Basic Information

Insect: Argyresthia albistria
Gene Symbol: -
Assembly: GCA_963457715.1
Location: OY735269.1:9517569-9523464[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0019 0.11 13.5 3.4 1 23 142 164 142 164 0.98

2 12 5.9e-05 0.0034 18.3 2.8 1 23 168 191 168 191 0.94

3 12 0.00024 0.014 16.3 5.0 1 23 226 248 226 248 0.99

4 12 4.5e-05 0.0026 18.6 0.6 1 23 257 279 257 279 0.98

5 12 1.6e-05 0.00095 20.0 5.2 1 23 285 307 285 307 0.98

6 12 6.9e-06 0.0004 21.2 2.0 2 23 314 335 314 335 0.97

7 12 7.3e-08 4.2e-06 27.4 1.0 1 23 341 363 341 363 0.95

8 12 8e-05 0.0046 17.9 0.8 1 23 369 391 369 391 0.97

9 12 0.00013 0.0077 17.2 1.5 1 23 397 419 397 419 0.96

10 12 1.7e-06 9.9e-05 23.1 3.0 1 23 425 447 425 447 0.98

11 12 3.3e-05 0.0019 19.1 0.7 1 23 453 475 453 475 0.98

12 12 0.00037 0.022 15.7 2.2 1 23 481 503 481 503 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0019	0.11	13.5	3.4	1	23	142	164	142	164	0.98
2	12	5.9e-05	0.0034	18.3	2.8	1	23	168	191	168	191	0.94
3	12	0.00024	0.014	16.3	5.0	1	23	226	248	226	248	0.99
4	12	4.5e-05	0.0026	18.6	0.6	1	23	257	279	257	279	0.98
5	12	1.6e-05	0.00095	20.0	5.2	1	23	285	307	285	307	0.98
6	12	6.9e-06	0.0004	21.2	2.0	2	23	314	335	314	335	0.97
7	12	7.3e-08	4.2e-06	27.4	1.0	1	23	341	363	341	363	0.95
8	12	8e-05	0.0046	17.9	0.8	1	23	369	391	369	391	0.97
9	12	0.00013	0.0077	17.2	1.5	1	23	397	419	397	419	0.96
10	12	1.7e-06	9.9e-05	23.1	3.0	1	23	425	447	425	447	0.98
11	12	3.3e-05	0.0019	19.1	0.7	1	23	453	475	453	475	0.98
12	12	0.00037	0.022	15.7	2.2	1	23	481	503	481	503	0.98

