Agoe021380.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- -
- Assembly
- GCA_949825045.1
- Location
- OX463809.1:33104821-33110421[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 9.2e-06 0.0024 21.0 0.4 1 23 201 223 201 223 0.98 2 28 0.00035 0.093 16.0 0.7 2 21 254 273 253 274 0.92 3 28 6.4e-05 0.017 18.3 1.1 2 23 302 324 301 324 0.96 4 28 0.0005 0.13 15.5 1.1 2 23 377 399 376 399 0.94 5 28 0.24 62 7.1 0.3 1 23 409 431 409 431 0.96 6 28 0.0023 0.6 13.4 1.9 2 23 470 491 469 491 0.95 7 28 0.0021 0.56 13.5 3.3 2 23 536 558 536 558 0.97 8 28 1.6 4.1e+02 4.5 0.0 1 23 608 631 608 631 0.95 9 28 0.028 7.3 10.0 0.3 1 23 693 715 693 715 0.97 10 28 0.011 3 11.2 2.7 2 23 727 748 726 748 0.95 11 28 0.084 22 8.5 1.3 2 23 760 781 759 781 0.96 12 28 0.024 6.3 10.2 0.3 1 23 791 813 791 813 0.98 13 28 0.0018 0.48 13.7 2.7 2 23 838 859 838 859 0.94 14 28 0.0048 1.2 12.4 6.4 1 23 870 892 870 892 0.97 15 28 0.00037 0.096 15.9 0.4 1 23 900 922 900 922 0.97 16 28 0.0013 0.35 14.2 0.1 2 23 942 964 941 964 0.97 17 28 1.6 4.2e+02 4.5 0.3 1 23 982 1004 982 1004 0.89 18 28 0.012 3.1 11.2 2.4 2 23 1045 1067 1044 1067 0.95 19 28 0.0022 0.56 13.5 1.0 2 23 1090 1111 1089 1111 0.95 20 28 1.2 3.3e+02 4.8 0.6 2 20 1115 1133 1114 1134 0.90 21 28 4.8 1.3e+03 3.0 5.7 2 23 1154 1176 1153 1176 0.95 22 28 0.015 4 10.8 1.4 1 23 1191 1213 1191 1213 0.95 23 28 0.4 1.1e+02 6.4 3.9 3 23 1221 1241 1219 1241 0.96 24 28 0.028 7.4 10.0 1.2 2 23 1252 1274 1251 1274 0.95 25 28 3.3 8.7e+02 3.5 2.9 2 23 1291 1309 1291 1309 0.85 26 28 0.93 2.4e+02 5.2 1.3 2 20 1313 1331 1313 1333 0.92 27 28 0.00096 0.25 14.6 0.5 2 23 1413 1435 1412 1435 0.96 28 28 0.15 40 7.7 5.1 1 21 1472 1492 1472 1493 0.94
Sequence Information
- Coding Sequence
- ATGGCACTCAAACTTGGAAAATGCCGACTCTGCCTCAAGCTTGGAGACTTCTACTCCATATTCACTGTGGACAATTCCGTGCAACTTGCGGAGATGGTCATGGAATGTTCCAAAGTAAAAGTTTATGATGGTGATGGCTTACCTGACAAAGTATGCTCGGAATGTATACAAAAACTTAGCAGCGCCtatattttcaaacaacaatGCGAGAGGTCTGATCAGGAACTGCGGAGGAACTATGTACCACCACCAGgcTTTAGCATCAGTCCTACTCCAAATCGACAAAGCAGTGACTCTGCATTTTCCAGccacactgaattttctaatcaggccaaaccatcatcatctaGTGAGAAGAAAGTTACTCCTGCAACCCGCAACCGTAAGAGAAGTCGAGAGAGTGACAATGTCTCTGTCGCCAGCCACTCAAGAGAGAGCTCTTATATGTCCAATATTCCGAAACACACTGACTCATCTATCaagaaaactgagaaaagaccACGACTGGAATCGGAATCTGATTTTGAAGACACAAGTATTTCCCATTTCTCTGCAGACCCTGGCAGTGACTCTGATGTTCCAATCCTGAGTGCCAACAAATTTCCCTGTGACATATGTGGTAAATCATACAGTAACTCAAAAAGCCTGGGTCAACACAAACGCATACACACCAGGATAAACAAGAGTCTTGGTGAAAATGCTGTTGTTGATACACCAACAAGCCATTTGCAGGACGCCACCGACGATGACGATAAGCTGACATGTGATAAGTGTGGGAagactttcaaattgaaaatcatGCTAAAACGTCACTATGATACTTGTGTTAAACCTTCCCCAACAAAAACACCGAAGAAGGAACTTGTTGTGACTCTAGAACCAATTTCTCCAGAGAAGAGAATCCCCTGTAGCATGTGCCCAACAATGTTCAAGAACACGGAAAACTTGGAGAAGCACTTGAGGGTATGTCATGCTGCTGTACTCAAGAAAACAGATTACAAAGCCGAGCCGCCAAAGTTTGACAAAGTCCCAGTACCGTGCATATTCTGTCACAAACCATTTGAAGACTATTATGTGCATGCTGTCCATGTGAACAGATGCACTGAAGTAGTGGAACTACCATCCTGGGAATGCCCCGTCTGCCAGAAAGTGTGTTCCAAGAAGGTGAATTACTTTAAACACATTAAGGATGCACATTTTGAGCCACGTTCGGATCAGAAGTTCTTTGAGTGCAGAATGTGTTCTAAGAAAATGCAGTCGCAAGAATTACTGATCAAGCATCTAGCTGCTCACGTATCAAATATTGAAGACACGGGATCCATTGAAGAAGAGGAAAGAGGCAGCACAGCTGACGACTCAATTTCAATCAACTCCGAGTACAGCGGCAGCAACAGCAACGGGCCCTTAAAGTGCAAATACTGCAGCAAAGGCTTCACCTACAAGAAATCCCTCGACAGTCACGAGGCCAAACATGAGAGCGGCGAAATAGAAACCAAGGCGGAACCGCCGGAGACGCTAAACCAGAATCTGAGTACCAGTGGCAGAGAACGCAGGAGCATCTACAAAGATACAGAATCAGAGGACAGCGGAGATGACGGAGACAACACCTGTGACCTGTGTGAGAAAATATTCTCCTACAAAAGAGCACTGCTGCACCACAAGAGGACCAAACACAACATGAGCTCTGGGCACAAGCGCGCCAACATCAACCTGAAAGACTGCCAGGTCACCTGCCTCATCTGTGACTTGCAGATGAAGGTCTCCGAGCACAAGCAGCACAACCAACAACACATTGACAACAACATCAAACCTCGAAACAAGTACACCTGCATTGAATGCGGTGAAATCTCCAAGAGTCTCCAAGCGCTAGGCACGCACATCAAACTCGTGCATCGATTAAAAAAGGCGGTGACGAAGAAGTTTGTTGTTCCCGACCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAAACGGAACCTCTGGATGAGATCCAGAGTCACAACGGCTTTGGAGAGGTTCCGGCGGTTCCGGCAGCGGAGGGCgacgcgacggcggcggcgttAGCTAGTGTCAGTGGGTTCACCTGCCCGATATGTAGCAAGAAGATGGCCACCATGCTCTCGCTGAAGAGACACGTCAATTGGCACACTAACGTCGGTGATAAAATGGAACAGACCCTGGAGTGCTTTGTCTGTAGCGAGAAATTCCGCTTCAAAGGTCACTACAGGACTCACATGAGCGGGCACATGAAGGACCCCAACCTGGACCCCAAGTTCCTCGTGTGCACCATCTGCAACCGGCGCAGTAAACACCTCCGTGCGGCGCAAGCGCACATGAACTTCCACAAGCAGACACGCTTCCAGAGTAACGACTACCAGTGCGCCATCTGCAAGCGAGTCTTCCAGGTCCGTAAGGTATATCTCTCCCACATGGCAGTCCACTACAAACGCGGCGAGAGTATCACTAACACTGTTTTTTACGGCGCCACGGATAAGACGGGAGACGGGGCAAACTCCTGCCCTCACTGTGGCAAGGTATGCGACTCCGAGGTGTCCCTGAAGCACCACATCGTCTGGCACAAGTCCAAGACTTCTCTGTACGCGTCGCGCCATGACTGCCACATGTGCACCCAGCAGTTCACCAACAAGCGCCGGCTGCAGCTGCACATCCGCACGCACTACGAGGACGTGAATGGACCTTTCAAGTGTACCGTCTGTGGCGTCGGGTACACAGATGAGGATTACTTCCGCCGGCACGTCAAGGGACACAACTTCGACAACCAGTCGCATAAGAAACGCATCGCGAAGTTGAGGGAAAACAAGGTGAAGTGTCCCATCTGCGAACGGTACTACCCGGACCTGCCCAAGCTCATCCGACATCTCCGGCGCACGCACCCGCAGAGCAAGATGATCAAGCACGACCCTGACGCGCCCCCGGAGAAGGTCTACTCGTGCAAGCTCTGCGCCAAGGTCTTCCTCAACGAGAAGCGCCTGCAGATGCACGAGGAGGCCCATCTCAGGAAGCCGCTGCACTACAAGTGCAAGTTCTGCGGCAGAAAGAGCGGCTCTATCAAGATCCACAACCTTCACATCAAGCAGCGACACTTGACGCGGAAGTATTTCGACAATCCGCTCAAATGTACGCAATGCGAGGAGAGGTTCGTGCGGGGGTACGAACTGCACCACCACCTGAGGGACGCGCACGGCATCGAGGAGACATGGATCGCGGATCGCAACCAGGAAGCCCTCGAGGGACCGCTGAAGGAACTTCAATGCTCTCTCTGTCACAAGGTGCTCGCCAGCAAGGGCAACTACGAACGACACCTCGACTACCACAACACCCTCCGCTGCAACTACTGCTTTGAGTACTTCAACACTCAGAAGTTCCTCGATGGACACCAAGTCTTCGCCTGTGAAAAACGAAAGCTGATAGGCAATACTGAACCGCACTCCCGCAAAATCAAGTGCCATATCTGTTACAAGGCATTCCATGTTCAAGTTAAACTGGATTGCCACTTGCGCACGCAGCACGATATCGCGGTCTCCAAGGAAGCCAGCGAAGCCAAGCAAGAGTTCGTGTGCGACTTCTGCTTCCGTGTCTTCGAGAACGAGGACTCTCTCATGTCTCACAAGTTCTACCACCGCACTATCGGCTACTTCGGATGCCTCTACTGCGACAGAAAGTTCAACACCGAGACGGTATACAGGAAACACAAGAACCACCATTTCGCACAGCTGAACGTCGATAACCCGACGAAGTGCGAGCACTGTGACCAAACTTTCGTGGCTTTCCGGGAAATGATATACCACATGAGAGACGAACATGGCGATGATAAGGACTGGATCGTCCTGCCCAAAGAATCGATTGAAGAGGAGTGCCACATCTGCAAGAAAATATTCTTCAATGTACAACGACATCTGCAGCTGCACGAGGAGAATCGATGCAAAAAGTGCGGAGAGTACTTCTTCTCCAGAATTGACTACGACAATCATCTGTGCGCTATCGAGACTGACGACGAACCGGAAGACAACGAGCTCGACCTCAGGCCCAAGTACGAAGAGTGCGGGTTCTGCTTCAAGCCAATAACCAAAGCCAACTCCAAACTAAAACACGACCTCATACACAAGAACTCCGGATCAATCTCCTGCCGCTTCTGCATGCTCAAGTTCAAAACCATCGACGCGTTTAATATCCACGCGTTCACGCACCGCAACAGGAAATACAACAAGCAACCGATCAAGTGCCGCCAATGCGGAGAAAAGTTCGTCAAGTACGGACTCTTCATAAAACACATGCAAAGCGTTCACAAGTCCAAAAACAAGATGCACTACCGAGCCGTGATCAAGCCGGAACGGTGCGTTATATGCGGCGATGAGTTCCCGAACTTACACAACCATTATCGAGCCCATTTGCAACACCGTTGCCAGCGATGCGGCAAATATTTCACCTCGAACAAAGTGTTTACGCAGCACCAGTGCGACAAGGAAGACTCTGATCCTAGCAAAGTGTTCGTTTCCGACGAGAATCTGATTCATCTGATTAACACCTATGTTCCTAAAGATGACACTGATAACGAAAGGTATTATGGAATGGATGACGAGGAAGAAGAGGAAGTGGTTGTCGACGAATCAAGAGCTAGAGGGATTAAAGGAATCAGTGACGTGCTGCGTACATACGAACGAAAACGTAAAAGTGAGGCAGGCGAGTTGGCTAACGTAGAAACCGGATCAGGAAATGGTACACTCACCCAAGACGAAGATAGTCAACAATCAATGGAGATGGAACATCTGGTGCCATTATCGATACAATCTCCGATTATATCTGATGTGCTATCATTATACCAAGAGAAGAAAGCTCAGGAAGAAATTATTGACTTGAGCGACGAAGAAGTGGATGTTAATGCCACTGGCCATACAGTAGTTACTATTGACGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNSVQLAEMVMECSKVKVYDGDGLPDKVCSECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPTPNRQSSDSAFSSHTEFSNQAKPSSSSEKKVTPATRNRKRSRESDNVSVASHSRESSYMSNIPKHTDSSIKKTEKRPRLESESDFEDTSISHFSADPGSDSDVPILSANKFPCDICGKSYSNSKSLGQHKRIHTRINKSLGENAVVDTPTSHLQDATDDDDKLTCDKCGKTFKLKIMLKRHYDTCVKPSPTKTPKKELVVTLEPISPEKRIPCSMCPTMFKNTENLEKHLRVCHAAVLKKTDYKAEPPKFDKVPVPCIFCHKPFEDYYVHAVHVNRCTEVVELPSWECPVCQKVCSKKVNYFKHIKDAHFEPRSDQKFFECRMCSKKMQSQELLIKHLAAHVSNIEDTGSIEEEERGSTADDSISINSEYSGSNSNGPLKCKYCSKGFTYKKSLDSHEAKHESGEIETKAEPPETLNQNLSTSGRERRSIYKDTESEDSGDDGDNTCDLCEKIFSYKRALLHHKRTKHNMSSGHKRANINLKDCQVTCLICDLQMKVSEHKQHNQQHIDNNIKPRNKYTCIECGEISKSLQALGTHIKLVHRLKKAVTKKFVVPDLADFCEVVVTKTEPLDEIQSHNGFGEVPAVPAAEGDATAAALASVSGFTCPICSKKMATMLSLKRHVNWHTNVGDKMEQTLECFVCSEKFRFKGHYRTHMSGHMKDPNLDPKFLVCTICNRRSKHLRAAQAHMNFHKQTRFQSNDYQCAICKRVFQVRKVYLSHMAVHYKRGESITNTVFYGATDKTGDGANSCPHCGKVCDSEVSLKHHIVWHKSKTSLYASRHDCHMCTQQFTNKRRLQLHIRTHYEDVNGPFKCTVCGVGYTDEDYFRRHVKGHNFDNQSHKKRIAKLRENKVKCPICERYYPDLPKLIRHLRRTHPQSKMIKHDPDAPPEKVYSCKLCAKVFLNEKRLQMHEEAHLRKPLHYKCKFCGRKSGSIKIHNLHIKQRHLTRKYFDNPLKCTQCEERFVRGYELHHHLRDAHGIEETWIADRNQEALEGPLKELQCSLCHKVLASKGNYERHLDYHNTLRCNYCFEYFNTQKFLDGHQVFACEKRKLIGNTEPHSRKIKCHICYKAFHVQVKLDCHLRTQHDIAVSKEASEAKQEFVCDFCFRVFENEDSLMSHKFYHRTIGYFGCLYCDRKFNTETVYRKHKNHHFAQLNVDNPTKCEHCDQTFVAFREMIYHMRDEHGDDKDWIVLPKESIEEECHICKKIFFNVQRHLQLHEENRCKKCGEYFFSRIDYDNHLCAIETDDEPEDNELDLRPKYEECGFCFKPITKANSKLKHDLIHKNSGSISCRFCMLKFKTIDAFNIHAFTHRNRKYNKQPIKCRQCGEKFVKYGLFIKHMQSVHKSKNKMHYRAVIKPERCVICGDEFPNLHNHYRAHLQHRCQRCGKYFTSNKVFTQHQCDKEDSDPSKVFVSDENLIHLINTYVPKDDTDNERYYGMDDEEEEEVVVDESRARGIKGISDVLRTYERKRKSEAGELANVETGSGNGTLTQDEDSQQSMEMEHLVPLSIQSPIISDVLSLYQEKKAQEEIIDLSDEEVDVNATGHTVVTIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00161773;
- 90% Identity
- iTF_00161773;
- 80% Identity
- -