Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990262.1:8973797-8985712[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.002 0.14 13.1 9.4 1 23 197 219 197 219 0.97

2 13 2.1e-06 0.00015 22.4 0.2 3 23 233 253 232 253 0.98

3 13 5e-05 0.0036 18.1 1.3 2 23 262 283 262 283 0.98

4 13 0.00012 0.0086 16.9 1.9 1 23 289 311 289 311 0.98

5 13 9.7e-06 0.00068 20.4 0.5 1 23 317 339 317 339 0.98

6 13 1.2e-05 0.00085 20.1 8.3 2 23 346 367 345 367 0.97

7 13 1.9e-05 0.0014 19.4 2.0 1 23 373 395 373 395 0.97

8 13 5.5e-06 0.00039 21.1 1.8 1 23 401 423 401 423 0.98

9 13 0.002 0.14 13.1 1.8 1 23 429 451 429 451 0.98

10 13 0.0019 0.13 13.2 2.0 1 23 457 479 457 479 0.96

11 13 1e-05 0.0007 20.3 0.1 1 23 485 507 485 507 0.97

12 13 1.3e-06 9.2e-05 23.1 1.0 1 23 513 535 513 535 0.99

13 13 0.00056 0.039 14.8 3.1 1 23 587 609 587 609 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.002	0.14	13.1	9.4	1	23	197	219	197	219	0.97
2	13	2.1e-06	0.00015	22.4	0.2	3	23	233	253	232	253	0.98
3	13	5e-05	0.0036	18.1	1.3	2	23	262	283	262	283	0.98
4	13	0.00012	0.0086	16.9	1.9	1	23	289	311	289	311	0.98
5	13	9.7e-06	0.00068	20.4	0.5	1	23	317	339	317	339	0.98
6	13	1.2e-05	0.00085	20.1	8.3	2	23	346	367	345	367	0.97
7	13	1.9e-05	0.0014	19.4	2.0	1	23	373	395	373	395	0.97
8	13	5.5e-06	0.00039	21.1	1.8	1	23	401	423	401	423	0.98
9	13	0.002	0.14	13.1	1.8	1	23	429	451	429	451	0.98
10	13	0.0019	0.13	13.2	2.0	1	23	457	479	457	479	0.96
11	13	1e-05	0.0007	20.3	0.1	1	23	485	507	485	507	0.97
12	13	1.3e-06	9.2e-05	23.1	1.0	1	23	513	535	513	535	0.99
13	13	0.00056	0.039	14.8	3.1	1	23	587	609	587	609	0.99

