Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463829.1:7009635-7023273[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0033 0.87 12.9 2.5 1 23 142 164 142 164 0.98

2 12 5.3e-05 0.014 18.6 3.5 1 23 168 191 168 191 0.93

3 12 0.00045 0.12 15.6 4.6 1 23 228 250 228 250 0.99

4 12 0.00029 0.075 16.3 1.8 1 23 259 281 259 281 0.98

5 12 1e-06 0.00027 23.9 2.4 1 23 287 309 287 309 0.99

6 12 8.1e-06 0.0021 21.1 2.0 2 23 316 337 316 337 0.97

7 12 6.5e-08 1.7e-05 27.7 0.9 1 23 343 365 343 365 0.96

8 12 5.2e-05 0.014 18.6 0.7 1 23 371 393 371 393 0.97

9 12 0.00047 0.12 15.6 4.2 1 23 399 421 399 421 0.96

10 12 9.8e-07 0.00026 24.0 4.3 1 23 427 449 427 449 0.98

11 12 3.8e-06 0.001 22.2 0.5 1 23 455 477 455 477 0.98

12 12 0.00065 0.17 15.1 1.8 1 23 483 505 483 505 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0033	0.87	12.9	2.5	1	23	142	164	142	164	0.98
2	12	5.3e-05	0.014	18.6	3.5	1	23	168	191	168	191	0.93
3	12	0.00045	0.12	15.6	4.6	1	23	228	250	228	250	0.99
4	12	0.00029	0.075	16.3	1.8	1	23	259	281	259	281	0.98
5	12	1e-06	0.00027	23.9	2.4	1	23	287	309	287	309	0.99
6	12	8.1e-06	0.0021	21.1	2.0	2	23	316	337	316	337	0.97
7	12	6.5e-08	1.7e-05	27.7	0.9	1	23	343	365	343	365	0.96
8	12	5.2e-05	0.014	18.6	0.7	1	23	371	393	371	393	0.97
9	12	0.00047	0.12	15.6	4.2	1	23	399	421	399	421	0.96
10	12	9.8e-07	0.00026	24.0	4.3	1	23	427	449	427	449	0.98
11	12	3.8e-06	0.001	22.2	0.5	1	23	455	477	455	477	0.98
12	12	0.00065	0.17	15.1	1.8	1	23	483	505	483	505	0.95

