Agoe021799.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- MBD-R2_1
- Assembly
- GCA_949825045.1
- Location
- OX463809.1:36966374-36998390[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1e-08 0.001 21.4 0.1 5 34 814 843 810 849 0.89 2 3 0.37 1.2e+04 -1.3 0.0 37 54 1014 1031 1012 1047 0.82 3 3 2.3e-11 7.7e-07 31.4 0.0 6 55 1107 1156 1102 1184 0.87
Sequence Information
- Coding Sequence
- ATGGCGATTAAAAACTGTTGTATTGAGGACTGTTTCTCATGCTCGACAAAAGAAGAAGATGTGGGTGTGACATACCATAAGTTTCCAAAAGACACGACACTTCGAGATATCTGGACTAAAATAACACAGTTTATTGATAAGGATGTAAAATTGCCTTATGTTTGCTCGCGGCATTTCTGTAAAAGTGATTTTCAATCATTAAAGGATTCTAAATATGTGTTAAAGTCAGATGCTGTGCCATCAATTTTTCCCTGGACAATAAGGGACATTTCTGACATAAATATGGAGtcaaatgaaaaagaaaaagatgcttcaaaagaaaataatactgAACCAATGCAAGCAGAAGcaaataaaccaaaaacagtgCAACCGGATGAACCAAAACTTGATGATGTTGAGAATGCTTCAGTTGGCCTTGACACCAGCAAAGAATCTGAAGGAGAAGGCATTGAAGCCATCAGAAAGTTTATTGAGGAACAGGAAAAAGAAATACAAGAGTTACAAGCAGAAGTAAAACCACTCACACCTAGAATTGTTTCCGAAACTTATAGTAAGAAAGATGAAGAAATTAAAACTGAAAAACAGGATTCAAAAGATGAAGCAAAAGGCAGTGAAGTTGCAATCAGTGATAATAATGTCTTGGATGATTTAAGCAATGATGCTATAATCGAAGATGATAAAAGCGATAATGTAAAGAGTAAAGAAGATAGAAGTGATGATACTGAGCGTCATGaatatgtcaaaattacaaTAGAGGACAAAAGCAATGATAATAAAACCAGAGGTGGTACAAGCAATGCCAAAAAAACACAAATGAAAGACAAGAAACCTAAAAAAGATCTTGTACTAGAAGAGCAACATGATGAAAATATGTCTATGACAGTAGCCTCAGATGTGATGAACATAATACTAAGTGAATCAGAAGCTAAATTGGCTAAGCCAACAGATGGTGTAAAGACACCCAAACAGAATTTATTGTCTGGAGAAAAAGGCAGCAGTTCGATGGCGTTGTCTGTCGGCTCCAAGATCGAGGCGAAAGACTACGGAGAACACTGGCACTCGGCTAACATTGCTGAGGTGGATTATGACGAAATGGAAGTGCTTGTGCGATATGAGAATCTTTCTAAAAAACACGACGAATGGATAAGTGTAAGCAGCCCGCGGCTGCGTCCGCAGGGCAGCCCAGCCAAGGCACAAGCCGAGCTTAATCCAGAGCCAGTCGTCAAAGAAGATCCGAGGGAGGAGAAACCAAAGATGCCGTACAAAGTTGGAGACAGGTGCTTGGCGAGGTGGCGGGACAATAGGCGGTTCCAGGCCACTGTGCTTGCTGATTTCGGGGATGGCAACTACGAAGTCGTATTCGACGACGGCTTCGTCTGGCGCTGCCCGGTCGTGCGGCTCTCCAAGATGAGGGTCGGAGACAGAAAGTCTTCCCTCTCTATCCCTCTCCGGGTGAACACCGCCCTGCCCCCCGCCCCTTCCCCGCTCCCCACCCCTCCCGGGTCCACCGCCGAGCCCCCCTATCACACACACCTCTTTGACCCCGCCCGCGACTTCTTAGGTTCGAAAAGCGACCGCCGCGAGAGAAAGAGAAAGCTGAACATAAAAGAGATATTCAACATTGggcagaagaagaagaaagatgAATCCGCTTCGGCGAAGAAGGTTAAGACGGAGCCCGCGGAAAAGAAACCGAAAGTGGTTAAACAGAAAGCCGAAAGCGCGAAGGGGATACACATCAAGACTGAAGTGAAACCGGTGCTGCCTGATGCCGTGGCATGTATTATCGGCTCAGTAGCTGAGGATGTACCGATAAAGACTGAAATAAAAGAAGTGGTGATTAAACAGGAAGAACCTCAGGAGGCAACTGATGTTGAGGAAGACAAGATGCAAGTGGATGAGGTGGTCATGATCGATCCTTCACTTCCTGTTGATACTGagGTTCAAGAAGAAGAACCTAAAGATGACACTAATGCTGACTCAATCACTATAAAAAATGATGAAGAAATGCTCAAGATACTTGAAGCCTACAACAAAATAGAAGACAAATTTAGCAAACCCGTCAGCCCCATACCTGCCATCAGCAACATGAAGCCCGAACCAAAGCcccaagaaaaagaaaaatctaAACCACCGAAGGCCAAAAAGaccaaaaaattaaaacaactcCGAGATACAAAAGTCAACGAAGAGGTCCTAAAGGTCAAAATTGAACTGGAAGCCGTTAAAAGCCAGTTGGCAGCTATAAAGAAGCGAGCAGGTCTCAACCAGGATGAATGGCTGAAGGACCAGGCCGGTGGTCATCCAATACCAATGCCGGACAGTTACCTGCTGCCGGGCATGTGGTGTTGCAAGTGGCATAATGGTGAACCGGTCGGCATAAGTGAGATGGAGTTTGATTCAAAGGACGCTAAGGGGCTGCCACGGCGGTCTGTTCAGGTAGAGGACAAGCGTCTGCCCTCTGGCTGGACGAAGCACATGGTGCGCCGCAGTCTCGGCACCTCGGCTGGCAAGTGGGACGTCGTGATAGTCGCGGTTCCCTCATCGGAGGACCGTAGCCGTTCACTCACCGCGAAAGTGAAGGAAAATGTTGCTAATGAAGCTCCGAGGGACTCACTTTCATCAGTTTGCGCCGCGAGGGGGGTTTCCTTGGGTCAGAGGTCGTTTTATAGATTAGCAGAATCGAAGGTGTACGATGGTGATCTGAGTGGAGCGGTTCGGGTATTATTGTCGGACTGTTCCATTGCACCTGATAATGACGAGACCTTGAAAGCTTTGAGAGAAAAGCATCCTTCTCCTAACCGACCTTTGGACTTTCCTCCTGAGCCTGATCTTTCTTTGGAGTGCATATCTGTGGAGTGGGGTGACGTTGTGCAGACAATTGCCTCTTTTAAGAACGGCTTGGCGGGTGGGTTGAATGGTTTGCGCCCTGAGCACCTTAAGGAGTTAACTTCTGTAGGGGCTGGTGATGGTGGGGTTGCACTGTTGAGTTCTCTATGTAACTTGACAAACTACATGTTGAAGGGCGTGATTAATAGCCCGGACAACAAACGCCTACACACCAAAACAGACATGCAACACTACCTCGACGGAATAAGACACGACGACTATCGCGCGTCCCTAGAGCCCTTCGAACATGTCCTGCTAGATTTCGGCGTCCACCGCAAGATGGCGCGCCGCCTCGGCTGGGATACGAAAACTGTGGGGCCAGACGGAGATGTGAGGCCGCCGCCGCTTATTAGTACGACGTCTCCGCTGGTGAAGTTGACGAAGATGAACGTTCGGAAGGAGAAAGCTAAAATGGCGGTTTCGAAGAGGAGGAAGATGAGCCTGCCCACTGGCTGGACGAAGCACATGGTGCGCCGCAGTCTCGGCAAATCGGCTGGCAAGTGGGGCGTCATGATAGTCGCCCCGGACAACAAACGCCTACACACCAAAACAGACATGCGACACTACCTCGACGGAATAAGACACAAAGAATATCGCGCGTCCCTAGAGCCCTTCGAAGATGTCCTGCTAGATTTCGGCGTCCACCGCAAGATGGCGCGCCGCCTCGGCTGGGATACGAAAACTGTGGGGCCAGACGGAGATGTGAGGCCGCCGCCACTTATTAGTACGACGTCTCCACTGGTGAAGTTAACGAAGATGAACGTTCGGAAGGAGAAAGCTAAACTGGCGCATGCGAAGAGGAGGAAGATTAGCTCAGGAGGGTACTCTAACTCGTCATCCGTGACGTCATCGCCAGCGGATCAGGCGGTAGCTGGCGCTGTGACGCCCAGCGACACATGCTTCGAACACCCGCCGTTGGAAGACGGATACGTGTATGTTGGTTCGTTAAAAGTACAAATTATCGAGAATCTCCTCCGGTGCCCGGCCGACGCCTGCTTCAAAAACTTCCGGACACCCACACTGCTGCAAATGCACATAAAGCACTACCATAGAGAAATGCGAAAAATGATGGGCGCTACTCCCAAAGTGGCCGACCTAGCCTCAGCCAGGGCCACGCCGCTGATGCCGGACAAGATCAAGACAGAAAGCGAACCTAAAGTCCCCAAACTGAAAATAAGCAAGAAACGCGTCGAGGAAATAAAGATCGAGCCCGTAGAACCCAAGTACGAGATGAAAACGGAAACAACACCAATGACAACACCTACCAGAACCGACCCGGACAAGATACCCCGGTCCCTAGACTCCCCAAGACTCAGAAACGCGCTCGTATTCAGCTCTAAGCCTCACAAGCGGCCAAGAGTTCTCCTGCCAGTCAGAAAATCAGAAGAACCACAGGACGACGCAGATTCCTCAGACTCCACTGACTCCGAAATTAACGTATCATCCAACGTGGAGCAATTAACTGTACTGGACTTCGAATCAGCCATATCCACCCACACAGTCACAAAACCAGTTGTGTCTGAAAAAAAGAAGAAGGGAGAGAAACGCAAGAAGACCTTCGCCACGATATCCAAGGTGAAGCCAGGCAGTGATGATGAAGaatgggacgccaattccgacTACGAGACTAGATCTAGTTTCCCGCGGTCGGGTAGTCCTGACTCCAAGTTTATGGACACTTCTACCATGCCGGTGTCGTCGGAGTCCACTGAGGATCAGAAGGATCCAAATATGTACATGTTTACTGAGACCGGCGAGCGTATAAAGCTGGTGCATATGAAACGCGAAGAAATCATCAATTGTCACTGCACGGTCCGTGAAGAGGACGGTCTTATGATACAGTGCGAGCTGTGTCTGTGTTGGCAGCACGCGCTGTGTCACAACATACACAAGGAGGCTGAGGTCCCAGAAAAGTACACGTGCTCGATCTGCCTCAACCCGCGCCTGGGCCGTCGCTCGCGCCGCTTCCTGCACGACCAGGACCGCCTGTACGAGGGGCTGCTGCCCGGCGCGCGCGCCTGCCCCTCGCTGCGGCGCGCGCACGAGCTGTCGGGCAATCTGCTGGGCATACAGGACGCGCTGCATGCGCTGCGTGTGAAGAACTATGTCGCCACGTGA