Sequence Information

Coding Sequence: ATGTTTGATGCAGCTAATACATGCCGGACCTGTATGAAAAATAGCACCACTTTGCTTGATCTCTTCGAGCCATGGAGTTTAGATGAAAATAATCCAGTTCTGCTGGCAGAGGCACTGGCTGAGTGTACCTCTACACAGATTGCTCATCAGGATGGCCTGCCACAAAATCTCTGCAGAGAATGTGTCACAATTTTAGAAATAGCTTACACATTCCGTAAGCAGACTCTCAAATCAGACTCAGAGCTTCGGAAACTTTTTCTATTGCAAGCAACTGTAAAGGATGAGATACGTGACGTTAAAGAGGAAGTCATTGACAACTTTGATGACTATCTGGATGATCTTGAGATATTCAAAGAGGAGGACTGCAAAGATGATTACAAAGTCAAAGAACATACAAACATTGACAATACATCTGATAAGCTGTATGAGTGTTACAAATGCCAAAAACGATACACCAATGAGAAGAAATTCATAAAACACGTGTCTTCTCATGAAAAACAGTTCCAGTGTACAGGATGTAGCAAAACATTCAGAAAACCAACCTCACTGTTCCGACATAATATAAAATACCACGACTGTGTACAAAACaaggaaaaatataaaacagaACCAGACACAGACATAGATTTGGGATCACATGtcacaaaagaaaaaaacaacTCTAAAGAAAACCAATACCAATGTACAAAATGTGAACTAAAATTCTCTAAACACAGATCTTTAGCGAGTCACATGAAGAAACATACTAACAATCACAAAAAGAAGCAATTTCAATGTGACATCTGCAAAGCTGTGTTTGGGTATAAGAATCTTCTTCAGAGGCATTTGAAGCTGCACTCAAATCTAAGACCTTTTCACTGTACACAGTGTGAAAAGAGATATTCAAGGAATGATCAGTTAAAGGAACATATGAAAAAACATGATGGTATCAAGCCAAATGTCTGCCCTTTTTGTAACAAagCGTTCAGCCAACTGTGCAACCTCAAAGACCACGTCCGGACCCACACTGGTGAGACTCCCTTCCTATGCTCGGAGTGCGGGAAGGGCTTCAACAACAGCTCCAACCTGCGCCAGCACATGATGCGGCACACGGGGGTCAAGCCCTTCGCCTGCCCGAAGTGCCCCATGACCTTCTGTACTAAAGGTCAAATGAACGGGCACATAGACACCCACACTGGGGCCCACCCCCACAAGTGCGCCCAGTGTGGGGCCACCTTCACGAAACCGCAGTCGCTGAAGAAGCACTCGCTCATACACCTCGGGGTTAAACCGCATGAGTGCGATGTTTGTCCTATGAGGTTCGTATCCAAGGACCACCTGAAGCGCCACCAGCGCATCCACACCGGCGAGAAGCCCTACGCGTGCTCGTTCTGCGCGCGCGCATTCACGCAGAGCAACGACCTCGTCAAGCATCTGCGGAAGCATGTTGGACAGAATGTTTACCAATGCTCTGTATGCGACATGCGTTTCCGCATCCTGACAGAACTCAAAAAGCACCACTCCGTCCACTATGCCGCCAACAAAAATCAATCCGACAACCACAACAAACCCGACAACCAAAGCCAACCAGCCGACAACGAAACCCAACCACCAGACTACATACTACCCGAAAGACCCGATGAACTACCCGACAACCAGAACCGAGATCTACCAGACAATATACAGGTTGTAAGTGACCCTGACACAGAAAAGTGTGACATGATGATACCCATACATTCGGGTAGTAATAATAACCATACAATTACGATTACATATAACCCCAACTCGATATTGATCGGCATGACTCCGGAAAAGGAGGAGTGA
Protein Sequence: MFDAANTCRTCMKNSTTLLDLFEPWSLDENNPVLLAEALAECTSTQIAHQDGLPQNLCRECVTILEIAYTFRKQTLKSDSELRKLFLLQATVKDEIRDVKEEVIDNFDDYLDDLEIFKEEDCKDDYKVKEHTNIDNTSDKLYECYKCQKRYTNEKKFIKHVSSHEKQFQCTGCSKTFRKPTSLFRHNIKYHDCVQNKEKYKTEPDTDIDLGSHVTKEKNNSKENQYQCTKCELKFSKHRSLASHMKKHTNNHKKKQFQCDICKAVFGYKNLLQRHLKLHSNLRPFHCTQCEKRYSRNDQLKEHMKKHDGIKPNVCPFCNKAFSQLCNLKDHVRTHTGETPFLCSECGKGFNNSSNLRQHMMRHTGVKPFACPKCPMTFCTKGQMNGHIDTHTGAHPHKCAQCGATFTKPQSLKKHSLIHLGVKPHECDVCPMRFVSKDHLKRHQRIHTGEKPYACSFCARAFTQSNDLVKHLRKHVGQNVYQCSVCDMRFRILTELKKHHSVHYAANKNQSDNHNKPDNQSQPADNETQPPDYILPERPDELPDNQNRDLPDNIQVVSDPDTEKCDMMIPIHSGSNNNHTITITYNPNSILIGMTPEKEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00163507;
90% Identity: -
80% Identity: -