Acus068459.1
Basic Information
- Insect
- Arma custos
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_037127475.1
- Location
- CM073764.1:124031768-124042480[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-67 8.6e-63 214.5 18.7 88 300 94 309 7 309 0.82 2 2 0.035 1.4e+03 0.4 5.7 120 172 307 359 306 383 0.76
Sequence Information
- Coding Sequence
- ATGAGTTCTAGTAACTCTGACAGTTCAGATGAAGGTACTAAAAGTGGTAGTGATGATGAAGATCCGTCCTCAACGGAAgaggaggaatcttcttcgcACAAAAGTGTTGCTTCAGACAGTCCCAAAGTTattgttaacaaaaataatgttgataCGGAGACAGCCGTCACTAACGGTTTTGTTAACGGTGTCATTGATGAAGATGGTGACAGTCAAGACGGTGATGAAGGGTTTCCTGACAACGATAACTCTCCACAAATGAACGGTCTAATTAATGAACTGATTGATAATTGTTCTCAGAGCGAACTGCGCGAGGCGGAGGATAAGTTTCGCAAGGCCATGATCGGCAATGCCCAGCTGGACAACGAGAAAACCGCCGCAGCATACCAAGTCGAACTGTACAAGGACAGGCTCGAAGAGCTGGGGGAGGAATATGCCCAACTCCagAGAGAACATAAAGAGAAATGCCGGCAGTACGAACAGATGAAGAGGGATTCAGAGAAACTCGCTAAAGACCTCCAGCTCGCGATGGCTGCCCTCGAAGAACGAGACAGGCTTATTCAAGAGCAAGGCCTAGTGATTGTAGGAGGTGACGGCTCGTCTTCCGACGCCTCTTCGGAAGATGAGGCCGACGACAAGCCCAACAAGAGAAGAGGGGAGAAGAGAGCTCTCGTCTCTGCCGAAGGGGCCGACCTTCTAGCTACTGTTTCTGGATCTCTCGATGTACGATTGAAGAAACTTTCTGCCGAAAGGAACGAACTATCTGATGAGCTCCGCCATGTTAAGCTTGAGTTGGAAGAGGAGAGGAATCGGGGGAGAGGTATAGGAGCAAATCCTGCCGACTTGGAAGATATACAGAGAGAAGCAAACAAGCAATTAGGTGATTTGAAATTCAAGTTGCAAAAAGCAGAACAGGATGTTTCTACATTGCAAGCAACgGTAGCGAGGCTAGAAGGGCAGGTAACTAGATATAAGACGGCTGCGGAAGCCGCGGAGAAAGTGGAAGATGAACTTAAGTTAGAGAGGAGAAAGCTACAACGAGAgTTGAGAGAATGCCAGGCGAGAGTCGAGGAACTGGAAACAGCGAATACACACCTTCAGCGAAGGTTAGACAAACTGAAGACTGCCAAGTCAGCGTTACTTAAAGACTTGTAG
- Protein Sequence
- MSSSNSDSSDEGTKSGSDDEDPSSTEEEESSSHKSVASDSPKVIVNKNNVDTETAVTNGFVNGVIDEDGDSQDGDEGFPDNDNSPQMNGLINELIDNCSQSELREAEDKFRKAMIGNAQLDNEKTAAAYQVELYKDRLEELGEEYAQLQREHKEKCRQYEQMKRDSEKLAKDLQLAMAALEERDRLIQEQGLVIVGGDGSSSDASSEDEADDKPNKRRGEKRALVSAEGADLLATVSGSLDVRLKKLSAERNELSDELRHVKLELEEERNRGRGIGANPADLEDIQREANKQLGDLKFKLQKAEQDVSTLQATVARLEGQVTRYKTAAEAAEKVEDELKLERRKLQRELRECQARVEELETANTHLQRRLDKLKTAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01298375;
- 90% Identity
- iTF_01298375;
- 80% Identity
- -