Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990278.1:7438477-7446071[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.9e-06 0.00056 20.6 4.7 1 23 199 221 199 221 0.98

2 17 8.5e-05 0.006 17.4 3.1 1 23 227 249 227 249 0.98

3 17 7.2e-05 0.0051 17.6 0.2 1 23 255 277 255 277 0.96

4 17 0.00015 0.011 16.6 0.8 1 23 282 304 282 304 0.98

5 17 2e-05 0.0014 19.4 0.8 1 23 310 332 310 332 0.99

6 17 0.00033 0.023 15.5 0.1 2 23 337 358 336 358 0.96

7 17 0.00015 0.01 16.6 3.7 1 23 364 386 364 386 0.98

8 17 1.6e-06 0.00011 22.8 2.2 1 23 392 414 392 414 0.97

9 17 1.6e-05 0.0011 19.7 0.7 1 23 420 442 420 442 0.99

10 17 0.0071 0.5 11.3 0.1 1 23 448 470 448 470 0.95

11 17 6.9e-06 0.00049 20.8 0.8 3 23 478 498 476 498 0.98

12 17 0.011 0.79 10.7 5.5 1 23 504 526 504 526 0.98

13 17 1.8e-05 0.0013 19.5 3.1 1 23 532 554 532 554 0.98

14 17 5.3e-06 0.00038 21.2 3.0 1 23 560 582 560 582 0.98

15 17 9.9e-06 0.0007 20.3 1.3 3 23 590 610 588 610 0.98

16 17 3.5e-06 0.00025 21.7 2.8 1 23 616 638 616 638 0.98

17 17 1.2e-05 0.00087 20.0 4.8 1 23 644 666 644 666 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.9e-06	0.00056	20.6	4.7	1	23	199	221	199	221	0.98
2	17	8.5e-05	0.006	17.4	3.1	1	23	227	249	227	249	0.98
3	17	7.2e-05	0.0051	17.6	0.2	1	23	255	277	255	277	0.96
4	17	0.00015	0.011	16.6	0.8	1	23	282	304	282	304	0.98
5	17	2e-05	0.0014	19.4	0.8	1	23	310	332	310	332	0.99
6	17	0.00033	0.023	15.5	0.1	2	23	337	358	336	358	0.96
7	17	0.00015	0.01	16.6	3.7	1	23	364	386	364	386	0.98
8	17	1.6e-06	0.00011	22.8	2.2	1	23	392	414	392	414	0.97
9	17	1.6e-05	0.0011	19.7	0.7	1	23	420	442	420	442	0.99
10	17	0.0071	0.5	11.3	0.1	1	23	448	470	448	470	0.95
11	17	6.9e-06	0.00049	20.8	0.8	3	23	478	498	476	498	0.98
12	17	0.011	0.79	10.7	5.5	1	23	504	526	504	526	0.98
13	17	1.8e-05	0.0013	19.5	3.1	1	23	532	554	532	554	0.98
14	17	5.3e-06	0.00038	21.2	3.0	1	23	560	582	560	582	0.98
15	17	9.9e-06	0.0007	20.3	1.3	3	23	590	610	588	610	0.98
16	17	3.5e-06	0.00025	21.7	2.8	1	23	616	638	616	638	0.98
17	17	1.2e-05	0.00087	20.0	4.8	1	23	644	666	644	666	0.98

