Aage010882.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- -
- Assembly
- GCA_905147365.1
- Location
- LR990265.1:15871890-15874752[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-09 4.9e-07 29.8 0.0 3 42 16 55 14 58 0.87 2 2 6.1 2.2e+03 -1.1 0.1 25 40 824 839 823 840 0.88
Sequence Information
- Coding Sequence
- ATGCCGTATAAATATATTAAAAAAAAAGAACCAAAGTACACACAAAATGATATGGACAAAGCAATTCAAGACGTTAAAAATAATGGGCTGTCAATATACGCTTCAGCGAAAAAGTATGGAATCCCCACAACTACTCTTTATGACAGAATCAAAGACAATGTTATGTCAAATAATGTGGGTAGACCGACGGCTATTCCACCTGCGTTAGAAATGCAATTGGCAGATAAACTTAAAATTATGGAGAAATGGGGGTTTGGATTATCAAGACAAGAAGTGATAATGCTAGTAGAGGAATTTGTAGCAAAGAATAAATTGGACACCCCATTCAATAACAACAAACCAGGCAAAGATTGGTTTATTGCTTTTAGAAAAAGGAACAGATTGTCTATTAAAAAAGCGCAGCCCGTAGAATACGTGCGGAAAAAAATGACAGACCCTTTTGTTGTCTCGGAATATTTTAAGATGCTAGAGGAAACGTTGACTTCCTTAAATCTATTCGAAAGCTCACACTTGATATGGAATTTAGACGAGACTTCGTTATCACTTGATCCAGTCCGAACAAAAGTAGTTGGTGCTATTAACAAGCCATGTTCAAGGACCACTTGCGGGACTGGAAAAGAAAACATAACTGTATTGACGGCTGTGAGCGCCGCTGGCAAAAAGGTGTCGCCATTAATAGTATTTAAAGGTAAAAATATATGGGATGAGTGGATGGCACCAGCAGAAAACTACGATTTTGAACTGGCATATGCAGCTAGTACCAAAGGATGGATGGAATCAGAAATATTTTATAACTATATGAAAAAGATTTTAATTCCAGCTCTTGGTGAAGAACGTCCTGTGGTAATCATTTATGACGGACATTCCACACACGTGGATGTGAAAGTTGTCGAGTTGGCCATAGAAAACAATGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATATTTTCTCAAACCTTTGCAGAAACTTGGCAGGACGTAAACCCTGATGTGATTAAGAGTGGTTTTAAAAAAGCTGGCATTTGCCCATACGACCCTCAAGTGATACCAGTAGATAAATACGATCCAGCTGCGTACAGAAGATTTCAAAAAGCACAGTTAAGTCTCCAAATTCCGAAGACACTTAAAGAACTTTGTCTTGATGCTATAAATACAGAAAAAACGGCCAATCCCGATCAAGGAAGTACCAATTCTTGTGCAGAAAACCCATGTAGGGTTTTCTGCACAAGAATTGGTACTTTCAGTAATCTGAATAAACTGGCAAAAAATGACGATCAGGCTCAGTCATTTGTAGCATACCATACATTTGATAGGAAGAGAGAGAGATTTGATATACCAATGTGCCTTCAATGTGATAATTCTCAGCGCAAAGAAAAGAAGACTTCGCGTATAAAAATTATCGAGGATATAAAAGTAAATTTTGAAGAACTATTGCTAGAAAAAATTCGCCAGGATAAAAAAGGGAATACTTTAAATAAAAAAAAGCGAGTGGCTAAAGGGGCTGAGGTTATCACGTCTACAATGAAAAAAAATGCAGATGAAACACCACCGGTTAAATATGTATCAAAGAAGCGGGACTTGAAGAACAAAGGCAAGTTAAAGGCAAAACAAACTGATAAGATTACACTTGCAAAACCAGGTACTTCAGGAATAAAATATAAAGAAAAAGAATGCAAAAATAAATTAAAAAGAAGACGAAAAGTTTCAGACAGCTCTACTAGTGTGTCCGATATTATTAGTTTACACAGCGAAACCGATTTTGATTTTGTTGATAATTGTGACTATGAAGCATTAATTGACGGTTTCTGGGGTGATGAGTATTTGGATACAGAAATAGAAAAGGAAAACTCGCAAACAGAAGTAGGAGGTGAAAGTCCAAGTGAACATAAAATAATGTGTGATATTACAGGGAAAGAAAAAATATTAGGTGCTGAAGATTTAAAAACTAAAGAAGAAGGAAAAGAAAATAAAGGAAAAGAGAGAAAAATAAGACTGAAAATAAAAATGAATGTGTTAACAAGACTGACGATGACGAAGAAGCACCTAAAGAGAAAAAAAAAGAAACTGAAACAATATAAGACTGACAAACTTCCTGAAAATACTGATGAGAACCAAATAGAACAAAACAAGGCCGATGATGACGAAGAAGCACCTAAAGAGAAAACAATGAAATTGAAAGAATATAAGACTAACAAACTCCCTAAAAATACTGATGAGAATCTTATGGAACAAAACAAGACTGATGATGACGAAGAAGGAAATAAAGAAAAAAAAATGAAACTGAAACAATATAAGACTGACTCTGAAAATACTGATGATAACCAAATAGAACAAAACAAGACTGATGATGACGAAAAATATAGCTTAAATGATACAGTACTTGTAAGATACTTTAATAGAAAGAAATGGACTTACTACATTGGATTCATTGAGAATATGAAACAGAAAGACGACGAAACCTACTATACTATCAACTTTTTAAGAACAGTTAAGAAGCCAAGTCTTAAATTTGTACAAACGAAGAAACGAGATTATGATGAAATTACAGAATTACAAATTGTAAAAAAAGTAATATTAGAGAAAAGCTATGACAATGATAAAGAATTCATGTTGTTCAATGATGACAGCCAAATGTTTATAGACTAA
- Protein Sequence
- MPYKYIKKKEPKYTQNDMDKAIQDVKNNGLSIYASAKKYGIPTTTLYDRIKDNVMSNNVGRPTAIPPALEMQLADKLKIMEKWGFGLSRQEVIMLVEEFVAKNKLDTPFNNNKPGKDWFIAFRKRNRLSIKKAQPVEYVRKKMTDPFVVSEYFKMLEETLTSLNLFESSHLIWNLDETSLSLDPVRTKVVGAINKPCSRTTCGTGKENITVLTAVSAAGKKVSPLIVFKGKNIWDEWMAPAENYDFELAYAASTKGWMESEIFYNYMKKILIPALGEERPVVIIYDGHSTHVDVKVVELAIENNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIFSQTFAETWQDVNPDVIKSGFKKAGICPYDPQVIPVDKYDPAAYRRFQKAQLSLQIPKTLKELCLDAINTEKTANPDQGSTNSCAENPCRVFCTRIGTFSNLNKLAKNDDQAQSFVAYHTFDRKRERFDIPMCLQCDNSQRKEKKTSRIKIIEDIKVNFEELLLEKIRQDKKGNTLNKKKRVAKGAEVITSTMKKNADETPPVKYVSKKRDLKNKGKLKAKQTDKITLAKPGTSGIKYKEKECKNKLKRRRKVSDSSTSVSDIISLHSETDFDFVDNCDYEALIDGFWGDEYLDTEIEKENSQTEVGGESPSEHKIMCDITGKEKILGAEDLKTKEEGKENKGKERKIRLKIKMNVLTRLTMTKKHLKRKKKKLKQYKTDKLPENTDENQIEQNKADDDEEAPKEKTMKLKEYKTNKLPKNTDENLMEQNKTDDDEEGNKEKKMKLKQYKTDSENTDDNQIEQNKTDDDEKYSLNDTVLVRYFNRKKWTYYIGFIENMKQKDDETYYTINFLRTVKKPSLKFVQTKKRDYDEITELQIVKKVILEKSYDNDKEFMLFNDDSQMFID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164256; iTF_00164264;
- 90% Identity
- iTF_00164256; iTF_00164264;
- 80% Identity
- -