Agoe068934.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- -
- Assembly
- GCA_949825045.1
- Location
- OX463821.1:1339158-1356324[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-09 7.9e-07 31.5 0.0 4 39 148 184 145 188 0.90 2 4 5.4e-10 2.3e-07 33.2 0.3 2 39 200 237 199 240 0.92 3 4 1.2e-12 5.2e-10 41.7 0.0 2 45 255 299 254 299 0.96 4 4 3.6e-17 1.5e-14 56.2 0.0 1 42 306 348 306 350 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGGCACGGCCTGCCCCGAGTAAAATGCGAACCTTCATCGGAGTCAGACGATGAGGACAGCAATTCACAATTCGCTCTGAACTTTACTCCAAAACAGCCGCCGACGCCGTCCACCCTCGAGGAGCTGGCGCCCCTCACACCAGCCGCGCCGTCCGCGACGCCAGTCTGCGTCAAGCAGGAAGTGCAGGAGTTGTCTGACGCGCCACCAGCTACGATGCTGGAGACCTTGGAGCCCGCGCCCTATGGTAGTATATCCCATCACATGGAGCACCACATGTCCCTGATGAGAGAGGAGTTGCCGTCGGAGTTCATGCCGCTGATGGCCGTCAAAGACGAGCCTATGTCTGAAGGAGAACAACCACATCTCAGCGGCGAAGACACGAGCGACTCCTGCGCAGACATCAGTCGCGGCAGCCCCAAGAGCTGGAGCCAGCAGGACATGGACAATGCGCTCGAAGCGCTCAGGAGCCATCACATGAGCCTCACTAGGGCGTCAGCAACCTTCGGCATCCCATCCACGACGCTCTGGCAGAGAGCCCATCGCCTCGGCATCGATACCCCCAAGAAGGAGGGCTCCTCCAAGTCGTGGAGCGAAGCGGACCTGAGGGGAGCACTGCAGGCGCTGCGGGCGGGCGCCATCAGCGCCAACAAGGCGAGCAAGGCGTATGGCATACCCAGCAGTACACTGTACAAGATCGCCCGTCGGGAAGGCATCCGTCTCGCCGCGCCCTTCAACGCGGCACCCACCAGCTGGCGCCCTGCCGATTTGGAGCAAGCCCTTCGATCCATCCGCACCGGTCACAACTCAGTGCAGCGCGCCTCTGCACAGTATGGGATACCAACAGGCACCCTGTACGGGCGGTGTAAGCGAGAAGGCATCGAGCTGTCTCGCTCTAACCCCACGCCTTGGTCCGAAGATGCCATGGGTGAGGCCCTGGAAGCTGTCAGAGTGGGTCAGATGTCCATCAACCAAGCTGCGATACACTACAACCTGCCTTACTCCTCCCTGTATGGAAGATTTAAACGCTGCAAGTACCCGCAGAGTGCGTTGCAGCTACAGCAGATACCACTGGAATGTCCAGAAATCAACGCCCAAAGTCAGCAGAATCCCGAAATGTATCAACAATACCACCAAGCCATCGCCCACCCCATACACCCAGAAGCCATCGACCATACAAATCCCCTACATTACCATCACAGTCCCATGCAACCTCATCACATGGAACCTCAAGTTAGCAACCAGGTGCACGATCCATCGATACTCCCAAATGTAATGTTCCACGAACAAGGTTATGGAGCGCATTACAATCAGGGACATAATGGTATAACTAGCAGCTGA
- Protein Sequence
- MPGHGLPRVKCEPSSESDDEDSNSQFALNFTPKQPPTPSTLEELAPLTPAAPSATPVCVKQEVQELSDAPPATMLETLEPAPYGSISHHMEHHMSLMREELPSEFMPLMAVKDEPMSEGEQPHLSGEDTSDSCADISRGSPKSWSQQDMDNALEALRSHHMSLTRASATFGIPSTTLWQRAHRLGIDTPKKEGSSKSWSEADLRGALQALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRPADLEQALRSIRTGHNSVQRASAQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYPQSALQLQQIPLECPEINAQSQQNPEMYQQYHQAIAHPIHPEAIDHTNPLHYHHSPMQPHHMEPQVSNQVHDPSILPNVMFHEQGYGAHYNQGHNGITSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00161463;
- 90% Identity
- -
- 80% Identity
- -