Sequence Information

Coding Sequence: ATGTCCGAAGAACATCTAATAGAGTTAGTAAAATTGTATCCAGTATTATATGACAGAGAAAATGAGCAATACAGAGATTTTAATTTGCGAAATGACGCGTGGGAAGCGATAGCTGACCAAATGAAAACGTCGGTTGAAGATGTGAGAAGCAAGTGGGAAAAACTGAGAAATTGCTACACAAATGCCTTGAAAAGACGCAGAAAGAAAAGTATTCAAGGAGCTACTGAGCTTGTGTCTTGGAAGCACGAGAAACGCATGAAATTCCTGTTACCACACCTAAAATGGCGACATCCAATGTCTAGTTCCACCATAAAAAATGGTGAGGAGTCCTTTTATAGCGAAGACATTTCGGAAACCGAATTTCCACATCCATACATAGATAGTATTCCAAAGAGATCATCTTCATGCTCATCACCGCCACAAAATAAAGCTGATACTGATCTTACTGAACCAGAGTCTGTTGTACGATGGACGACCACAACTTTCAACATAACCTCCATTGAACCTGAGTTTGCCACCATGAAACAGGAGAAGTCTGGAGACACACTGGAACATGCTGAATCTATAGTTATAACTTTGACACCCATCGAGCGCTTCACATGTGATGTTTGCAACAAGAAGTTTTGTACGAAAAACTATTTGAAGACACACATACAGATACACAGCGGGGAACAACCTTATCGCTGTAATATGTGCAATAAGAAATTCCTTCAAAGAAGCAGCTTAAAGATCCACAGAAGAGAACACACGGGTGAGAAACCGTACGACTGTGAACTGTGCGATAAAAAGTTTGCCCGTGGCTACTCTTTGAGGGTGCATCAGATAGCACACGCAAAGAAGAAGTACACTTGTGATGTATGCAGTAAGAGGTTTAAGTTGGAAAAGACCTTAATCGCTCACAAAAGAGCCCATATAGGTGACAAACCGTTCACCTGTGGTGTATGCGAAAAGAGTTACTCCCAAAAATCTATATTAAAGGCGCATCTTAAAACGCACACAGTTGAAATACGATGCGATGCTTGCGATAAAGTATTCGCAAATACCAAAAGTCTAGAAGTCCACAACCGAATACACCTAGGTGACAAACCGTACTCCTGCACGCTTTGTGACATGAAATTCAGACATAATACCTCACTGAAAGTCCACACGATGAACCATACGGGTGAGAAACCACACTCCTGTGATGTGTGCCAGAAAAAATTCAGCCAAAAGTCCGCATTAAGCGAGCACATGCTAACACATACAGGCGAGAAACCGTACACTTGTGACATATGCGGGAACAGCTATAGCGGTCGAGGGTATCTGAAAAAACACAAGAGAATACACACGGGTGAAAGGCCATATACATGTGATATATGCTTTAAAAGTTTCACGGTCATCGGCATACTAAAAGAACATGTTGCCACACATAAAAATGAAAAGTTATTCGGTTGTAACGTTTGCGGTAAAAAGTTCTCTCAGAAGAAAAACGTGAGGGTACACGAGAGGATCCACAGCGGAGTTAAACCATATTCCTGTGATGTCTGCTGCCGTTCCTTCTCGCATAAGAATGGATTGCGCGCACACAAGACAACGCACAGCTCGGAGAAACCGTACACCTGTGATATATGCAGCAAACAGTTCAAACAGATAGGCAATTTGAAGCATCATTTTCGGATTCATACTGGAGAAAAACCGTTTGTATGTGAAATCTGTGATCGAAGATTCAGTCAGTTGAGTACGCTACACAAGCACAAACTAACGCACACAGATGAGAAACCGTTTGGATGTGAGCTCTGTGATAAACGGTTTAGTCGACGGGGTTCATTGGTGAAACATAACCGAACGCACACAGGTGAAAAGCCATACGTATGTGATATATGTCAACAGAGATTCTCACAGAATTCCTCGCTGCACACACACAGGAGAATTCATACTGGTGTGAAGCCCCACACATGTAATGTATGTTACAAGTCTTTTATTCAAACCAGCTCGCTCAATAGACATAGAAAGACGCATGGTGATCATTAG
Protein Sequence: MSEEHLIELVKLYPVLYDRENEQYRDFNLRNDAWEAIADQMKTSVEDVRSKWEKLRNCYTNALKRRRKKSIQGATELVSWKHEKRMKFLLPHLKWRHPMSSSTIKNGEESFYSEDISETEFPHPYIDSIPKRSSSCSSPPQNKADTDLTEPESVVRWTTTTFNITSIEPEFATMKQEKSGDTLEHAESIVITLTPIERFTCDVCNKKFCTKNYLKTHIQIHSGEQPYRCNMCNKKFLQRSSLKIHRREHTGEKPYDCELCDKKFARGYSLRVHQIAHAKKKYTCDVCSKRFKLEKTLIAHKRAHIGDKPFTCGVCEKSYSQKSILKAHLKTHTVEIRCDACDKVFANTKSLEVHNRIHLGDKPYSCTLCDMKFRHNTSLKVHTMNHTGEKPHSCDVCQKKFSQKSALSEHMLTHTGEKPYTCDICGNSYSGRGYLKKHKRIHTGERPYTCDICFKSFTVIGILKEHVATHKNEKLFGCNVCGKKFSQKKNVRVHERIHSGVKPYSCDVCCRSFSHKNGLRAHKTTHSSEKPYTCDICSKQFKQIGNLKHHFRIHTGEKPFVCEICDRRFSQLSTLHKHKLTHTDEKPFGCELCDKRFSRRGSLVKHNRTHTGEKPYVCDICQQRFSQNSSLHTHRRIHTGVKPHTCNVCYKSFIQTSSLNRHRKTHGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00404018;
90% Identity: -
80% Identity: -