Apag009819.4
Basic Information
- Insect
- Arge pagana
- Gene Symbol
- FOXP1
- Assembly
- GCA_963969455.1
- Location
- OZ018311.1:24614526-24633798[-]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3 2e+03 -1.0 0.0 19 43 78 102 75 116 0.84 2 4 6.3 5.3e+03 -2.4 0.2 22 45 204 227 197 232 0.75 3 4 2.2e-27 1.8e-24 85.6 0.5 2 66 603 666 602 670 0.96 4 4 1.2e-05 0.0098 15.9 0.0 49 82 671 699 668 704 0.87
Sequence Information
- Coding Sequence
- ATGGCAGCAGAATCGGCAGCAGCGTCGCTGTTCACCGCGTTGAAGCATCACCAGCGCCTCGAGCAACACTTGACCATTCGTGATCGCGATCACCGCGCGATCGATGCTCTAGACCAGAGCCGAGATTCGGGATCGTTGGCTGATTACCAAGGAAATGGACAAACGAGTCCCACATCCGGACACCACAATCACAACTTCCACAACCAACAGCACCCGAACCATCAGCCTCATCACCATCAGCATCATACATTAGCATCAATAGCATCCATGACACAGCAAAAGCAACCTATCGTCACGCAACAGTCACAGCAGCCAACCACGGCTGGCCTCTTGTCGTCCCATCGTCACCAACAGCAGCCACAACCGCAGCAGCAATCGTCCACCTCGTCGAGTCCTGCCCGACAAAGTCCGAGAGCCTCCCAACAGGTCGGAAGCCCGTCGACGCCAACAGGAGTCGGACAGGCcgagggacagggacaggacCAGGGTCCACCCTTGTCGATCCAACAATCCCAGCAGAACCTCGTCCCGACACCGGCTGCACCTTCACAGATGATGCTCAGCCCTGCGAGCGGGCTTCATCAGATGCAGCAGCTACTCCAGCAGCACATACTCAGCCCGAGTCAATTACAGTCGTTCATGCAGCAGCACACCCTCTACCttcagcagcagcaacagcagcagcatcatCATCAGCACCAGCAACAATTGGCGGAATTGGGGAGGAAACAGCTGGAACAAACTATGCAGCAGCTCCAGGAACAACTACAGCTGAACCTCATCCAGCAGACGCATCTTCTGCAAACGGCCGACAAGAAGAAGGCCTCGGCGCCTCTTCAGCAGTTGGCCTTGCAGCAACAGCAGCTGATCCAGCAGCTGCAAATCACGCAGAGGCAGTACCTGCTCCAGCAAGGACTCGGTCTTCAAGGTCACAATCATTCGTCGGGTTTACAGTCGAGCGACAACAACATGCCAGTGTGGAAAACCGAGCCCATCGACACAGCGGATACGGCGCATCAGACCTCGAATGTTCACAAGTCGAGCGCAGGACTGAACGGACTCTTGAATTCCATTGTCTCCGGACGGCGATCGGAGATCAATGGGACGACGCCCATTGACGAGAAGCCGCTGGACGCGTCCTGCGGCGACAAGGTTCACCCGCTCTACGGCCACGGCGTCTGCAAATGGCCAGGCTGCGAAGTGATCTGCGAGGATTACCAAGCATTCCTGAAACATCTAAATACCGAGCACACCCTCGACGACCGGTCCACTGCTCAGGCCAGAGTCCAAATGCAGGTTGTCTCCCAGCTGGAAATACAATTGCAGAAGGAACGAGACAGGCTGACGGCGATGATGCATCATCTGCACGTGGCCAAGCAGCTCGCCTCGCCGGAGCCCTCGAAGTCCTCGGAGTCCTCGGGAGCCTCGAGCCTGTCGAAGCTGAACTTGTCGTCCGCCCTGATAACTCAACCGCCTCCGAATTTCGGCGTCTCGCAAGTCTCCCCCGTATCGATGTCCGCCCTCGTCTCGGCGGTGAGGTCCCCGGCCGGCGGCCAGCTGCCACCCTCCGGCACCGGCGGACCAAACTCGATGCCACCCCTGCCGAACATGTCCAACATCCCGGGGATGCCGCCGATGACGTCGATGCCCTCGTTACCCTCGATGGCCGGACCCATACGACGAAGGATAAGCGACAAGTCTGCTCTCTCGCTGGCCGGAGGGCTGCCCTACATGCTGGAGCGGGCTGGCCTTGACGTGCAACAAGAAATACAGAGGAACAGAGAATTCTACAAGAACGCGGATGTCAGACCACCCTTCACCTACGCTTCGCTCATTCGTCAGTCGATCATCGAGTCGCCCGACAAACAGCTGACCTTGAACGAGATCTACAACTGGTTCCAAAACACTTTTTGTTACTTCAGACGCAACGCGGCGACATGGAAGAACGCAGTGCGACACAACCTGTCACTCCACAAATGTTTCATGCGAGTCGAAAACGTGAAAGGAGCCAACGCGATCCGCACCAATCTATCATTGCACAAGTGTTTTGTGCGATACGAAGACGACTTTGGGTCATTCTGGATGGTGGACGATGCAGAGTTCGTTAAGCGGCGGCATCTGTCGCGTGGCCGCCCCAGGAAATATGACCCAACCCCATCACCCACTCCACCCCACCTCTCCGCACAGGGTGTTCCGTCGAAGAGTCCAACGATGACCCACAGTCCGACGATGTACGGTGACGCTCTCAACGCGAATCTCCAGTATTTCCAGGCTGCCCTCGGCGAATCTAACATGGGCTTTCTGAACAACTCGATGTGCACGTCGACGGCGACGAGTCCGGACAAGGAGCATCTACTTACCCACAACGATTTGATGTCGCCCCTGGATGAACCAGGTGTGCACATAAAGCAGGAGGGTCAGAGTCCGGAGGGTGGGAAATTATCGAGACTGATAAAGAGAGAGCTGCTCGAGGCGCCGATCGAgcaggaagaggaggaggccGTCGACGATCGGGAATACCCCGAGAGCCAGAGTCACGACTCCGGCCAGGACGAGGACATGGCCGAGGACTTATCAATGGCGCCGGACACGatgcaccaccaccatcaGTCTGAGGATCAGATCGAAGCGTAG
- Protein Sequence
- MAAESAAASLFTALKHHQRLEQHLTIRDRDHRAIDALDQSRDSGSLADYQGNGQTSPTSGHHNHNFHNQQHPNHQPHHHQHHTLASIASMTQQKQPIVTQQSQQPTTAGLLSSHRHQQQPQPQQQSSTSSSPARQSPRASQQVGSPSTPTGVGQAEGQGQDQGPPLSIQQSQQNLVPTPAAPSQMMLSPASGLHQMQQLLQQHILSPSQLQSFMQQHTLYLQQQQQQQHHHQHQQQLAELGRKQLEQTMQQLQEQLQLNLIQQTHLLQTADKKKASAPLQQLALQQQQLIQQLQITQRQYLLQQGLGLQGHNHSSGLQSSDNNMPVWKTEPIDTADTAHQTSNVHKSSAGLNGLLNSIVSGRRSEINGTTPIDEKPLDASCGDKVHPLYGHGVCKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVQMQVVSQLEIQLQKERDRLTAMMHHLHVAKQLASPEPSKSSESSGASSLSKLNLSSALITQPPPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSGTGGPNSMPPLPNMSNIPGMPPMTSMPSLPSMAGPIRRRISDKSALSLAGGLPYMLERAGLDVQQEIQRNREFYKNADVRPPFTYASLIRQSIIESPDKQLTLNEIYNWFQNTFCYFRRNAATWKNAVRHNLSLHKCFMRVENVKGANAIRTNLSLHKCFVRYEDDFGSFWMVDDAEFVKRRHLSRGRPRKYDPTPSPTPPHLSAQGVPSKSPTMTHSPTMYGDALNANLQYFQAALGESNMGFLNNSMCTSTATSPDKEHLLTHNDLMSPLDEPGVHIKQEGQSPEGGKLSRLIKRELLEAPIEQEEEEAVDDREYPESQSHDSGQDEDMAEDLSMAPDTMHHHHQSEDQIEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -