Basic Information

Insect: Arctopsyche grandis
Gene Symbol: Hr39
Assembly: GCA_029955255.1
Location: JARCGT010000028.1:5598940-5606856[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3 2.8e+04 -9.0 11.5 97 152 313 393 211 433 0.41

2 3 1.3e-11 1.2e-07 32.1 0.0 1 134 554 685 554 704 0.63

3 3 3.4e-67 3.2e-63 215.2 0.0 207 408 709 908 700 908 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3	2.8e+04	-9.0	11.5	97	152	313	393	211	433	0.41
2	3	1.3e-11	1.2e-07	32.1	0.0	1	134	554	685	554	704	0.63
3	3	3.4e-67	3.2e-63	215.2	0.0	207	408	709	908	700	908	0.96

Sequence Information

Coding Sequence: ATGACCAGCACGACTGCTGGGAATTCTTTGCCCGATACGGGCAACGCTAAAGGGGACCCCACCGGACAAGGCTCCGGAGGATCATTGCTGGGTGTCGGAAGGAATGTTTCCGTCACACCGATCAACATGAGCGACTCACAATTCAATAATGGAAAATTCTCCTACAGTTCCAACGGTATTCGCATCAGCGTACCCTCCGAAGAACGACGGAGAGTGGTTGGAAATGTTAACATTGACGATGAAGACTCAAACGATGCCGAAGTATCAAAGATTGATTTTTCACAACATCATTACCAGgttAATATGCGTACAAAAAAGAAAAGACCATCATCAAGTACGCTATCCCTTAACGCTGAAGGACAAAATCAAGACAACGGTACGACGGTTAGTGACCGGGACCGAGAGCGTCCCATGTCATGGGAAGGAGAGTTGTCCGATTCAGAAATGCTGGTCGACACAAACACGTCCAGCACTCCGGACACACTTCTCGGCATCAGTAAAACGCCACACTCTGATTTAGAATTTAGATTGGGACCTCAAAAAGAGGGTAATGGATACTGTTTGAAGACGGAACCTGTGGAGAGAGACGGTGTGTTTGCTGCGGCAAACAGACACAGTTCAGTCTCTTTTCAGAGCCTGAACGATCACGATGCGCTCAATTTGAAATTCGGCAGCTCACATCATATGTTACAACAGCATCAACGTAGTCATAGTATGAACAGGGTATCAATATTAtccaatgataataatttagaTATCAAAAATTCGCCATTAATACAGCAAAAACCTTCACAAGAAATTAATAGTGGCAGCGAAAGTGGATCTGAacctttaattaaaaatataccggCTAATATTATTCCAACAACGTTGAGCAATAAAATGGCGTCAGAAGCGCAAGCTTATGCAGCTAAACGAGAGCAACTTATGCAGCAAACCAACATATCAGAAATAAAACCAGAGTTGCCTTGCTTCGTAGACAAACTCCTCGGAGGATACTCTTTGCACAGCACTCCTAGCAATTCACCTCTTCTCAATAGGCATCATAAAATAGTATCGAATCCAAGCACTGATTCCGCTATTCattccatatatacacacagTGTTTATAGTAGTCCTTCAGCGAGTCCCGGGGCTACGAGACACGCCCAATACACCCCGTCTCTATCTCGTAACAATAGCGATGCATCACACTCATCTTGCTACTCGTACAGCTCTGAATTTAGTCCCACACATTCACCCGTCCAGAGTCGTCATCCAATACCCGCACACCCGGCGATACTCTTTAGATCTGAGCACGGAGCTTTCGCTCGGCAGACTAGCGCAGCGACGTCTTCGGGCCCTTTGGAAGGATGCACCGAAGGCGGAGCTGGAAGTCCCGATCCCGACGGCTCTGATGATCGTGTTCATCATCATCAGGGAGTCAGTAGACAACAATTGATAAAtagtCCGTGTCCTATATGTGGGGATAAAATATCTGGATTTCACTATGGAATATTTTCGTGCGAGTCATGTAAAGGATTTTTCAAACGAACTGTACAAAACCGGAAGAATTATGTTTGTTTACGTGGAGCCAATTGTCCCGTCACTGTAGCGACTAGGAAGAAGTGTCCCGCCTGCCGTTTCGACAAGTGTCTCCATTGTGGAATGAAACTGGAAGCAATAAGAGAAGATAGAACACGAGGCGGTCGATCAACCTATCAATGTTCATACACATTAAGCGGAGCGGCTTCTACGAGCTCACTTTTAGGCGCCGGTCTACAATCAGGTCCTTTACGCCATGCAACTAGTCTTACATCGGTTAACGGTCCTTCATCGCACTTATCGTATCACTCTCATCACGATTTGCATTCGGCATCAATGGGAAACAACGTACCTTTGAGTAGGCTCACCCAATCTGGCGTCAAGTCGGAGCCAGGTGGTCATCTAAGTCAAGCTGAAGCTATCGGAGTGCCACCATTATTACAGGAAATAATGGATGTGGAGCATCTCTGGCAGTACAACGAATCGGAATTGACGAAACTCAACAAGCCTCCGCCTCCTGCTGGAAGCTCTTCAGTGCTCGCACCGAATCCGGCTATCAATCCATTTTTGAGTGCTGCTGGCGTGACTGCCGATGCTTCGCCCGACTTCCTCTCTAACCTTTGCAATATAGCCGATCATAGATTGTATAAGATTGTCAAGTGGTGCAAGAGTTTGCcgcttttcaaaaatatatcgatcgACGATCAAATTTGCCTTTTGATAAACAGTTGGTGTGAGCTTTTGGTTTTGTCGTGCTGTTATAGAGGAGTTGGCACTCCCGGTGAGGTCAGGGTCGGCGGAGGCAATCGCGGCATCACACTGCAGCAGAGTACcaaaatGGGACTTACACCGTGTATTGAAAGGATGCTACATTTCACCGATCATCTTCGCAGACTGCGGGTAGATCGGTACGAGTACGTCGGCATGAAAGtcattgtattattaaattcagacaCGTCAGATCTTAGGGAGCCGGAGAAAGTGAGGGCTTCTCAAGAGAAAGCCTTGCAAGCGTTACAAGCGTACACTTTAGCTCATTATCCCGACGCTCCGGCCAAGTTCGGAGAATTACTCTTAAGAATACCCGAACTGCAACGGACTTGTCAAGTCGGGAAAGAAATGTTGAATCCATCCAACAAATCAAAAGACGGAGAGACGTCCAGTTTCAATTTACTAATGGAGCTACTGCGAGGAGATCACTAA
Protein Sequence: MTSTTAGNSLPDTGNAKGDPTGQGSGGSLLGVGRNVSVTPINMSDSQFNNGKFSYSSNGIRISVPSEERRRVVGNVNIDDEDSNDAEVSKIDFSQHHYQVNMRTKKKRPSSSTLSLNAEGQNQDNGTTVSDRDRERPMSWEGELSDSEMLVDTNTSSTPDTLLGISKTPHSDLEFRLGPQKEGNGYCLKTEPVERDGVFAAANRHSSVSFQSLNDHDALNLKFGSSHHMLQQHQRSHSMNRVSILSNDNNLDIKNSPLIQQKPSQEINSGSESGSEPLIKNIPANIIPTTLSNKMASEAQAYAAKREQLMQQTNISEIKPELPCFVDKLLGGYSLHSTPSNSPLLNRHHKIVSNPSTDSAIHSIYTHSVYSSPSASPGATRHAQYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQSRHPIPAHPAILFRSEHGAFARQTSAATSSGPLEGCTEGGAGSPDPDGSDDRVHHHQGVSRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGANCPVTVATRKKCPACRFDKCLHCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTSSLLGAGLQSGPLRHATSLTSVNGPSSHLSYHSHHDLHSASMGNNVPLSRLTQSGVKSEPGGHLSQAEAIGVPPLLQEIMDVEHLWQYNESELTKLNKPPPPAGSSSVLAPNPAINPFLSAAGVTADASPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVGTPGEVRVGGGNRGITLQQSTKMGLTPCIERMLHFTDHLRRLRVDRYEYVGMKVIVLLNSDTSDLREPEKVRASQEKALQALQAYTLAHYPDAPAKFGELLLRIPELQRTCQVGKEMLNPSNKSKDGETSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01218384;
90% Identity: iTF_00158113;
80% Identity: iTF_00158113;