Aalb012933.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- -
- Assembly
- GCA_963457715.1
- Location
- OY735265.1:273178-288408[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.7 1.6e+03 -0.6 0.1 29 44 80 95 80 96 0.93 2 5 4.3e-10 2.5e-07 30.8 0.0 4 39 147 183 144 187 0.90 3 5 3e-11 1.8e-08 34.5 0.3 4 39 201 236 198 239 0.93 4 5 1.8e-13 1e-10 41.7 0.0 2 45 254 298 253 298 0.96 5 5 5.2e-18 3e-15 56.2 0.0 1 42 305 347 305 349 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCCACGGAATACCTCAAGTAAAATGCGAACCTACATCGGAGTCAGACGATGAGGACAGCAATTCACAGTTCGCTCTACAGTATACCCCGAAacagACGCCGTCCACCCTGGAAGAGCTGGCGCCGCTCACGCcggccgcgcccgccgccacGCCCGTGTGCGCCAAGCAGGAGGTGCAGGAGCTGACGGAAGCGCCCGCAGCCGCCATGCTGGAGACCTTGGAGCCCGCGCCCTACAGCAGCATATCCCATCACATGGAGCACCACATGTCCCTGATGAGTGAGGAGTTGCCGTCGGAGTTCATGCCGCTCATGGCCGTCAAAGAGGAGCCCATGTCTGAAGGAGAACAACCTCAGCTCAGCGGCGAAGAGACGAACGACTCGTGCGCAGAGAACATCAGCCGCGGCAGCCCCAAGAGCTGGAGCCAGCAGGACATGGAGAACGCGCTCGAGGCGCTGCGGAGccaccacatgagtcttactaggGCGTCGGCGACGTTCGGCATCCCCTCGACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGACGGCGGCTGCAAGTCGTGGGGCGAGCCCGAGCTGCGCGCGGCGCTGCGGGCGCTGCGGGCCGGCGCCATCAGCGCCAACAAGGCCAGCAAGGCTTACGGCATACCCAGCAGTACTCTGTACAAGATCGCCCGCCGGGAAGGCATTCGCCTCGCCGCGCCCTTCAATGCGGCTCCCACCAGCTGGCGGCCCGCGGATTTGGAGCAGGCCCTTCGCTCCATCCGCACCGGCCACAACTCCGTGCAGCGCGCCTCCGCACAGTACGGAATACCAACCGGCACCCTGTACGGGCGGTGCAAGCGAGAGGGCATCGAGCTGTCCCGCTCCAACCCCACGCCGTGGTCGGAAGACGCCATGGGAGAGGCTCTAGAAGCTGTCAGGGTGGGTCAGATGTCCATCAACCAAGCTGCGATACACTACAACCTGCCTTACTCCTCTTTGTATGGAAGATTCAAACGCTGCAAGTACCCGCAGAGCGCACTACAGCTACAGCAGATACCACAGGAGTGCCCAGAAATGAACGCACAAAGCCAGCAGAACCCGGAAATGTACCAACAATACCACCAGCACCCCATCACCCACCCGGTACACCCAGACCCCATCGACCACACCAGCCCCGTACACTACCACCAGAGTCCCATGCAACACATGTCTGACCCACAAATCAGCAATCAAATGCACGATCCAGCGATGCTCTCGAATGTAATGTTTCACGAACAAAACTATGCAATGCATTACAATCAGGCACATAATGGTATAACGACCAGCTGA
- Protein Sequence
- MPGHGIPQVKCEPTSESDDEDSNSQFALQYTPKQTPSTLEELAPLTPAAPAATPVCAKQEVQELTEAPAAAMLETLEPAPYSSISHHMEHHMSLMSEELPSEFMPLMAVKEEPMSEGEQPQLSGEETNDSCAENISRGSPKSWSQQDMENALEALRSHHMSLTRASATFGIPSTTLWQRAHRLGIDTPKKDGGCKSWGEPELRAALRALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRPADLEQALRSIRTGHNSVQRASAQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYPQSALQLQQIPQECPEMNAQSQQNPEMYQQYHQHPITHPVHPDPIDHTSPVHYHQSPMQHMSDPQISNQMHDPAMLSNVMFHEQNYAMHYNQAHNGITTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00162427;
- 90% Identity
- -
- 80% Identity
- -