Aalb012710.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyresthia albistria
Gene Symbol
-
Assembly
GCA_963457715.1
Location
OY735264.1:8314369-8334121[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00011 0.0066 17.4 1.5 1 23 410 432 410 432 0.96
2 20 0.0055 0.32 12.1 0.6 1 20 438 457 438 460 0.94
3 20 3.2e-05 0.0018 19.1 4.4 1 23 481 503 481 503 0.98
4 20 4.9e-05 0.0029 18.5 4.6 1 23 509 531 509 531 0.99
5 20 4.9e-05 0.0028 18.5 5.3 1 23 537 559 537 559 0.97
6 20 1.5e-05 0.00088 20.1 7.3 1 23 565 587 565 587 0.97
7 20 1.6e-06 9.1e-05 23.2 2.5 1 23 593 615 593 615 0.97
8 20 0.00013 0.0078 17.1 6.7 1 23 621 643 621 643 0.97
9 20 2.6e-05 0.0015 19.4 6.4 1 23 649 671 649 671 0.98
10 20 6.5e-07 3.7e-05 24.4 1.9 1 23 677 699 677 699 0.98
11 20 1.3e-05 0.00074 20.4 7.7 1 23 705 727 705 727 0.98
12 20 1.1e-05 0.00063 20.6 6.3 1 23 733 755 733 755 0.98
13 20 1.4e-05 0.00084 20.2 5.4 1 23 761 783 761 783 0.98
14 20 2.4e-06 0.00014 22.6 7.1 1 23 789 811 789 811 0.97
15 20 2.9e-05 0.0017 19.2 7.1 1 23 817 839 817 839 0.97
16 20 1.3e-06 7.3e-05 23.5 6.0 1 23 845 867 845 867 0.98
17 20 7.5e-05 0.0043 17.9 7.7 1 23 873 895 873 895 0.97
18 20 2.4e-05 0.0014 19.5 2.8 1 23 901 923 901 923 0.97
19 20 0.00061 0.036 15.1 0.6 1 23 930 952 930 952 0.97
20 20 0.034 2 9.6 5.4 1 23 962 984 962 984 0.98

Sequence Information

Coding Sequence
ATGAATCAGGAGCATCATAACATCAACTCGGGTGGTGCCCAACCCTCGGGAAACAGCGAGTCCCAGGTGCAGCGAGTGCAGTCTGTTCAGCAGCAGTCGAATAGCTTGACTCCTACCACGTCCGCTACTGATCTGAGGGTGAACTCGGCTGCAGTGAACGTTGCTTTGTCGAGCGTCGCCAAGTATTGGGTGTTTACGAACCTGTTCCCGTCACCCCAAGTCTCTGTGTATGGGGCGCTGCCTCCCGGCACTCGGATTGAGAATGGAAAGCCTGTTCAGGAAGGCCTCGGGCAAGCCCATGGTATACTTAATGGAGACCCGAATGTTATCCTTGGCCACCATGCTGGTGGTCAAGCCATCACTGTCCAGGGACCTGGTGGCCAACAAATACCAGTCACTCAAATTATTGCAGCACAAACTGGACAGACTCATGAAGCATTGGTAGCCCAGCAGCAAGAATTGGTTCAGCAGGGCTCCAGCCAGGTCTCCGTCAGTACAGGCCAGCAGGTACCCAATAATCCTCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGCCATCACTCACAACAGCACATAATGCAGCAGCAGTTAATGGCGACCCGGCCTGAGCATGCCAACCAACAGATCCAACTGACAGTGAGCGAGGACGGTATAGTCACTGTGGTGGAGCCGGGAGGAAGCAAGCTGGTGGACAAGGAAGACCTGCATGAAGCCATCAAGATGCCGGAGCACCAGACTCTAACGGTGCATCAGCTGCAGCAGATTGTTGGACAACAGGTGCTAGACAACGTGGTCCGCATCGAGCAAGCGACCGGCGAGCCCGCCAACATACTCGTCACACAGAACCCGGACGGGACAACCTCCATCGAGGCGAGCGCCGCAGACACGCTCGTGGTCAAGGACGAGAAGAGCTCCAAGCTTGATAACACGCAGTTCACTATCGCCAATGATATCAAGGACATCAAGGGCGCTATTGATTTGAAGAGCATCGGCGCTATGGGCATGGAAGGCGCGTTGGTGAAGATATCTGGCGGCCCCAACGAGAATGATCTCACAGCCTTGTACAAAGTGAATGTCGAGGACTTGTCTCAGATACTGGCCTACCATGAGGTGTTCGGGAAACTGAACGCCGAAGGACAGCCGACACAGAAGCCCATAGTGGAGATCGAGGTGGAGCCGGGCACGAGCGCGGCGCTCGACGCGGACACGGCGCCCGGCCACCACGCCTGTGACATCTGCGGCAAGATCTTCCAGTTCCGCTACCAGCTAATCGTGCACAGACGCTACCACGGCGAGCGGAAGCCCTTCACTTGCCAGGTGTGCGGCTCGGCGTTCGCCAACCCGGTCGAGCTGTCCCGGCACGGGAAGTGTCATGTCGCGGGCGcggcgagcgaagcggagcggaatGCCAAGCGGCTGGTGCAGGACAAGCCGTACGCATGCACCACCTGCCACAAAAGCTTCGCGCGCAAGGAGCACCTCGACAACCACGTGCGCAGCCACACCGGCGAGACACCCTACAGATGTCAATACTGCGCGAAGACGTTCACCCGCAAAGAGCACATGGTGAACCACGTGCGCAAGCACACCGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAGACGCCGCACCATTGTCAAATATGCGGGAAGAAGTACACTAGAAAGGAGCATTTAGTAAACCATATGCGCTCCCATACCAACGACTCCCCGTTCCAATGTGACCTCTGTGGGAAATCTTTCACCAGGAAGGAGCATTTCAGCAATCACATTCTGTGGCACACCGGCGAGACCCCGCACCGTTGCGACTTCTGCTCCAAAACGTTCACCCGCAAGGAGCACTTATTAAACCACGTGCGCCAACACACGGGGGAATCCCCGCACCGCTGTAACTATTGCTCCAAGTCTTTCACCCGGAGGGAGCATCTCGTAAACCACGTGAGGCAGCATACTGGCGAGACGCCCTTCCAGTGCGGATACTGCCCTAAAGCCTTCACTAGGAAGGACCATCTTGTGAACCACGTCCGGCAGCACACGGGCGAGTCACCACACAAGTGCTCCTACTGCACCAAGTCGTTTACTCGCAAGGAGCACCTCACGAACCACGTGCGCCAACACACGGGCGAGTCGCCGCATCGCTGCAGCTACTGCGCGAAGAGCTTCACTAGGAAGGAGCATCTGAATAATCATATACGGCAGCATACTGGTGAAACTCCGCATAAATGCACGTCGTGTCCGAAGGCGTTCTCAAGGAAGGAGCATCTAAACAACCACTTGCGGCAGCACACCGGTGTCATGCCGCATAGCTGCACCTATTGCAACAAGACCTTCTCGAGGAAGGAGCATCTCAACAACCATATCAGGCAACATACAGGCGAGACTCCGTTCAAGTGCACGTATTGTTCGAAGTCGTTCTCACGCAAGGAGCACTTGACGAACCACGTCCACCTTCACACCGGGGAGACTCCCCACAAGTGCCCGTTCTGCACGAAGACATTCTCCAGGAAGGAACACCTGACCAACCATATCAGAATACACACGGGCGAGTCGCCGCATCGCTGCGAGTTCTGTCAGAAGACATTCACGCGCAAGGAGCACCTCAACAACCACCTGAAGCAGCACACGGGCGACACGCCGCACATGTGCAAAGTGTGCGCTAAACCCTTCACGAGGAAGGAGCACTTGGTCTCGCACATGAGAGCGCACAGCTGCGGCGAGCGGCCGTTCAGTTGCGAGCAGTGCGGCAAGTCGTTCCCGCTCAAGGGCAACCTGATGTTCCACGAGCGCTCGCACTACaagagcggcggcggcgcgcggcccTTCCGCTGCGACGTCTGCACCAAGGCGTTCATGTGCAAAGGTCACCTGACGTCGCACCGACGCCTGCACGCGGAAggcgcgggcgcggacgcggcggcggcggaggctgCGGAGGGCGAGGAGTGCTCCGCCGCCTGCAAGTGCGAGCCGGGCGAGgagcccgcgcccgcgcccgcgccgccgcccgcgcacaAGGAGAGGAAGATCGAGAGAAATTCGACTGAAAACAGGACCTCTGAGGGGACGGTGGTGACGCAGACCACACAGAACAGCGCGACCGTGATGCAAATTACTAGCCAGCAAGTGCGATCCGGCACCGCGGAGGCGGCCAGCGTGACGACGTACGCGCACCCGCCGGCGCTCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence
MNQEHHNINSGGAQPSGNSESQVQRVQSVQQQSNSLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPSPQVSVYGALPPGTRIENGKPVQEGLGQAHGILNGDPNVILGHHAGGQAITVQGPGGQQIPVTQIIAAQTGQTHEALVAQQQELVQQGSSQVSVSTGQQVPNNPRVEFVQHHNIDMGHHSQQHIMQQQLMATRPEHANQQIQLTVSEDGIVTVVEPGGSKLVDKEDLHEAIKMPEHQTLTVHQLQQIVGQQVLDNVVRIEQATGEPANILVTQNPDGTTSIEASAADTLVVKDEKSSKLDNTQFTIANDIKDIKGAIDLKSIGAMGMEGALVKISGGPNENDLTALYKVNVEDLSQILAYHEVFGKLNAEGQPTQKPIVEIEVEPGTSAALDADTAPGHHACDICGKIFQFRYQLIVHRRYHGERKPFTCQVCGSAFANPVELSRHGKCHVAGAASEAERNAKRLVQDKPYACTTCHKSFARKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDSPFQCDLCGKSFTRKEHFSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLNNHIRQHTGETPHKCTSCPKAFSRKEHLNNHLRQHTGVMPHSCTYCNKTFSRKEHLNNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHIRIHTGESPHRCEFCQKTFTRKEHLNNHLKQHTGDTPHMCKVCAKPFTRKEHLVSHMRAHSCGERPFSCEQCGKSFPLKGNLMFHERSHYKSGGGARPFRCDVCTKAFMCKGHLTSHRRLHAEGAGADAAAAEAAEGEECSAACKCEPGEEPAPAPAPPPAHKERKIERNSTENRTSEGTVVTQTTQNSATVMQITSQQVRSGTAEAASVTTYAHPPALAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00704247;
90% Identity
-
80% Identity
-