- Protein Sequence
- MAIKNCCIEDCFSCSTKEEDVGVTYHKFPKDTTLRDIWTKITQFIDKDVKLPYVCSRHFCKSDFQSLKDSKYVLKSDAVPSIFPWTIRDISDINMESNEKEKDASKENNTEPMQAEANKPKTVQPDEPKLDDVENASVGLDTSKESEGEGIEAIRKFIEEQEKEIQELQAEVKPLTPRIVSETYSKKDEEIKTEKQDSKDEAKGSEVAISDNNVLDDLSNDAIIEDDKSDNVKSKEDRSDDTERHEYVKITIEDKSNDNKTRGGTSNAKKTQMKDKKPKKDLVLEEQHDENMSMTVASDVMNIILSESEAKLAKPTDGVKTPKQNLLSGEKGSSSMALSVGSKIEAKDYGEHWHSANIAEVDYDEMEVLVRYENLSKKHDEWISVSSPRLRPQGSPAKAQAELNPEPVVKEDPREEKPKMPYKVGDRCLARWRDNRRFQATVLADFGDGNYEVVFDDGFVWRCPVVRLSKMRVGDRKSSLSIPLRVNTALPPAPSPLPTPPGSTAEPPYHTHLFDPARDFLGSKSDRRERKRKLNIKEIFNIGQKKKKDESASAKKVKTEPAEKKPKVVKQKAESAKGIHIKTEVKPVLPDAVACIIGSVAEDVPIKTEIKEVVIKQEEPQEATDVEEDKMQVDEVVMIDPSLPVDTEVQEEEPKDDTNADSITIKNDEEMLKILEAYNKIEDKFSKPVSPIPAISNMKPEPKPQEKEKSKPPKAKKTKKLKQLRDTKVNEEVLKVKIELEAVKSQLAAIKKRAGLNQDEWLKDQAGGHPIPMPDSYLLPGMWCCKWHNGEPVGISEMEFDSKDAKGLPRRSVQVEDKRLPSGWTKHMVRRSLGTSAGKWDVVIVAVPSSEDRSRSLTAKVKENVANEAPRDSLSSVCAARGVSLGQRSFYRLAESKVYDGDLSGAVRVLLSDCSIAPDNDETLKALREKHPSPNRPLDFPPEPDLSLECISVEWGDVVQTIASFKNGLAGGLNGLRPEHLKELTSVGAGDGGVALLSSLCNLTNYMLKGVINSPDNKRLHTKTDMQHYLDGIRHDDYRASLEPFEHVLLDFGVHRKMARRLGWDTKTVGPDGDVRPPPLISTTSPLVKLTKMNVRKEKAKMAVSKRRKMSLPTGWTKHMVRRSLGKSAGKWGVMIVAPDNKRLHTKTDMRHYLDGIRHKEYRASLEPFEDVLLDFGVHRKMARRLGWDTKTVGPDGDVRPPPLISTTSPLVKLTKMNVRKEKAKLAHAKRRKISSGGYSNSSSVTSSPADQAVAGAVTPSDTCFEHPPLEDGYVYVGSLKVQIIENLLRCPADACFKNFRTPTLLQMHIKHYHREMRKMMGATPKVADLASARATPLMPDKIKTESEPKVPKLKISKKRVEEIKIEPVEPKYEMKTETTPMTTPTRTDPDKIPRSLDSPRLRNALVFSSKPHKRPRVLLPVRKSEEPQDDADSSDSTDSEINVSSNVEQLTVLDFESAISTHTVTKPVVSEKKKKGEKRKKTFATISKVKPGSDDEEWDANSDYETRSSFPRSGSPDSKFMDTSTMPVSSESTEDQKDPNMYMFTETGERIKLVHMKREEIINCHCTVREEDGLMIQCELCLCWQHALCHNIHKEAEVPEKYTCSICLNPRLGRRSRRFLHDQDRLYEGLLPGARACPSLRRAHELSGNLLGIQDALHALRVKNYVAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00162936;
- 90% Identity
- iTF_00162936;
- 80% Identity
- iTF_00162936;