Basic Information

Insect: Arma custos
Gene Symbol: ZFX
Assembly: GCA_037127475.1
Location: CM073759.1:11866733-11875350[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.026 62 5.9 0.0 21 48 6 33 3 35 0.92

2 10 0.00026 0.63 12.2 0.1 17 49 31 63 27 67 0.89

3 10 0.13 3.1e+02 3.6 0.2 18 44 61 87 59 93 0.78

4 10 0.00033 0.8 11.9 0.3 21 49 93 121 88 125 0.89

5 10 0.17 4.2e+02 3.2 0.6 18 48 119 149 118 153 0.83

6 10 0.15 3.5e+02 3.4 0.9 16 48 146 178 142 183 0.79

7 10 0.3 7.1e+02 2.5 0.1 21 48 180 207 176 209 0.83

8 10 0.0064 15 7.8 0.1 21 49 209 237 205 241 0.87

9 10 0.12 3e+02 3.7 0.2 18 44 235 261 233 266 0.78

10 10 0.02 47 6.2 0.1 21 48 267 294 262 298 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.026	62	5.9	0.0	21	48	6	33	3	35	0.92
2	10	0.00026	0.63	12.2	0.1	17	49	31	63	27	67	0.89
3	10	0.13	3.1e+02	3.6	0.2	18	44	61	87	59	93	0.78
4	10	0.00033	0.8	11.9	0.3	21	49	93	121	88	125	0.89
5	10	0.17	4.2e+02	3.2	0.6	18	48	119	149	118	153	0.83
6	10	0.15	3.5e+02	3.4	0.9	16	48	146	178	142	183	0.79
7	10	0.3	7.1e+02	2.5	0.1	21	48	180	207	176	209	0.83
8	10	0.0064	15	7.8	0.1	21	49	209	237	205	241	0.87
9	10	0.12	3e+02	3.7	0.2	18	44	235	261	233	266	0.78
10	10	0.02	47	6.2	0.1	21	48	267	294	262	298	0.86

Sequence Information

Coding Sequence: atggcctgtcataccggtgagaagccttttcaatgccctcattgtgattataaatcagcaggatctggaaatatgaaaaatcatataatgGCCCGCCATACCAGTGAGAAGCCTtttcaatgccctcattgtgattataaatctgtatcatctggaaatatgaaaaagcatgtaatggcccgtcatacaggtgagaagccttaCCAATGTCcctattgtgattataaatctgtggAATCTGGACAtttgaaaaatcatataatgGGCCATCATTCAGGTGAAAAGCCCCGTCATTGTCCTCAGTGTGATTACAAATATGTTTATTCTGGAAATTTGAAAAGACatataatggcccgtcataccggtgagaagccttttcaatgccctcattgtgattataaatctgtaacatctggacaTATGAATAACCATATACGAGCTCGTCATTCAGGCGTGAAGTCCTATCagtgtcctcattgtgattataagtcaGTACAAATAGGGAATTTGAATAGACATATAATGGCCCATCATACCAATGAGAAACCTtttcaatgccctcattgtgattataaatcagcaggatctggaaatatgaaaatacatataatgGCCCATCATACTGGTGAGAAGCCTtttcaatgccctcattgtgattataaatctgtatcatctggaaatatgaaaaagcatgtaatggcccgtcatacaggtgagaagccttaCCAATGTCcctattgtgattataaatctgtggAATCTGGACATTTGAAAAATCATATGATGGGCCATCATTCAGGTGAAAAGCCCCATCATTGTCCTCAGTGTGATTACAAATATGTTTATTCtggaaatttgaaaaaacacATAATTGCCTCGCATACAAgtCCTTCTATTTCTAGTGTTGCTGTAGTAAAAGAAATGACTGATAAATCTGAATCTTCTTTTAATGACCATATTCAACTGAAGCAGGAAGAACTACTCATCCCAGACGAAGCTCGGTCCTTTGGAGCAGTAGTGAGGTGCAAAGAAGCTCGTTTACAAATCCATAAGAAAGAAGGTGTAATGTCGAAATCTGAGAGCTTATGCAAACCCAGCAAAACGTCCTTCACAAAAAAGATATTGCAATGGCATGGTCTTCTCAGAAGTAGGTAA
Protein Sequence: MACHTGEKPFQCPHCDYKSAGSGNMKNHIMARHTSEKPFQCPHCDYKSVSSGNMKKHVMARHTGEKPYQCPYCDYKSVESGHLKNHIMGHHSGEKPRHCPQCDYKYVYSGNLKRHIMARHTGEKPFQCPHCDYKSVTSGHMNNHIRARHSGVKSYQCPHCDYKSVQIGNLNRHIMAHHTNEKPFQCPHCDYKSAGSGNMKIHIMAHHTGEKPFQCPHCDYKSVSSGNMKKHVMARHTGEKPYQCPYCDYKSVESGHLKNHMMGHHSGEKPHHCPQCDYKYVYSGNLKKHIIASHTSPSISSVAVVKEMTDKSESSFNDHIQLKQEELLIPDEARSFGAVVRCKEARLQIHKKEGVMSKSESLCKPSKTSFTKKILQWHGLLRSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00165406;
90% Identity: iTF_00165406;
80% Identity: iTF_00165406;