Aalb008595.2
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- -
- Assembly
- GCA_963457715.1
- Location
- OY735259.1:5153553-5155463[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-12 4.1e-09 36.5 0.0 4 43 14 53 11 55 0.90
Sequence Information
- Coding Sequence
- ATGTCACCTGGACGTAAAAGACGTACGTGGGATCCAGTACAAATGGAGAAAGCCGTGGAAGCTGTTAGGAAGAAATTGATGGGATTTAAAAGGGCAGCAAAAACTTTTGATGTCCCTAGAACCACTTTAAGAAGACTGGCTAAAGATACCATGTCAACCGAATCAGTGGTCCGAAAGCCCTTAGGTAGACGCCCTATACTTTCaccttttattgaaaaaaaactggTTGAGTATCTGTTGTTCATGGAGGCTAAATATTATGGCCTGACACGGATGGACGTTCGTCGGCTGGCTTTTCAGCTGGCAACGAAAAACGAAATTTCGCACCCATTCAGGAATGAGGTGGCAGGACGAGCGTGGTTAGACCACTTTCTCAGAAGGCATAAAGATGAGTTATCACTTAGAAGCCCAACAGGAACATCCTATGCTCGTGCTCAAGGTTTTAACCGCGAAGCAGTCAAGATGTTCTTTGATATTCTACAAGCTGAGTTTGAAAAGAAACGATATGCTCCTGATCGTATCTACAATGTAGATGAAACTGGGCTAACAATCGTCCAAACTAAAATTCCTCAGGTTATCGGTAAAAAAGGCAAGAGACAGATAGGAGCTCTTACCGCGGCAGAACGAGGATCTCTTGTGACATTAGTTTGTTGTATGAGTGTATCTGGAAACTACATTCCACCGATGATGATATTCCCACGAAAGAATTTCACTGACACCCTCATGAAAGGTGCTCCACCTGGTGCCATAGGAAAAGTCCATCCCTCTGGTTGGATACAAGGAAACTTATTCACGGAGTGGTTCAAACATTTTATTGAGAAGACTAATCCATCGGAAGAATCTCCCGTAATGCTCATACTTGATGGACATTATAGTCACACACGAAACCTGGACGTGCTGACTCTTGCTCGGGAAAATCACGTCACGATCATAAGTCTACCACCACATACGACGCACAAGCTTCAGCCTCTGGACAGGACTTTCATGGGTGCACTAAAATCTCATTACAGTGAGGAAATTCGCAAATTCATGCTGCATTCTGACAGAATGATTAAGCCTTATGACATAGCTGAACTGTTTGGCCGCGCGTATATGAAAAGCACAAGTGGTGAACTTGCATACAATGGTTTCAGGGTAACGGGAATTTATCCTTTTAACCCATCCATCTTTACCGAGGCTGATTTTTTGGCAGAAGCACAAACAAACGCCCAAGCAAACCAAACTATAATCGATGGACAGTCTGAAATCAGAACATCGAGGGAACAGTCAGAACTGACAAGTGCTGAACCCTCAACATCCAGAAGTAATAGGCAACCAGCTACAGATGAGCAACGTGCAACCACAATGCCTGTTGACCAGCCAAATCTGACTATTTCAGAACCCTCAACTTCAAACCATGACCTCATTATGCCAGAGGATATTTTACCCATTCCTGGAGCCAAGAGAAAGACATCTAATCGAGGAAGAAAGCCAACATCAGCGGCAGTGATCACTTCGTCACCTTATAAAGCTCTTTTAGAAGACTCCTTGAACCGGTCGGCAGCTCGTGGTCGCGGCCAAGGGCGAAAACGCGGTCGTGGATGTCGTCGGGGAGGTATTCAGGATGCAGATATTCAACAAAGGGCTAGTCGCAAACGTTGTACACAGAGGAATGTTACATCGTCAGAGAGTAGTTCTGAAAGTGACGAGAACTTCACCCAAAATGAATCtggcgacagtgatgatgacacTGAGCATGAGAATGGAAGACCAGCCGAAAACATTGATGCTAATTGCATCTTTTGTGATGCTTGTTATTCTAACGACAAACGGGGAGAAACGTGGATTCAATGCCAGGCATGTGGGCTCTGGGCTCATCAGGATTGTGCCGGTCCTGAAGGGGAATACTACATTTGTGATTTTTGTCGCTAA
- Protein Sequence
- MSPGRKRRTWDPVQMEKAVEAVRKKLMGFKRAAKTFDVPRTTLRRLAKDTMSTESVVRKPLGRRPILSPFIEKKLVEYLLFMEAKYYGLTRMDVRRLAFQLATKNEISHPFRNEVAGRAWLDHFLRRHKDELSLRSPTGTSYARAQGFNREAVKMFFDILQAEFEKKRYAPDRIYNVDETGLTIVQTKIPQVIGKKGKRQIGALTAAERGSLVTLVCCMSVSGNYIPPMMIFPRKNFTDTLMKGAPPGAIGKVHPSGWIQGNLFTEWFKHFIEKTNPSEESPVMLILDGHYSHTRNLDVLTLARENHVTIISLPPHTTHKLQPLDRTFMGALKSHYSEEIRKFMLHSDRMIKPYDIAELFGRAYMKSTSGELAYNGFRVTGIYPFNPSIFTEADFLAEAQTNAQANQTIIDGQSEIRTSREQSELTSAEPSTSRSNRQPATDEQRATTMPVDQPNLTISEPSTSNHDLIMPEDILPIPGAKRKTSNRGRKPTSAAVITSSPYKALLEDSLNRSAARGRGQGRKRGRGCRRGGIQDADIQQRASRKRCTQRNVTSSESSSESDENFTQNESGDSDDDTEHENGRPAENIDANCIFCDACYSNDKRGETWIQCQACGLWAHQDCAGPEGEYYICDFCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00276303;
- 90% Identity
- iTF_00276305;
- 80% Identity
- -