Sequence Information

Coding Sequence: ATGTTTGATGCAGCTAATACGTGCCGGACTTGTATGAAAAATAGCACCAATTTGCTTGGTCTCTTCGAGCCATGGAGTTTAGATGACAATAATCCCGTTCTGATAGCGGAGGCACTGGCTGAGTGCACCTCTACACAGATTGCTCATCTGGATGGCCTGCCACAAAGTCTTTGCAAAGAATGTTTGACAATTTTAGAAATAGCTTACACATTCCGTAAGCAAACTCTCAAATCAGACTCGGAGCTCCGGAAACTCTTTCTGTTGCAAGCAAGTGTAAAGGATGAGACGCACGAAATAAAAGAGGAAGTCATTGACAACTTTGATGACTATCTTGATGAACTTGAGATATTAAAAGATGAGGACTGCAAAGTTGATTACAAAGTCGAGGAACAAACAAACATTGACAATAGATCTGATAAGCTGTATGAGTGCTACAAATGCCAAAAACAATACACCAGTGAGGAGAAATTCGTAAAACATTTGTCCTCTCATGAAAAACAATTCCAGTGTACAGAATGTAGCAAAACATTTAGAAAACCATCTTCACTGTACCGACATAATACAAAATACCATGACTGTGTAGAAAACAAGGAAGCATATAAAACGGAACCAGATAcagaaatagaaatagattTGGCATCACATATcccaaaagaaaaaaacaattcaaaagAAAACCACTACCAATGTACAAAATGCGAACTACAATTCTCTAAACACAGATCTTTAGCGAGTCACATGAAGAAACATACTAACAGTCAGAAGAAGAAGCTATTTCAATGCGACATCTGTAAAGCTGTGTTTGGATTTAAGAATCTACTTCATAGACATTTGAGGCTACACTCAAATCATAGGCCTTATGAGTGTACACAGTGTGAAAAGAGATACTCCAGAAATGATCAGTTGAAGGAACATATGAAGAAACATGACGGTATCAAGCCGAATGTCTGCCCTTTTTGTAACAAAGCCTTCAGCCAACTGTGCAACCTTAAGGATCACGTCCGGACCCACACCGGCGAGACGCCCTACCTGTGTTCGGAGTGCGGCAAGGGCTTCAACAACAGCTCCAACCTGCGACAACACATGATGAGACACACCGGGGTCAAACCCTTCGCCTGCCCTATGTGCCCTATGACCTTCTGTACTAAAGGTCAAATGAACGGGCACATGGACACCCACACTGGGGCCCACCCCCACAAGTGCGCCCAGTGTGGCCACACCTTCACCAAGCCGCAGTCGCTGAAGAAGCACTCGCTCATACACCTCGGAGTCAAGCCGCATCAGTGCGACGTCTGTCCTATGAGGTTCTCCTCCAAGGACCACTTGAAGCGTCACCAGCGCATCCACACCGGCGAGAAGCCGTACGCGTGCTCCTACTGCGCGCGCGCGTTCACGCAGAGCAACGACCTCGTCAAGCACCTGCGCACGCACGTCGGACAGAACGTCTACCAATGTTCTATATGCGACATGCGTTTCCGCATCCTGACGGAGCTCAAAAAGCACTACACCTTCCACTACGCTGCCAACCACAGCCAACCCGACAACCACAGCCAACCCGACAACCACAATCAACCCGACAACCACAGTCAACCACCCGACAACGAAACTAGACCACCTGACAACTACATACTACCCGACTGTCACGATGAATTACCCAACAACCAGAACCGAAACCCATCAGGCAACATTATACAGGTTGTCAGTAATACAGAAAAGAGGAACATAATGATACCCGTTCATTCGGGTACCAGTACCCGAAGTAATGATGACCATACAATAACTATAACATACAACCCGAACGAGGTAGATAAAACAACGGGTATAACAGGCACAATAATGATTGATATGACTCCGGGAAAGAATAAAGGGTGA
Protein Sequence: MFDAANTCRTCMKNSTNLLGLFEPWSLDDNNPVLIAEALAECTSTQIAHLDGLPQSLCKECLTILEIAYTFRKQTLKSDSELRKLFLLQASVKDETHEIKEEVIDNFDDYLDELEILKDEDCKVDYKVEEQTNIDNRSDKLYECYKCQKQYTSEEKFVKHLSSHEKQFQCTECSKTFRKPSSLYRHNTKYHDCVENKEAYKTEPDTEIEIDLASHIPKEKNNSKENHYQCTKCELQFSKHRSLASHMKKHTNSQKKKLFQCDICKAVFGFKNLLHRHLRLHSNHRPYECTQCEKRYSRNDQLKEHMKKHDGIKPNVCPFCNKAFSQLCNLKDHVRTHTGETPYLCSECGKGFNNSSNLRQHMMRHTGVKPFACPMCPMTFCTKGQMNGHMDTHTGAHPHKCAQCGHTFTKPQSLKKHSLIHLGVKPHQCDVCPMRFSSKDHLKRHQRIHTGEKPYACSYCARAFTQSNDLVKHLRTHVGQNVYQCSICDMRFRILTELKKHYTFHYAANHSQPDNHSQPDNHNQPDNHSQPPDNETRPPDNYILPDCHDELPNNQNRNPSGNIIQVVSNTEKRNIMIPVHSGTSTRSNDDHTITITYNPNEVDKTTGITGTIMIDMTPGKNKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00161765;
90% Identity: -
80% Identity: -