Acus066905.1
Basic Information
- Insect
- Arma custos
- Gene Symbol
- -
- Assembly
- GCA_037127475.1
- Location
- CM073764.1:103135328-103145186[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 2.1e-05 0.0046 19.3 1.3 1 23 158 180 158 180 0.97 2 27 3.5e-05 0.0076 18.7 0.8 1 23 193 215 193 215 0.97 3 27 0.00065 0.14 14.7 1.4 1 23 243 266 243 266 0.97 4 27 0.00013 0.029 16.8 0.5 2 23 273 295 272 295 0.96 5 27 1.4 3.1e+02 4.2 3.2 1 23 372 395 372 395 0.93 6 27 0.021 4.5 9.9 0.8 1 23 425 448 425 448 0.95 7 27 0.67 1.5e+02 5.2 0.2 3 23 456 477 455 477 0.94 8 27 0.42 91 5.8 0.2 2 14 532 546 531 555 0.79 9 27 0.01 2.2 10.9 0.1 2 23 564 586 564 586 0.95 10 27 0.0011 0.24 13.9 0.5 1 23 592 615 592 615 0.95 11 27 0.00079 0.17 14.4 2.6 1 23 623 645 623 645 0.97 12 27 0.0049 1.1 11.9 1.1 2 23 706 728 705 728 0.95 13 27 0.00064 0.14 14.7 2.4 2 23 735 756 734 757 0.95 14 27 0.091 20 7.9 4.1 1 20 775 794 775 796 0.92 15 27 8.2e-06 0.0018 20.6 2.3 1 23 815 838 815 838 0.98 16 27 0.057 12 8.5 4.2 1 23 841 864 841 864 0.95 17 27 0.38 83 5.9 0.6 2 23 871 894 870 894 0.92 18 27 3.8 8.2e+02 2.8 0.0 1 23 930 953 930 953 0.91 19 27 4e-05 0.0086 18.5 3.5 1 23 961 983 961 983 0.97 20 27 0.0013 0.29 13.7 0.1 2 23 989 1010 988 1010 0.95 21 27 0.017 3.7 10.2 0.4 3 23 1075 1096 1074 1096 0.95 22 27 0.088 19 8.0 0.3 2 23 1165 1187 1164 1187 0.94 23 27 7.1 1.5e+03 1.9 0.8 2 23 1228 1249 1227 1249 0.92 24 27 4 8.7e+02 2.7 6.4 1 23 1261 1284 1261 1284 0.96 25 27 0.0015 0.31 13.6 0.3 1 23 1322 1344 1322 1344 0.97 26 27 0.00012 0.025 17.0 1.2 1 23 1350 1373 1350 1373 0.94 27 27 0.064 14 8.4 0.7 1 20 1378 1397 1378 1399 0.93
Sequence Information
- Coding Sequence
- ATGAACAGTCCTACATTGAAAAATTACAAAGAACTCTGCAGACTTTGTGCTTCATATGATGTCATCAAGATACATATTTTCAGTGAACGTGGTGTAGAAAGAAACCTCAAAGATAAAATCACTACTTGCCTGCCATTTGATGTTTCTGAAGATGATTTGTTACCAAAGTCACTCTGTTATCgatgtatttataatttggaGAATTTTTATGACTTCCGCCGTGGATGCATTGATGCTAGAACCAGattagaaaatgtaataaaagaaGTGTTGAAACATGAATCAAAGGAAGAAGGTACTTTTGTTAAGATAGAGGATATTAAAGAAAGAGATGTGGATaATGAGCGTCTGGCAGAAGATGATCAGATTGAATCTGATGGTGAAGGAGATTGCCCGAATCCTGCTGACTTCCTTGAAGCATGCTTGGGCGAATCACCTCATCCTAAGCCAGGAGATGAAGAAGAAGGATCATATCCTTGTAGGATTTGTGATAGGCAATTCAATTCAAAAAGTTCCCTTACAATCCACTTGAAgttTCACCAAGACAGTCTTGGACCAGAAAATGATAAAGAAAGTTATGCTTGCTTCGTTTGTGATAAAGTATTCTCAAGTAAAGGTCATTTGGCACTTCACTCAAAAGTTCATATTGGAGAGACAAGTTCACCGGCAGTGTCCAATTCTAGCCGATCGAGTCCTCAGCACCTTCACAAACctaatattaaGCTTTATCGGTGTGATTTGTGCAATAAATCTTATTCAATGGCTAAACATTTATGGGGTCATGTTAGCACAACTCATAAAGGCCATCCTATGGTTACCTGTGGTTTATGTCAACGGACTTTTTCATCTGTTTCTAATCTTGAAGACCACAAACGTGTTAAACACAAGGATGAAAGTAATGTTGAGCTTataacTGATTCCTCTACTGTGTTTGAAGAATGTAACCCTGatgtgatagaaaaaaaacctgaagAGGTATCGTCAAACAGAAGAAAAAATTCTAAGCCAAGGAAAATTGAAAGAGAACTACCACTAAATGACTCTTATGTACCATCGGAGAATAAtgaaattccaatgaaaagtgaatttgaaaaaaactcTTCGGTGCCAGTTTACTCTTGCCTTTTATGCCAAGACAAATTCAGAGAAGCTGATCATTTGAGCCAACATCTTTCTGATTGTCATGGCTATGATGGACCTTTAGACTTCAGTACTTATCGTGATGAAACTGGTGAAGATTATGCTGAGAGTATGATGGAATTGGAAACAGTATTTTGTTGTGAGATCTGTATTAGAGAATTCAATGATAGAGGTAGCTTATGGTTGCACATGTTGTATTCCCATCGAGATGAAGCTTCTAAAGCTTGTGGTgtctgtttaaaaatatgtgatGACACTGAAAGTTTGACTCAACATGTAGAATCTGCCCATCCCAGAAGCAAAACTGACCAAAGGCGTTATAGTTGCCAAGTCTGTGCTAGGCAACACGATTCCCGTAAAAAGCTAGTTACTCATGCTAAAATTCATAACTTAGTTGATGCTGAAGAAAGGTGGCGTCATATGGCTTCAACACATGCAGGTGATCAAAGTGTAACATGTGAGGTTCCAGAATGTGGAAAGGTTTTTCCCACCAGTTCCATTAAAAAGGAGCATGCAGCTCATCATGCTGCTCAAGGCCAGTATCCAAATACATGCGAAGTTTGTGGAAAAATGTGGAAGACAAGGGTTGAATATTGGAAGCATATGATGGGCGTTCATCCTGACTGCTTACCTTTTATTTGTGGAGTTTGTCTGAAAGTGTTTTGTAACTTATCAAACTTGGTAGGCCACGTTCGGGAAAAACATTGGCCATTGCTAGGAGGAGATTTTTGTTGTGACATTTGTGGTAGACCATATTCTAAAGTTTCCAAAATGACTAGGCACAGAAAAGTTCATTATGTACCTGATAATCCGCCAGAACTTCAAGCTCTTCTCGAAAATCCTAAAGTCGAAAGTGAACCGCATTTCCTTCAGCAAACTTCTACATTGGCCTgtgatttatgtgagggcaatACTTTTGAATATGCCAACGTGGAGGAACTTGGCAAACACAGACAAGAAACACACAATGTAATGCCTTGTGATTTATGTACGAAATATTATGGAAGAACATCACATTTATGGAAACatgttaataaaattcataaaggtCATCCTGATGTTACATGTCCCACTTGCCAGCGTACATCTGCATCAAAATCCCATTTAGCTACTCATATTGCTAAACATCACCGTAGTGAAGACTTGGTTAGCTCTAAGGGCGAAAAGGAAAGTAATGGCGTACATACCTGTGAAAAATGTTCTAAAGTGTTTAGAAAAGAAACATTAGTAAGAAAGCATTTTAAACATTGTAAAGGCCCGAGACCAACACCAATCCCTCTTCCAGCACCAGTTGATGGAATGTACAAATGCGAAAGATGCGATAAATCTTTTAGTCTTAGTAATTTGCTATATAAACATATGAGGAGTTCGCATGTAACATTTACCTGTGAACTTTGCGAAACCAAGTGCAATACAAAAACAGAGTTGTATCAACATATTTGTGCTGAGCATGCTGACCACCCTGATGTCAAGTGTGGTGTCACTGGTTGTGACAAAATTTTAAGGTGTAAAGCAGACCTTGAGAAGCATCAGAAAGGACATCGTTTAAGTTTTCATCTGCATTACTGTATATTCTGTGCTGAATTAGTCACTAGTAAATATAAGATGAGAAGGCATTTAAAAGCTATTCACGCTaatgaaagtaaatatttatgtgCAATATGTCTGAAAGCACTACCTGGCTATCAGGAACTTCAAGCCCATGTCCAGGCAACACATCAAGCTGCATTACAGCGAGCGTTTGCTTGTCACGTCTGTGGTAAACCTTGTACAAACAAATCAAAACTAATGGAGCATATTAAGTACCATGGATCTAATTTCCTTCCTTGTAAAatctgtttaaaaatattttcatctaaaGAAGAACTTGATTCTCACATAGATAATCATCCTAGTGATAGTGGAGATGAAGAAGACCAGTTAGAAGAAGTGGAATTAGATACAAATAGTATAATGGATATTATCGGTGCtcctaaaaataatgtaaatgaaaagaTGGAGGAAAATGAAAGTGAAAAACGGAAAGCTAAGTCAGAAAGTGAAAATGCCAAACCAAAAAAGAAAACTAAGCTTGAAATACTTTGTACAATTTGTTCAGATATTTTTACTTCCAATTTAGATTTAAAGAAGCATATGAAAGATgcccataaaaataaaaagcctaATGATGCACCAGAGAATTCAGCTATTTGGGAAAGTGCTAATGATTCTaccaataatgaaaatgaaactgAATGGGAAAAGACTAATTCAGATAAGAGTTTCATGCACCAACTTGGGCTCATGCCTGAAGCAGAAAAGGCCAAACTAAAAACTGTTAGGAAGGTGTATACTGATGATTTTACACCCAGTGAATGTGAATTGTGTGGCAAAGTTTGGCCAGCAAAACGCCACCTTTGGCAACATATGGTCAGATTTCATAAGTCAGAGGCAGGTAGGACTTGTGGTGTCTGTTTGAAACTGTGTCCTGATTTTCCCTGTTTGAGTGCTCATTTGGTAATAGAACATCCTAATAATTTTGATGGTGATGCAACAAATGTGTCCTGTCGTGTTTGTGGTAAGTATCATAGTGCTAGATCAAAGTTATTAAGTCATGCTAGCATACATGTTGGACATGAAGAAAGAGCTACAGATGATGTACACCATTGTCTTATTTGTAAAGATACTTTTGTAGAATTCTCCCAATTTTGTGATCATATTAGAAAAGACCATAAGATTGATGAGGGTGAAGGTAAAAATTCTGTGAATGACCTCGAAACCTCTGCAGATAATGATGCCGAGTCaagttcagtaaatggtagtgaaaattcaaaattacctTTCCATTCATGTGAAGTatgttcattagtttttgccaGTGAAATCGGATTAACGAATCATAGGAGAATTCATGAACATTCTGACCACTTCAAGTGTGGGCAATGTGGCGAAGTTTTTGTATCTGCTGAAAATCTTTGTACCCACAAACTACAAAAACACAAAGGTACTGAGTTTGTTTGTGCAGACTGTAAATCAAATTTTTCTACTTATAATCAACTAACTGAACACAATAAGCAATGTAAAATGAAACTGAAAAATATGGGTGATACCAActctgatgatgatgatttaaTCCTGGACGATGATATAGAAGAATTAGAAACATCATATGGTGCTAATGACATTcatatgtcttctgaatctgATGTTGAAAAATCAGACCTTTTAGATGAAACCGATGATAAGTCAGAAGTATTAAATGAGTCAGAGGAATCTACAagcgaagaagaagaaaaatcaaacATGTCTGATACTTCATCACATAAAGAACCTAAAGCCGTTGAAGCATTCTTAGGCGGTACAAATGTTGAAGTAGTTCAAATTGATCTTTCTGACGATAACTCTAAttcaaaagcaaatgaaaaCTAA
- Protein Sequence
- MNSPTLKNYKELCRLCASYDVIKIHIFSERGVERNLKDKITTCLPFDVSEDDLLPKSLCYRCIYNLENFYDFRRGCIDARTRLENVIKEVLKHESKEEGTFVKIEDIKERDVDNERLAEDDQIESDGEGDCPNPADFLEACLGESPHPKPGDEEEGSYPCRICDRQFNSKSSLTIHLKFHQDSLGPENDKESYACFVCDKVFSSKGHLALHSKVHIGETSSPAVSNSSRSSPQHLHKPNIKLYRCDLCNKSYSMAKHLWGHVSTTHKGHPMVTCGLCQRTFSSVSNLEDHKRVKHKDESNVELITDSSTVFEECNPDVIEKKPEEVSSNRRKNSKPRKIERELPLNDSYVPSENNEIPMKSEFEKNSSVPVYSCLLCQDKFREADHLSQHLSDCHGYDGPLDFSTYRDETGEDYAESMMELETVFCCEICIREFNDRGSLWLHMLYSHRDEASKACGVCLKICDDTESLTQHVESAHPRSKTDQRRYSCQVCARQHDSRKKLVTHAKIHNLVDAEERWRHMASTHAGDQSVTCEVPECGKVFPTSSIKKEHAAHHAAQGQYPNTCEVCGKMWKTRVEYWKHMMGVHPDCLPFICGVCLKVFCNLSNLVGHVREKHWPLLGGDFCCDICGRPYSKVSKMTRHRKVHYVPDNPPELQALLENPKVESEPHFLQQTSTLACDLCEGNTFEYANVEELGKHRQETHNVMPCDLCTKYYGRTSHLWKHVNKIHKGHPDVTCPTCQRTSASKSHLATHIAKHHRSEDLVSSKGEKESNGVHTCEKCSKVFRKETLVRKHFKHCKGPRPTPIPLPAPVDGMYKCERCDKSFSLSNLLYKHMRSSHVTFTCELCETKCNTKTELYQHICAEHADHPDVKCGVTGCDKILRCKADLEKHQKGHRLSFHLHYCIFCAELVTSKYKMRRHLKAIHANESKYLCAICLKALPGYQELQAHVQATHQAALQRAFACHVCGKPCTNKSKLMEHIKYHGSNFLPCKICLKIFSSKEELDSHIDNHPSDSGDEEDQLEEVELDTNSIMDIIGAPKNNVNEKMEENESEKRKAKSESENAKPKKKTKLEILCTICSDIFTSNLDLKKHMKDAHKNKKPNDAPENSAIWESANDSTNNENETEWEKTNSDKSFMHQLGLMPEAEKAKLKTVRKVYTDDFTPSECELCGKVWPAKRHLWQHMVRFHKSEAGRTCGVCLKLCPDFPCLSAHLVIEHPNNFDGDATNVSCRVCGKYHSARSKLLSHASIHVGHEERATDDVHHCLICKDTFVEFSQFCDHIRKDHKIDEGEGKNSVNDLETSADNDAESSSVNGSENSKLPFHSCEVCSLVFASEIGLTNHRRIHEHSDHFKCGQCGEVFVSAENLCTHKLQKHKGTEFVCADCKSNFSTYNQLTEHNKQCKMKLKNMGDTNSDDDDLILDDDIEELETSYGANDIHMSSESDVEKSDLLDETDDKSEVLNESEESTSEEEEKSNMSDTSSHKEPKAVEAFLGGTNVEVVQIDLSDDNSNSKANEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764013; iTF_01298605;
- 90% Identity
- -
- 80% Identity
- -