Aleu011508.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- -
- Assembly
- GCA_963942445.1
- Location
- OZ012678.1:108994216-109003801[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3e-10 2.2e-07 31.6 0.0 1 38 739 777 739 782 0.90 2 4 3.4e-13 2.5e-10 41.0 0.1 2 39 794 831 793 834 0.94 3 4 4.9e-16 3.6e-13 50.1 0.0 1 45 848 893 848 893 0.98 4 4 0.53 3.8e+02 2.0 0.1 1 13 900 912 900 912 0.91
Sequence Information
- Coding Sequence
- ATGGCGTTAACAGCAGTAGAAAAACAACGATTGTGCAGACAAAGGaggaaagaaaataagaaagaaatgAAACGAAAAAAGAAGCTGAAAATAGAAAGAACGATAAAGAAAGAGCACGGACCGGCTGCCATTTGGGCACATTCAAAACCTATTTTGAGACTAATCAAAGAAATGAGTAAAGATATAAACACTATTCATTTCTTTTCAGATGGACCATGTACTCAATATAGGCAAAAAGGAAATTTCTTCCTATTCACTAAACTAATGTTTAAAGAAGGTTTTAAATATGGTACCtggaatttttttgaaagttcTCACGGGAAAGGAGCTGCAGATGGTGTCGGTGGTGCTTTAAAGCGTTCTGCTGATAAAATGCTTGCAATgcttggATTACTACGAACAGctgaacaattaaaaatcaaaggtCTTTGCGAAACAGCTGAAGCACCTGATGAAAATTCAACAGAtgcaacaacaaataatacaacaataacGGTGCCACAAGAAACATTATTACAAACGCAATCACAAATTTTAACAACTGGTAGTCTTCTATCCCAAAATTCCATACAAACAAATTCATCCCCCCAATTAACGAATAGTGTTATAAATCATAGTCAAAATAATCAACAACTATtaacaacatcaacatcaacaagtGGACAACCAACATTATATTCAATAGCAAcaccattatcatcatcatcatcatcgatACCATCTACAACTACAACACAATCATTAACTACAACAACAGCAACACAACGTAAAGCACGTGTTAGAAAACGTTCAAAATCACCAGTAATTTTAACCACAACTGATTCTCAAACAACTTCAACATCAGTAGTCCAACAACAACAAGTAACAGCAGCTGCAATACAACAAGcagtacaacaacaacaagcaATTGTTATTGCAACAGCAACTGGAAATCAAGCATTTAATAGTTCATCATCAATAGTTACATTAAATCCAAATACAGGTGCAATAACAACAATACCTAGTGGAACTGGTAGTATAATAACAGTACCAGCAAGTAGTAATTGTAATACTTTACAATCAGTAACTGGTCATAGTGGTCAAAATTCTGATACATCAATATCTGGTAATAGTTGTACACAACAGCAATCAACACAACAAATAGTTGTTGCAACATCTAGTGGTAATACAATAGGAACAATCGTTACTGGTGGTTCAAGTGCATCAACGGTAACTGGTACAGCAACAGTAGTTAATGCAAAAgcatcaaaaatttgtaaaactgaGTTAGCAACAAGTAATGGAAGTGGCGTTGTTACGCCTGGTACAATAGTAACACAAATAGTTGTAGCACGTGACGGTAAAGATAGTAAAAATATGGCCAGCTTAGGAATGGGAatgaaTGGAGGAATTTTGGGAGTACCAATGGGATTTTTGGATTTTGCTCCAGAACCACCGGCACCATCGGCAACACCTGTAACTGAACATGTTGATATGAGTTGCGCACCCAGTACTGATACAAGAGACTTATCTAACCCCACCGAAACTCTTGATATAGACAATCATTTAGCCCAACATATTATTCAACGTTTAGATCAAACAccaatacaacaacaaattcaacagcatcatcaacaacaacaacaacaacaacagcagcaacaacaacagcaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacaacaacagcaacaacatcaccaccaacaacatcaacaacatcaacaacaacaacatcatcaacaacatcaacaacaacatcatcaacAAAATACCACCAACAATAGTAACAATATTGCCAatgaaacaaattcaaatttaatacaaaatataaaaagcgaAATAATTGAAGTCAAGCAACATCAATTACAAACTCAAACCCATCATCAACAGCAATCACAGcaatcacaacaacaacaagttgTAGTACAGCAACAAGGACAATCACATCATCAGGTTATAACAAATGCTACCGTTATGGAAATTGATCCGAATAATATTAAGCATGAACCAGCCATGATTATAACACCAGAGATAGCAACAATCATGAATACTGGACATATGGACATTTACAATTCGGACACAAGTGAAGACAGCCTGATGATTGCTAATGGTTCCCCGAATGACAATAATGCGGAGCCGCATTATACTAATTTGGATCAACCACATGATAGTAAGTTAAATGGCCCGAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCCCTGAAGAATCACAATATGAGCTTGACGAAGGCATCCGTTACATATGGTATACCATCAACAACATTATGGCAGCGTGCGCATAGGATGGGTATTGAGACACCAAAAAAAGAAGGAAGTACCAAATCATGGAATGAAGATGCATTAAATAGTGCTTTAGAAGCTTTACGAACTGGTCAAATATCAGCAAATAAAGCATCAAAAGCCTATGGCATTCCGTCCTCAACATTATACAAGATAGCAAGACGAGAAGGTATACGATTGGCGGCACCATTCAACGCAGCACCAACAACATGGACACCCGAAGATTTGGAGAGAGCATTAGAGGCAATACGTGCTGGTCACACATCCGTCCAAAAAGCAAGCATGGAATTTAATATCCCAACAgGTACACTATATGGACGCTGTAAAAGAGAAGGTATTGAACTTTCACGTTCAAATCCAACTCCATGGTCGGAGGATGCTATGAATGAAGCATTAGTTGCTGTTAGGTGA
- Protein Sequence
- MALTAVEKQRLCRQRRKENKKEMKRKKKLKIERTIKKEHGPAAIWAHSKPILRLIKEMSKDINTIHFFSDGPCTQYRQKGNFFLFTKLMFKEGFKYGTWNFFESSHGKGAADGVGGALKRSADKMLAMLGLLRTAEQLKIKGLCETAEAPDENSTDATTNNTTITVPQETLLQTQSQILTTGSLLSQNSIQTNSSPQLTNSVINHSQNNQQLLTTSTSTSGQPTLYSIATPLSSSSSSIPSTTTTQSLTTTTATQRKARVRKRSKSPVILTTTDSQTTSTSVVQQQQVTAAAIQQAVQQQQAIVIATATGNQAFNSSSSIVTLNPNTGAITTIPSGTGSIITVPASSNCNTLQSVTGHSGQNSDTSISGNSCTQQQSTQQIVVATSSGNTIGTIVTGGSSASTVTGTATVVNAKASKICKTELATSNGSGVVTPGTIVTQIVVARDGKDSKNMASLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTEHVDMSCAPSTDTRDLSNPTETLDIDNHLAQHIIQRLDQTPIQQQIQQHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHQQHQQHQQQQHHQQHQQQHHQQNTTNNSNNIANETNSNLIQNIKSEIIEVKQHQLQTQTHHQQQSQQSQQQQVVVQQQGQSHHQVITNATVMEIDPNNIKHEPAMIITPEIATIMNTGHMDIYNSDTSEDSLMIANGSPNDNNAEPHYTNLDQPHDSKLNGPKTWTQDDMNSALDALKNHNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGSTKSWNEDALNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASMEFNIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01224126;
- 90% Identity
- -
- 80% Identity
- -