Aage010883.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- -
- Assembly
- GCA_905147365.1
- Location
- LR990265.1:15877384-15880245[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-09 5.1e-07 29.7 0.0 3 42 16 55 14 58 0.87 2 2 0.55 2e+02 2.2 0.1 25 40 858 873 857 876 0.90
Sequence Information
- Coding Sequence
- ATGCCGTATAAATATATTAAAAAAAAAGAACCAAAGTACACACAAAATGATATGGACAAAGCAATTCAAGACGTTAAAAATAATGGGCTGTCAATATACGCTTCAGCGAAAAAGTATGGAATCCCCACAACTACTCTTTATGACAGAATCAAAGACAATGTTATGTCAAATAATGTGGGTAGACCGACGGCTATTCCACCTGCGTTAGAAATGCAATTGGCAGATAAACTTAAAATTATGGAGAAATGGGGGTTTGGATTATCAAGACAAGAAGTGATAATGCTAGTAGAGGAATTTGTAGCAAAGAATAAATTGGACACCCCATTCAATAACAACAAACCAGGCAAAGATTGGTTTATTGCTTTTAGAAAAAGGAACAGATTGTCTATTAAAAAAGCGCAGCCCGTAGAATACGTGCGGAAAAAAATGACAGACCCTTTTGTTGTCTCGGAATATTTTAAGATGCTAGAGGAAACGTTGACTTCCTTAAATCTATTCGAAAGCTCACACTTGATATGGAATTTAGACGAGACTTCGTTATCACTTGATCCAGTCCGAACAAAAGTAGTTGGTGCTATTAACAAGCCATGTTCAAGGACCACTTGCGGGACTGGAAAAGAAAACATAACTGTATTGACGGCTGTGAGCGCCGCTGGCAAAAAGGTGTCGCCATTAATAGTATTTAAAGGTAAAAATATATGGGATGAGTGGATGGCACCAGCAGAAAACTACGATTTTGAACTGGCATATGCAGCTAGTACCAAAGGATGGATGGAATCAGAAATATTTTATAACTATATGAAAAAGATTTTAATTCCAGCTCTTGGTGAAGAACGTCCTGTGGTAATCATTTATGACGGACATTCCACACACGTGGATGTGAAAGTTGTCGAGTTGGCCATAGAAAACAATGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATATTTTCTCAAACCTTTGCAGAAACTTGGCAGGACGTAAACCCTGATGTGATTAAGAGTGGTTTTAAAAAAGCTGGCATTTGCCCATACGACCCTCAAGTGATACCAGTAGATAAATACGATCCAGCTGCGTACAGAAGATTTCAAAAAGCACAGTTAAGTCTCCAAATTCCGAAGACACTTAAAGAACTTCGTCTTGATGCTATAAATACAGAAAAAACGGCCAATCCCGATCAAGAAAGTACCAATTCTTGTGCAGAAAACCCATGTAGGGTTTTCTGCACAAGAATTGGTACTTTCAGTAATCTGAATAAACTGGCAAAAAATGACGATCAGGCTCAGTCATTTGTAGCATACCATACATTTGATAGGAAGAGAGAGAGATTTGATATACCAATGTGCCTTCAATGTGATAATTCTCAGCGCAAAGAAAAGAAGACTTCGCGTATAAAAATTATCGAGGATATAAAAGTAAATTTTGAAGAACTATTGCTAGAAAAAATTCGCCAGGATAAAAAAGGGAATACTTTAAATAAAAAAAAGCGAGTGGCTAAAGGGGCTGAGGTTATCACGTCTACAATGAAAAAAAATGCAGATGAAACACCACCGGTTAAATATGTATCAAAGAAGCGGGACTTGAAGAACAAAGGCAAGTTAAAGGCAAAACAAACTGATAAGATTACACTTGCAAAACCAGGTACTTCAGGAATAAAATATAAAGAAAAAGAATGCAAAAATAAATTAAAAAGAAGACGAAAAGTTTCAGACAGCTCTACTAGTGTGTCCGATATTATTAGTTTACACAGCGAAACCGATTTTGATTTTGTTGATAATTGTGACTATGAAGCATTAATTGACGGTTTCTGGGGTGATGAGTATTTGGATACAGAAATAGAAAAGGAAAACTCGCAAACAGAAGTAGGAGGTGAAAGTCCAAGTGAACATAAAATAATGTGTGATATTACAGGGAAAGAAAAAATATTAGGTGCTGAAGATTTAAAAACTAAAGAAGAAGGAAAAGAAAATAAAGGAAAAGGTAAAGGCAAAAAAACAAAGAATGGAAAGGAAAATTATCATTTAAATGGAGATTGTGATAATCAAGAAAATTATAAAGCTGCTAAAGTTCAAGAAAGCTGTAGAGAGAAAAATAAGACTGAAAATAAAAATGAATGTGTTAACAAGACTGACGATGACGAAGAAGCACCTAAAGAGAAAAAAAAGAAACTGAAACAATATAAGACTGACAAACTTCCTGAAAATACTGATGAGAACCAAATAGAACAAAACAAGGCCGATGATGACGAAGAAGCACCTAAAGAGAAAACAATGAAATTGAAAGAATATAAGACTAACAAACTCCCTAAAAATACTGATGAGAATCTTATGGAACAAAACAAGACTGATGATGACGAAGAAGGAAATAAAGAAAAAAAAATTAAACTGAAACAATATAAGACTGACTCTGAAAATACTGATGATAACCAAATAGAACAAAACAAGACTGATGATGACGAAAAATATAGCATAAATGATACAGTACTTGTAAGATACTTTAATAGAAAGAAATGGACTTACTACATTGGATTCATTGAGAATATGAAACAGAAAGACGACGAAACCTACTATACTATCAACTTTTTAAGAACAGTTAAGAAGCCAAGTCTTAAATTTGTACAAACGAAGAAACGAGATTATGATGAAATTACAGAATTACAAATTGTAAAAAAAGTAATATTAGAGAAAAGCTATGACAATGATAAAGAATTCATGTTGTTCAATGATGACAGCCAAATGTTTATAGACTAA
- Protein Sequence
- MPYKYIKKKEPKYTQNDMDKAIQDVKNNGLSIYASAKKYGIPTTTLYDRIKDNVMSNNVGRPTAIPPALEMQLADKLKIMEKWGFGLSRQEVIMLVEEFVAKNKLDTPFNNNKPGKDWFIAFRKRNRLSIKKAQPVEYVRKKMTDPFVVSEYFKMLEETLTSLNLFESSHLIWNLDETSLSLDPVRTKVVGAINKPCSRTTCGTGKENITVLTAVSAAGKKVSPLIVFKGKNIWDEWMAPAENYDFELAYAASTKGWMESEIFYNYMKKILIPALGEERPVVIIYDGHSTHVDVKVVELAIENNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIFSQTFAETWQDVNPDVIKSGFKKAGICPYDPQVIPVDKYDPAAYRRFQKAQLSLQIPKTLKELRLDAINTEKTANPDQESTNSCAENPCRVFCTRIGTFSNLNKLAKNDDQAQSFVAYHTFDRKRERFDIPMCLQCDNSQRKEKKTSRIKIIEDIKVNFEELLLEKIRQDKKGNTLNKKKRVAKGAEVITSTMKKNADETPPVKYVSKKRDLKNKGKLKAKQTDKITLAKPGTSGIKYKEKECKNKLKRRRKVSDSSTSVSDIISLHSETDFDFVDNCDYEALIDGFWGDEYLDTEIEKENSQTEVGGESPSEHKIMCDITGKEKILGAEDLKTKEEGKENKGKGKGKKTKNGKENYHLNGDCDNQENYKAAKVQESCREKNKTENKNECVNKTDDDEEAPKEKKKKLKQYKTDKLPENTDENQIEQNKADDDEEAPKEKTMKLKEYKTNKLPKNTDENLMEQNKTDDDEEGNKEKKIKLKQYKTDSENTDDNQIEQNKTDDDEKYSINDTVLVRYFNRKKWTYYIGFIENMKQKDDETYYTINFLRTVKKPSLKFVQTKKRDYDEITELQIVKKVILEKSYDNDKEFMLFNDDSQMFID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164263;
- 90% Identity
- iTF_00164263;
- 80% Identity
- -