Apag012984.1
Basic Information
- Insect
- Arge pagana
- Gene Symbol
- retn
- Assembly
- GCA_963969455.1
- Location
- OZ018313.1:14693237-14698269[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-17 9.1e-14 51.6 0.1 29 89 4 62 1 62 0.93 2 2 6.1 1.3e+04 -3.4 0.0 36 51 125 138 116 148 0.71
Sequence Information
- Coding Sequence
- ATGGCGAAATCGGTGCTCGATCTCTACGAGCTCTACAACCTTGTTATCGCCAGAGGCGGTCTCGTGGACGTCATCAACAAAAAGTTGTGGCAAGAAATCATCAAGGGTCTTCACCTGCCATCCAGTATTACTTCGGCAGCATTTACGTTGCGGACGCAGTACATGAAGTATCTGTATCCGTACGAGTGCGAGAAAAGACGGTTGTCGACACCAGCAGAGTTACAGGCAGCCATCGACGGTAACAGAAGAGAAGGCCGAAGGAGTAGCTACGGAGCGTATGGCGGTGGCTCCGGAAGTGGCGAGTCTATGGTTCGCGGCAGCCCACATACACCGAGCTCGCTCTCCCTTCACGCTCAAATGTCACCGTTATCCTTGGTCACCGCTGTTTCCGGTGGGCAACATCACGTACAGCAATCTATGGCCAACGGTAGTGCAGCGCACACCCCTTTGCCCCATCACCCGCATCATCCGCAGCATCCCCAAGGACCACTAGGACAAACGTTGAACACAGGACCGATTCCGGGATTGGCACCGTCGGAATTCGAAGCACGAATGGTAGAATACGTGAAACTGCTGAACAAGGAACTGCGCAGCGCTGGCGCCGGCACACCACCTCCCATGATACATCGCCAAGGTAGCGCTTCGCCGCCACCGTCGACCTCGCCGCGCGATGCAGCTCTCAGCGCTCTAGAAATGTCGAGATTGACCTTATGGAACAtgtacaacaacaacactctCTATCCAGGCGTGGGCCATCAACCTCCCATGTCTCCTCAGCCACCACACTCTCCGGTACCACCAGCAACGAGTCCCGAGCCTCAAAGAGAAGCGTTGGATCTTGGCTTGAGGTCCTCGCCGATGTCGTCACCGCCAGCTAGAAACACACCACCTTCGTCGGCGATTGCAAGTAGCGTACAAGTAAAACGTGAACAGGACCTCGGAGGTATGGCGATAGGACCACCGCCGGCGAAGAGGTCACTCGCCGAGGATGAAAGTTCGTCTGAAAAAGTTCTACCGGGAGTAACCGGAACGCacataaaaattacaaacagaGGAGACGGGCGCAACGGTGATAATTCCCTCGTGGTCAGTATGGAGCTGAACGGAGTGATGTATCAGGGTGTCCTGTTCGCGCAGACGGATAGCACGACATCGACTACTACAAACAACACCACAAAGTCATCGCGCGGCGTGGTGTCGTGA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYGGGSGSGESMVRGSPHTPSSLSLHAQMSPLSLVTAVSGGQHHVQQSMANGSAAHTPLPHHPHHPQHPQGPLGQTLNTGPIPGLAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPPSTSPRDAALSALEMSRLTLWNMYNNNTLYPGVGHQPPMSPQPPHSPVPPATSPEPQREALDLGLRSSPMSSPPARNTPPSSAIASSVQVKREQDLGGMAIGPPPAKRSLAEDESSSEKVLPGVTGTHIKITNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDSTTSTTTNNTTKSSRGVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- -
- 80% Identity
- -