Aalb010747.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- -
- Assembly
- GCA_963457715.1
- Location
- OY735262.1:2262598-2268941[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 8.7e-06 0.0005 20.9 0.9 1 23 201 223 201 223 0.98 2 30 0.00032 0.018 16.0 0.7 2 21 254 273 253 274 0.92 3 30 0.00016 0.0093 16.9 2.5 2 23 302 324 301 324 0.96 4 30 0.00082 0.048 14.7 2.3 2 23 380 402 379 402 0.94 5 30 0.21 12 7.1 0.3 1 23 412 434 412 434 0.96 6 30 0.00018 0.01 16.8 1.4 2 23 473 494 472 494 0.95 7 30 0.0019 0.11 13.5 3.3 2 23 539 561 539 561 0.97 8 30 0.56 33 5.7 0.0 1 23 611 634 611 634 0.96 9 30 0.078 4.5 8.4 0.4 1 23 692 714 692 714 0.97 10 30 0.003 0.17 12.9 2.2 2 23 726 747 725 747 0.96 11 30 0.075 4.4 8.5 1.3 2 23 759 780 758 780 0.96 12 30 0.021 1.2 10.3 0.4 1 23 790 812 790 812 0.98 13 30 0.0012 0.071 14.1 2.4 3 23 837 857 836 857 0.96 14 30 0.0093 0.54 11.4 5.3 1 23 868 890 868 890 0.96 15 30 0.00033 0.019 15.9 0.4 1 23 898 920 898 920 0.97 16 30 0.013 0.73 10.9 0.8 2 23 940 962 939 962 0.96 17 30 3.2 1.8e+02 3.4 1.8 1 23 980 1002 980 1002 0.94 18 30 9.3 5.4e+02 1.9 2.3 1 21 1009 1029 1009 1032 0.72 19 30 0.01 0.6 11.2 2.4 2 23 1043 1065 1042 1065 0.95 20 30 0.0031 0.18 12.9 0.8 2 23 1088 1109 1087 1109 0.95 21 30 0.23 13 7.0 0.6 2 20 1113 1131 1112 1132 0.94 22 30 7.7 4.5e+02 2.2 4.2 2 23 1152 1174 1151 1174 0.86 23 30 0.021 1.2 10.3 1.1 1 23 1189 1211 1189 1211 0.95 24 30 0.034 2 9.6 1.3 3 23 1219 1239 1217 1239 0.96 25 30 0.026 1.5 10.0 1.2 2 23 1250 1272 1249 1272 0.95 26 30 1.3 74 4.6 3.6 2 23 1289 1307 1289 1307 0.86 27 30 0.83 48 5.2 1.3 2 20 1311 1329 1311 1331 0.92 28 30 0.36 21 6.4 0.8 2 23 1379 1400 1378 1400 0.95 29 30 0.0021 0.12 13.4 0.3 2 23 1411 1433 1410 1433 0.95 30 30 0.26 15 6.8 5.1 1 20 1470 1489 1470 1491 0.93
Sequence Information
- Coding Sequence
- ATGGCACTCAAACTTGGAAAATGCCGACTCTGCCTCAAGCTTGGGGACTTTTACTCTATATTCACTGTGGACAATTCCGTGCAGCTTGCGGAGATGGTCATGGAATGTTCCAATGTAAAAgTTTATGATGGTGATGGCTTACCTGACAAAGTATGCTCGGAATGTATACAAAAACTCAGCAGCGCCTATATTTTCAAACAACAATGCGAGAGGTCTGATCAAGAATTGCGGAGGAACTATGTCCCACCACCAGgCTTTAGTGTCAGCCCCACTCCAAATAGACAAAGCAGTGACTCTGCATTTTCCAGCCATACTGACTTTTCTAATCAGACCAAACCCTTGTCATCCAATGAGAAGAAAGTCACACCAGCAATCCGCAACCGTAAGAGAAGTCGAGAGAGTGATGTTATCTCTGTCGCCAGTCACTCGCGAGAAAGCTCCTACAGGTCCAACATCCCGAAATACACTGATTCATCTAACAAAAAAGCTGAGAAAAGACCACGACTGGAATCTGAATCAGATTTTGAAGACACCAGTATATCCCATTTCTCTGCAGACGCTGGCAGTGACTCTGACGTTCCAATTCTGAGTGCCAACAAGTTTCCTTGTGACATGTGTGGTAAATCTTTCAATAGCTTGAAAAGCCTCAGTCAACACAAACGCATACACACAAAGACAAGCAAGAATCTCGGTGAAAATGCTGTTGTTGACATACCAAAAAGTAATTCGCAGGACGCCACCGACGACGATGATAAGCTGACATGTGACAAGTGTGGGAAGACTTTCAAATTGAAAATCATGCTAAAACGTCACTATGATACTTGTGTTAAACCTTCCCCAACGAAAACACCGCAGAAGGAACTGATTGTGACTCTAGAACCAATTACACCAGAGAAGAGAATGTCCTGTAGCATGTGCACAACAATGTTCAAGAACATTGAGAACTTAGAAAAGCACATGAGAGTATGTCATGCTGCTGTACTCAAGAAAGTAGATCAGAAAGTAGATCACAAAGTCGAGACAAGGGTGGAAAAAGTCCCAGTACCTTGCATATTCTGTCACAAACCATTCGAAGACTACTATGTGCATGCTGTTCATTTGAACAGATGTCCTAAACAAGTGGAACTACCATCCTGGGAATGCCCTGTCTGCCAGAAAGTGTGTTCCAAAAAGAACAATTACTTCAAACACATTAAGGATACACATTTTGAGCCACGCTCAGATCAGAAGTTCTTTGAGTGCAGAATGTGTTCTAAGAAAATGCAGTCACAAGAATTACTGATCAAACATCTGGCTGCTCACGTATCAAATATCGAAGACACGGGATCTATTGAAGAAGAAGACAGaGCCAGCACAGCTGATGACTCAATATCAATCAACTCAGGGAACAGCGGCAGCACAATGAACGGGCCCTTAAAATGCAAATACTGTGGCAAAGGCTTCACCTATAAGAAGTCCCTCGACAGTCACGAGGCCAAACACGAGAGCGGCGAGATAGAAACCAAGCACGAACCGCCGGAGCCGCCAGACCAGAATCTGAGTACCAGCGGTAGAGAACGCAGGAGCATCTACAAAGATACAGAATCAGAGGACAGCGGAGACGACGGCGACAACACATGTGACCTGTGTGagaaaatattctcatacaaaaGAGCACTGCTGCACCACAAGCGCACCAAACACAACATGAGCTCCGGACACAAGCGCGCCAACATCAACCTTAAAGACTGCCAGGTCACCTGCCTCATATGCGACCTGCAGATGAAGGTCTCGGAACACAAGCAGCACAACCAACAACACATCGACAACAACATCAAACCTCGGAACAAGTACACCTGCATTGAATGCGGTGAAATCTCGAAGAGCCTCCAAGCTCTCGGTACGCACATCAAAATGGTGCATCGCCTGAAAAAGGCGGTGACGAAGAAATTATTCGTTCCCAACATGGCGGATTTTTGTGAGGTCGTTGTGACGAAGACGGAACCCCTGGATGAGATCCAGAGTCACAACGGCTTTGGCGAGGTTCCAGCGGCGGCGGGGAGCGAGGCGGCGGCGTTGGCTAGTGTCAGCGGGTTCACCTGCCCGATCTGCAGCAAGAAGATGGGCACCATGCTCTCGCTGAAGAGACACGTCAATTGGCACACCAACGTCGGGGACAAAATGGAACAGACCCTCGAGTGCTTCGTCTGTAAAGAGATATTCCGCTTCAAAGGTCACTACAGGACTCACATGAGCGTGCACATGAAGGATCCCAACCTGGACCCCAAGTTCCTCGTGTGCACGATCTGCAACCGACGCAGCAAGCACCTCCGCGCTGCGCAGGCGCACATGAACTTCCACAAGCAGACGCGCTTCCAGAGCAACGACTACAAGTGCGCCATCTGCAAGCGAGTCTTCCAGGTCCGCAAGGTATATCTCTCCCACATGGCAGTCCACTACAAGCGCGGCGAGAGCATCAGCAACACCGTCTACGGCGCCACGGACCAGACGGGCGAAGGCGCCAACGCCTGCCCCCATTGCGGAAAGGTATGCGACTCCGAGATGTCTCTAAAACACCACATCATCTGGCACAAGTCTAAGACTTCACTGTATGCTTCGCGCCATGACTGCCACATGTGCGCCCAACAGTTCACCAACAAGCGTCGGCTGCAGCTGCACATCCGCACGCACTATGAGGACGAGAACGGCCCCTTCAAGTGCACCGTGTGCGGCGTCGGATACACCGACGAAGACTACTTCCGCCGCCACGTCAAAGGACACAACTTCGACAACCAGTCGCACAAGAAACGCATCGCCAAACTGCGGGAGAACAAGGTGAAGTGCCCCATCTGCGAGCGGTACTACCAGGACCTGCCCAAGCTGATCCGGCACCTGCGCCACACGCACCCGCAGAGCAAGATGATCAAGACCGACCCCGACGCGCCGCCCGAGCCGGTCCACTCATGCAAGCTCTGTGCCAAGGTGTTCCTCAACGAGAAGCGGCTGCAGATGCACGAGGAACGGCACCTCCGCAAGCCGCAGCATTACAAGTGCAAGTTTTGCGGCCGAAAGAGCGGCTCCATCAAGCTGCACAACCTGCACATCAAGCAGCGACATCTCACGCGCAAGTACCTGGACAACCCGCTCAAGTGCACCCAGTGCGAGGAGCGGTTCGTGCGCGGATACGAGCTGCACCACCACTTGAGGGACGCGCACGGAATAGAGGAGACCTGGCTCGCGGACCGCGACCAGGAAGCGCTCGAGGGACCGCTCAAGGAGCTGCAGTGCTCGCTCTGTCACAAGGTGCTCGCCAGTAAGGGGAACTATGCGCGACACCTCGACTACCACAACACCCTGCGCTGCAACTACTGCTTCGAGTACTTCAACACTCAGAAATTCCTCGAAGGACACCAAGTCTTCGCCTGCGAAAAACGAAAGCTCATCGGCGACACTGAACCGCACGTGCGCAAAATTAAGTGCCATATCTGTTACAAGGCGTTCCATGTTCAAGTGAAACTGGATTGCCACTTGCGCGCGCAGCACGATATAAAGGTCTGCAGGGAAGCCAGCGCGGCCAAGCAGGAGTTTGTTTGCGACTTCTGCTTCCGTGTGTTCGAGAACGAGGACTCCCTAGTGTCTCACAAGTTCTACCACCGCACCGTGAGCTACTTTGGGTGCCTCTACTGTGACAGGAAGTTCAGCACCGAGACGGTATACAGAAAACACAAGAACGCCCATTTCTCACAGCTGAACGTCGACAATCCAACCAAGTGCGAACACTGTGACCAGACTTTCGTGGCTTTCCGGGAGATGATATACCACATGAGGGACGACCACGGCGACGATAAAGACTGGATCGTCCTGCCCAAAGAGTCGATCGAAGAGGAGTGCCACATCTGCAAGAAAACGTTCTTCAACGTGCAACGACATCTGCAGCTGCACGAGGACAATCGATGCAAGAAGTGCGGAGAGTACTTCTTCTCCAGAATCGACTACGACAACCATCTGTGCGCCATCGAGACCGACGACGAGCCGGAAGACAACGAGCTCGACCTCAGGCCCAAGTACGAAGAGTGCGCGTTTTGCTTCAAGCCGATCACCAAAGCTAACTCCAAACTGAAGCACGACCTCATACACAAGAACTCGGGCTCCATCTCCTGCCGCTTCTGCACGCTCAAGTTCAAGACCATCGACGCGTTCAACATCCACGCGTTCACGCATCGCAACAGCAAATACAACAAGCGCCCCATCAAGTGCCGCCAATGCGGGGAGAAGTTCGTCAAGTACGGGCTCTTCATAAAACACATGCAGGGCATTCACAAGTCCAAGAACAAGATGCACTACAGAGCGGTCGTCAAGCCGGAACGGTGCGTCATATGCGGCGATGATTTCCCGAACTTACACAACCACTATCGAGCCCACTTGCAACACCGATGCCAGCAATGCGGCAAATATTTCACCTCGAACAAAGTGTACACGCAACACAAGTGCGACAAGGAAGACTCTGACCCGAGCAAAGTGTTCGTTTCCGACGAGAACCTGATTCATCTTATCAACACCTACGTTCCTAAAGATGGCACTGATAACGAAAAGTATTATGGAATGGACGAGGACGAAGAAGAGGAAGTGGTCGACGAATCAAGAGCAAGAGGGATTAAAGGAATCAGTGACGGGTTGCGTACCTACGAACGAAAACGGAAGAGTGTATCAGGTGATTTGGCTAAAGTAGAAACCGGATCTGGAAATGGTACATTAAGCCAAGACGACGACAGCCAACAATCTATGGAAATGGAACATCTGGTGCCATTATCGATACAATCGCCGATTATATCTGATGTGCTATCATTATACCAAGAGAAGAAGGCTCAAGAAAATAATCCTAATGAAGGAGTAATTATTGACTTGAGTGACGACGAAGTGGACGTTAATGCCACTAGCTATGAAATAGTTACTATTGACGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNSVQLAEMVMECSNVKVYDGDGLPDKVCSECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSVSPTPNRQSSDSAFSSHTDFSNQTKPLSSNEKKVTPAIRNRKRSRESDVISVASHSRESSYRSNIPKYTDSSNKKAEKRPRLESESDFEDTSISHFSADAGSDSDVPILSANKFPCDMCGKSFNSLKSLSQHKRIHTKTSKNLGENAVVDIPKSNSQDATDDDDKLTCDKCGKTFKLKIMLKRHYDTCVKPSPTKTPQKELIVTLEPITPEKRMSCSMCTTMFKNIENLEKHMRVCHAAVLKKVDQKVDHKVETRVEKVPVPCIFCHKPFEDYYVHAVHLNRCPKQVELPSWECPVCQKVCSKKNNYFKHIKDTHFEPRSDQKFFECRMCSKKMQSQELLIKHLAAHVSNIEDTGSIEEEDRASTADDSISINSGNSGSTMNGPLKCKYCGKGFTYKKSLDSHEAKHESGEIETKHEPPEPPDQNLSTSGRERRSIYKDTESEDSGDDGDNTCDLCEKIFSYKRALLHHKRTKHNMSSGHKRANINLKDCQVTCLICDLQMKVSEHKQHNQQHIDNNIKPRNKYTCIECGEISKSLQALGTHIKMVHRLKKAVTKKLFVPNMADFCEVVVTKTEPLDEIQSHNGFGEVPAAAGSEAAALASVSGFTCPICSKKMGTMLSLKRHVNWHTNVGDKMEQTLECFVCKEIFRFKGHYRTHMSVHMKDPNLDPKFLVCTICNRRSKHLRAAQAHMNFHKQTRFQSNDYKCAICKRVFQVRKVYLSHMAVHYKRGESISNTVYGATDQTGEGANACPHCGKVCDSEMSLKHHIIWHKSKTSLYASRHDCHMCAQQFTNKRRLQLHIRTHYEDENGPFKCTVCGVGYTDEDYFRRHVKGHNFDNQSHKKRIAKLRENKVKCPICERYYQDLPKLIRHLRHTHPQSKMIKTDPDAPPEPVHSCKLCAKVFLNEKRLQMHEERHLRKPQHYKCKFCGRKSGSIKLHNLHIKQRHLTRKYLDNPLKCTQCEERFVRGYELHHHLRDAHGIEETWLADRDQEALEGPLKELQCSLCHKVLASKGNYARHLDYHNTLRCNYCFEYFNTQKFLEGHQVFACEKRKLIGDTEPHVRKIKCHICYKAFHVQVKLDCHLRAQHDIKVCREASAAKQEFVCDFCFRVFENEDSLVSHKFYHRTVSYFGCLYCDRKFSTETVYRKHKNAHFSQLNVDNPTKCEHCDQTFVAFREMIYHMRDDHGDDKDWIVLPKESIEEECHICKKTFFNVQRHLQLHEDNRCKKCGEYFFSRIDYDNHLCAIETDDEPEDNELDLRPKYEECAFCFKPITKANSKLKHDLIHKNSGSISCRFCTLKFKTIDAFNIHAFTHRNSKYNKRPIKCRQCGEKFVKYGLFIKHMQGIHKSKNKMHYRAVVKPERCVICGDDFPNLHNHYRAHLQHRCQQCGKYFTSNKVYTQHKCDKEDSDPSKVFVSDENLIHLINTYVPKDGTDNEKYYGMDEDEEEEVVDESRARGIKGISDGLRTYERKRKSVSGDLAKVETGSGNGTLSQDDDSQQSMEMEHLVPLSIQSPIISDVLSLYQEKKAQENNPNEGVIIDLSDDEVDVNATSYEIVTIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00163521;
- 90% Identity
- iTF_00163521;
- 80% Identity
- -