Sequence Information

Coding Sequence: ATGGCCACTTTAAATAAGACACCGAAATATAACTTTGCAAAAATTTGTCGTGCATGTTTACAAATAAAGAAGGACATGCGGCCTTTATTCGAACAGCTTACTGCAACAATGTTGATGGACATTTCCAAAGTGCAGGTGGCAGTCGGTGATGGCCTCCCTCTGCAATTGTGCTTGCAATGTGTGCATCAAATCTCCAGATGCCATGCCTTCAAGGAGATGGTTGAGAAAAATGATGGTATATTGCACGAGCAAGCGAAATTAATTGCAGAAGAAACACTTAAAATTAATAACCAGATGGAAATGGATAAAGCACTGAGTTTGAATTGTGGTGACTCATCACAGTTTATAAAGTTCATTGAAGTCCCTCCACTAGGCAACAATCCAAACCAAATTCTTGATGGATTCTTTACTGACACACCAGAGCAGCCCGTCACACAGGAGGTACTTCCGAAAGATGAGTTCGATGTTGACAAGCTACCACAGCAACCACCTAAGAAGGAAAAAGAGGATGATGCATTGAACTCGGACGAGGAGAACTATTTGCAAATGGTTGTGTTCCAAGGGAACTCGGCAGTTGGCCCTGGGCAACATGTCTGTAATCTATGCCATAAGAAGTTCAAACATGCAAGATGGTTGAAACTCCACATGCATTCACACACCAACTGGATTAAAGCCAACTGCAAGAAACCACCTATGTGCCCTATTTGTGAAAGAACTTTTAAGGGTCCTGGTATGCTGAAAATGCACATGCGCACCCACGAGCAGCGCCCACCGAAGCCGCCAACGTGTTCCGTCTGCCAGAGAGTTTTCCCGTCCAAGACGCTGCTGTACAGGCACAGACAGACTCACTTCGAGCAGAAGACCCATCAGTGTACAGTCTGCGAGAAACGATTCTACAGCGGCTACGCTCTGCGCTCGCATATGGCGCGGCACAGAGGAGAAAGACCCTATGTCTGCGCTATTTGCTCTAAGAGTTTCTACAACCCAACTGATTTGAAGGTCCACTTCAGGCTGCACACTGGCGAGAAACCGCTCAAGTGTTCGGAGTGCAACAAGTCGTTCCGCCGCCACTCGACGCTCTGCCAGCACATGAAGAAGCACCGCGGCATACGGAACCACATCTGCCACGTGTGCAACAAGGCCTTCTACGAGGTGTCCAAGCTGAACGCGCATATGAGGGTGCACACAGGTGAGCGTCCATTCTCGTGTCAGTTCTGCGATCGCAAGTTCGCGCAGCAGTCGGCGCTGATCTACCACCGGCGCACGCACACCGGCGAGAAGCCCTACGCCTGCAAGCTGTGCGCCGCCCGCTTCACCACCTCCTCCGCACGCAACAACCACATGCACACGCATACTGGACACAAGAAGTTCGTGTGTCCAGTGTGCTTCAAGGGCTGCTCGTCGCGGACGGAGCTGCGCGTGCACTCGACCAAGCACACGGGCGAGAAACTGTTCGCGTGCGAGGTGTGCGGCCAGCGGTTCGGGTCGCCCTCCTACCTCGCCGTGCACCGCCGCTCCCACACCGGCGAGAAGAAGTATCAGTGCACTGTCTGCGGGAAAGGTTTCATTGAGTCGAACTCATACAAGAGGCACATAAAGACACACGAGGTAAAGGACGACCCGGACCCAGAGGCCCCCGCTGTGCAGCAAGCGATCAAGGAGGACGAGGAGAAACCTGCTATTGAAACCAAGGAGGAAAGCCAACTGGAGAATCAAATAGTCGTCCAGCCACAGGGAGAGAACGGCACTCAGAAGAAATACAAGTGCGGACTGTGTGTGAAGAGCTACATGTACTTACACAGCCTCAAGAAACACATGCTCAGTCACGTGCAGATGTGTGTTGTCGCGCCAGACGGCACCGAGAGACTGTACTTTAGGGGTAACCAACAGTATCCCGTCATCTCTTCAGTGCAGTCGGTGCAGCTGCAACAGACCCATCACGTCAATACGCAGCCGCAACATCTCCAGCTGCAGACCATACAGATACATCCTCAACATCAGCCCATACAGATACATACGGTGGGCGTGCAGCAGGTGCAGCAGGAGCAGCTGCACGTCGCAACCTCCAACTGTCAGTCAATGCTGCCCAACATATTGCAGCTCGGCGGCGGCGCAGTGGCGGTGTCCGGTCTGACTCAGGAGCTGGGCGGCGGAGTGGGGGGCGGCGTGCATCGCATCATCCTGCAGCAGCCCGCTACGCCCTCACACCCCGCGCTATACACTATACACCACTAG
Protein Sequence: MATLNKTPKYNFAKICRACLQIKKDMRPLFEQLTATMLMDISKVQVAVGDGLPLQLCLQCVHQISRCHAFKEMVEKNDGILHEQAKLIAEETLKINNQMEMDKALSLNCGDSSQFIKFIEVPPLGNNPNQILDGFFTDTPEQPVTQEVLPKDEFDVDKLPQQPPKKEKEDDALNSDEENYLQMVVFQGNSAVGPGQHVCNLCHKKFKHARWLKLHMHSHTNWIKANCKKPPMCPICERTFKGPGMLKMHMRTHEQRPPKPPTCSVCQRVFPSKTLLYRHRQTHFEQKTHQCTVCEKRFYSGYALRSHMARHRGERPYVCAICSKSFYNPTDLKVHFRLHTGEKPLKCSECNKSFRRHSTLCQHMKKHRGIRNHICHVCNKAFYEVSKLNAHMRVHTGERPFSCQFCDRKFAQQSALIYHRRTHTGEKPYACKLCAARFTTSSARNNHMHTHTGHKKFVCPVCFKGCSSRTELRVHSTKHTGEKLFACEVCGQRFGSPSYLAVHRRSHTGEKKYQCTVCGKGFIESNSYKRHIKTHEVKDDPDPEAPAVQQAIKEDEEKPAIETKEESQLENQIVVQPQGENGTQKKYKCGLCVKSYMYLHSLKKHMLSHVQMCVVAPDGTERLYFRGNQQYPVISSVQSVQLQQTHHVNTQPQHLQLQTIQIHPQHQPIQIHTVGVQQVQQEQLHVATSNCQSMLPNILQLGGGAVAVSGLTQELGGGVGGGVHRIILQQPATPSHPALYTIHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00744962;
90% Identity: iTF_00934047;
80% Identity: -