Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000641.1:183017-186984[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 5e-06 0.012 16.4 0.1 13 43 175 202 170 203 0.89

2 10 2.6 6.4e+03 -1.9 0.5 18 40 236 255 233 259 0.76

3 10 0.0012 3 8.7 0.8 5 32 264 296 261 300 0.81

4 10 0.013 32 5.4 0.1 14 40 303 326 300 328 0.86

5 10 0.012 29 5.6 0.5 9 28 331 349 327 360 0.77

6 10 0.017 42 5.1 2.3 13 41 390 415 379 417 0.80

7 10 0.8 1.9e+03 -0.3 3.0 15 38 420 440 411 444 0.69

8 10 0.0011 2.7 8.9 2.8 13 43 446 473 435 474 0.79

9 10 0.16 3.8e+02 2.0 0.0 19 29 481 491 479 499 0.86

10 10 0.0084 21 6.1 4.2 18 44 514 537 496 537 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	5e-06	0.012	16.4	0.1	13	43	175	202	170	203	0.89
2	10	2.6	6.4e+03	-1.9	0.5	18	40	236	255	233	259	0.76
3	10	0.0012	3	8.7	0.8	5	32	264	296	261	300	0.81
4	10	0.013	32	5.4	0.1	14	40	303	326	300	328	0.86
5	10	0.012	29	5.6	0.5	9	28	331	349	327	360	0.77
6	10	0.017	42	5.1	2.3	13	41	390	415	379	417	0.80
7	10	0.8	1.9e+03	-0.3	3.0	15	38	420	440	411	444	0.69
8	10	0.0011	2.7	8.9	2.8	13	43	446	473	435	474	0.79
9	10	0.16	3.8e+02	2.0	0.0	19	29	481	491	479	499	0.86
10	10	0.0084	21	6.1	4.2	18	44	514	537	496	537	0.87

Sequence Information

Coding Sequence: ATGGATAACTCCGTGATGGTAATACCCGTTAAAACGGAGGCAACTGACGTGAAATCGGAGGCCCTCGAGACCGCGGAGCATGTCGAAACGGTGGGGAATGCCGAAGTACACACGGTCATCCTGCAGAATATACAGTTACATGACGGAGAGGAGCTTCCTGTGATCCTGAACGATTTCTCTCAGAACAACTCGGATGGAAACCTGGAAATTGCCATGGAAGACGACGTCATCCACACCTACATAATAGATAATAGGGAATACGAACCCCACGGCGGAGAGGAGATTATATACGAGGAGCAAGACGGAGAAGAGAGCACGGTCCACTATGTTATCGAGGAGCACACGGAATTCGTGGATGGCAACGAGTCTGTCGTGGAGAGCAACGAGTACAACGACAACTCTATGGAGTACACATTCATGGAAAACGAGGAGTACTTAGACGACCCGTCCGAAGAACAGCTGCCGGCTGAAGAAGTCCAGGAGGCCATAGAAGCGGCCAACATCAAGAAGGAGGACGAGGCGATGGATCAGATGCTGGAATGTGACATTTGCAACAAGGCTTTTAAAACTACCGCGGGTCTCAAGAGGCATATCACGGTCAATCACGGCGACAAAGACAACACGGAGGAGGAGGACCCTCTTACGTTCCAGTTATGCCCCTGTTGCGGAGAACCGTCCGATTCGGCTCATACCATAGGCGACTTCAAGTGTGAACAGTGTGACAAGCTGTTCGTGCAGCAGAACTGCCTCGATCGCCACTGCAGCATCGAACACCCCGAGCAGATCATCGATCACATGCGAATACACCCGCTCAAGTCCGTAAAGTGCCTGGGCTGCAGCAGGGAATTCTCCAGGAAGTACCACCTGGACAGACACATCGGCCAGACCGGTTGCATGGGGCTTCCTAGGAAGGCGTTCGATTGCAGAGTGTGCAAGCGGTTCTTCACCCGGAAGGACAACCTCGCCGAGCATCTCAGGGGACACGCGGGCCAGGCCAAGAAGAAGAAGACCTTCAACTGCGAGTTCTGCGGCAAACAGTTCCAAGGCTATGCGCTGCTCAGCATTCACACCCGCACCCATACAGGGGAGAGGCCGTACCCCTGCGACCTGTGTCCCAAGAAGTTCCCCTCGAGCGCGGCGATGAAGAAACACCGTCGGATGCACACCGGAGAAAAGCCGTACAAATGCGAAAAGTGCGCCAAGAAGTTCGCCGCGAAGGAGACCCTGAACCGCCACATGCGCACCCACACGGGGGAGAAACCCCACCAGTGCCAGTTCTGCGGCAAGTCCTTCATCCAGGCGTCGCAGCTGCGGGCCCACATCTTCCATCACACCGGCGAGAACGCCTTCACTTGCCCGCACTGCGGTCGCGCGTTCAACAGGAAACTCAGGCTGACCACCCACATCAAGTACATGCACGAGGGGGCCGAGCCGCTGCCGTGCCCCCACTGCGAGAAGACCTTCTTCAGGAAGGAGGACGTCGCGCGGCACGCGCTCTGCCACAGCGGCGAGAGACCGTTTGTGTGCGAGGTCTGCCAGAACTGCGACACGTGCGGGCGCGCCTTCATCCGCCAGGACTGCCTGATGCGGCACATCCGCGCCAGGCACCGCGACGTGCTCGAGGACATCATGGCGAGCGCGGAGAAGAAGCGCCTGCAGCAGCAGCTGCTCAGCGCCGCCACGGACGCGGCGTCGCGCGGCGGCCTCGCCGAGAACGTCGTCTGGAACGAGCTGACGCTCACCGAGTCCATCAAGGAGCTGCTCACGCTGCTCGTCGACGAGGAGTGCCTCGCCGAGTTCGGGTATCCGGACGCGCCCGTCGACAAGGTGCTCAACTCGGTGATCAAGCGGTGCGGCCACAAACCCGCGTCCGAGGAGGACTTTGACTACATCGGCAGGATGCGGGAGAACGCCAAGCTGCTGTTCACCGTGGTGATCGACGACGAGGCCGTCAAGGAGCTGCTGAACAACCAGACGGTCGACGAGGTCATCCTGCACGTGCTGCGCCTGGCCAAGAAACAGAACCCGAGCTAA
Protein Sequence: MDNSVMVIPVKTEATDVKSEALETAEHVETVGNAEVHTVILQNIQLHDGEELPVILNDFSQNNSDGNLEIAMEDDVIHTYIIDNREYEPHGGEEIIYEEQDGEESTVHYVIEEHTEFVDGNESVVESNEYNDNSMEYTFMENEEYLDDPSEEQLPAEEVQEAIEAANIKKEDEAMDQMLECDICNKAFKTTAGLKRHITVNHGDKDNTEEEDPLTFQLCPCCGEPSDSAHTIGDFKCEQCDKLFVQQNCLDRHCSIEHPEQIIDHMRIHPLKSVKCLGCSREFSRKYHLDRHIGQTGCMGLPRKAFDCRVCKRFFTRKDNLAEHLRGHAGQAKKKKTFNCEFCGKQFQGYALLSIHTRTHTGERPYPCDLCPKKFPSSAAMKKHRRMHTGEKPYKCEKCAKKFAAKETLNRHMRTHTGEKPHQCQFCGKSFIQASQLRAHIFHHTGENAFTCPHCGRAFNRKLRLTTHIKYMHEGAEPLPCPHCEKTFFRKEDVARHALCHSGERPFVCEVCQNCDTCGRAFIRQDCLMRHIRARHRDVLEDIMASAEKKRLQQQLLSAATDAASRGGLAENVVWNELTLTESIKELLTLLVDEECLAEFGYPDAPVDKVLNSVIKRCGHKPASEEDFDYIGRMRENAKLLFTVVIDDEAVKELLNNQTVDEVILHVLRLAKKQNPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00166287;
90% Identity: iTF_00166287;
80% Identity: iTF_00166287;