSAERGQLVTVEMCVSAAGEHMPSMFVYPGNKNDYTVGAPQGSTFVRTPKGWIDKETFYIWFKKFVGFARASVDDPVGLICDGHPSHKYNLEVLQYAATNGVIIICLPPHCTHRLQPLDVTCMRPLQTAHANAVAIWLRSHAPRIVCHQQIAELFGEALQRASIQRNAISGFRACGIFSLNRNIFTDDNFLAGEPLGGVRDAPGVARGQKHPENEANAENVEKERNAEDGEANGSESDIPTPYWRNEAYWDGSGFRPANSHQLSEDSSSDESTELLRPRASHRRVYCLSSSDEDVAGDENGQFDHLSIRGDDQDDDEPNDAGEKLSQSLSGLSVHDFLPLNLDTAQNTQSGDANSAGDTYEADEPNDAGDVLSQPLNFTFPKAPSLDKQYTSDNSAGEQVYDRLPHSHPPESTASGRNTEGIVVVSDEPLRKRMKIFSQSRPAEDRLPSPISPREWSPPERFHSPISLTGSQSPISPREWSPPERFHSPISPTRSQSPIALRDFSPPERFYSTISPRDVSPPERFQSSELDDLPLSMRLRLIQREAEPQPSTSSRGAFVHHPEDIKSIKYVDNPTTRRGRARGRAEVLTRKEYIDGLIEKKENPKPRGRPRRSRKHP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00168321; iTF_00168333; iTF_00168322; iTF_00168330; iTF_00168332; iTF_00168316; iTF_00168323; iTF_00168324; iTF_00168320;
- 90% Identity
- iTF_00168324;
- 80% Identity
- -