Basic Information

Insect: Arctopsyche grandis
Gene Symbol: -
Assembly: GCA_029955255.1
Location: JARCGT010000150.1:1022515-1035346[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.4e-16 3.7e-12 46.3 0.0 9 69 217 275 212 280 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.4e-16	3.7e-12	46.3	0.0	9	69	217	275	212	280	0.90

Sequence Information

Coding Sequence: ATGGCGGAAGAGGCCGTGACAAACGAGGAGGCCAACGGGGAAGACGATGCGACACCGAAAATCAACGGTGTCGAGGAGAGCATCGCCGATCCCAAAGAATCCTACAGTGCGGACACATCGTCCAAGACCGATGACATCCCCGAGTCTCCGGTGGTCTTACACTTCGAAGACAGTCCCACGCGAGACAACAGTAAAGCCGCCGCCGCCGAAGAGTCGGACGCTTCGGAAGTAAATGAAAACGCCAACGGCGACGCTGATACAATCGAAAGCAATGATTCTATGAAGAATGGTTCTTTGAAAAGGCCGGCCAGCTTTTCGTTTGAAGACAACGATGAGGATTTGATAGCTTGCGATGGATCGACGTGGACCGACCGAGCTCTCGAAAGGCTGTTTCTGTCCATAGAGAGGCTAGAAAGGGAGGTGGACGAGCATGCACGAGCTAAAGGACACTCCTCTAATAAAAGACCTCGCAACTCGTCTCCAGCTCACAGCGCTACCACAGACACAGTGTCTTCTCGACCCTCGTCTGGTATGTCCATTCGTTCCGAGAGTGAACTGATAAACGCCGTGAGCGAGGTGTCCGGTGCTGGTTCTCGTGTCTCGTTCAGCCGCAAGAGTACCGTAGATCTGTCCAATCCCCTGTTTAAAATGCCGATGGACTGCGGCTGGCGGCGAGAGTTGGTGTACCGTGCTAACAATGATCAAAGCCTACGACGTCAGGCCGACGTTTACTACTATTCTCCGACGGGGAAAAAATTGCGCTCAACCCGAgagGTGGTTGAGCATCTCATCGATACCGATTTAACTGTTGATAATTTCACTTTCTTCAAAGAACCTATCGGATTAGAGGATCCTGAAAAAGAAATAATTagAGAAGCAAAGGTTCTCAATAAAAGCAGAACGGATTCGCCGCAATCGATCGTAGACGATAGTCTGACGGCTGTTTCCGAAGGAAAACGCACACCTAAACCAAAGCTCCCCAAAGGTTCATCGCCTGAACAAATAGCAACCGGAAAAGTAAAACCCTTCAAGGTCAAATCTGTCGGATCCAGACTGAACGCTGGCTCACCGACGACCGTAGGAAAATCAACACCGAACACGGAATCAGCAAACTCACCGCCCAAAGCCCGAAAATCTACCGATTCCGTATCCAAGTGGAACAAATCAACGCCCGACTTGGAAGATTCGCTGGATTACGAGTCTCCGACCCACTCTGACAAACAACCCGACATTGCGATGAGTCCCGAGAAAGTGTATTTCACGCAGTCGGTCGATCAGCTGACCGTGCCGAAGATTTTCCCCGCAGTGTTGCAGGCATCGGACCCGCCGCCGACTGTAGTCTCGCCGCCTTCGCTGAAGAAGTATGTGGCGCCGCTCGCCAATCCGATCGCAAATTCCATCGCCAACTCAATCATCAATCATATGCCGATTGGGAATCAGATCAATAATCAAATCGCCAATCAGATGATGAATCAGATAGCCAGCCAGTTGGTGAGTCAGGTCGGGAGTCAGATGGTGACCCAGATGGCGACTCAGATGCCCGCCCAGATGATGGGCCGTGACATGTGTCCTATGCGTTGTCCGCTGGCGAATTTGGAGCCGCCCTCGCTTCAGTGCAGTCTGTGTCTCTGTCTTTACCACAACCAGTGCACCGGCTACATTCCTAGTTACAACACGTCCTTCGTGTGCAAgAATTGCCATCTGGCGAATTCGAGCATGCCGTCGTCGTCCTCGTCGCCGTCCCAATTGTCGCACATGTCTGGAATCAGACCGATGCAAAAGTCGCCGTCGTCGGCCTCACTGTCGGGATCGTCGGTGCTGCAGCGTTTTCCGAAGCCGTCGCCGATCGTCACTAAAGCTCCGCCGCAGCCGAAGCTCGTCCCCGTCGTCACTCACGTTCGACCGAAGACGACGTTCAACCAGAAGCTGACGAAATCGGACGCGTCCTCGTTCAAGTCCGTTCAAAAGTATCCGAAACCGCTCGTCAGCGCCGACaacaaaatgaataaaaacaacTCGACGGTGTTCACGGGCACGCAGATCGTCGAAAAGCCCCAGAGGCCGACCGAAGTCGATCCGGCCATCTTTCCGCAGTCGATAGCGATCCTCAACGGTCACAAGTTCATAGTGGTGCCGAAGCCGAACGTGGCCAACACTTCGCCGGTGTCTGGTGTGGTCGCCAACCCGAAGCAGGCGGACAATGCTCCGAAGATAATCGAGACGACGTTCAACATCAGCAGCAACACGACCATAACGGCGATCAAGCCAACGTTCAAGCCGATCGAGGAGATCCTCACCAGGGATGagaataaaatcatacaaatgaaACCGACGGTGATCAAGAACGAACCGTTCAACACTCAGACGAACGTGATCAGCTTCGACAACCTCAGCGCCGAGTACGGGAAGCTGCTCTTCAAATCGGATCCGGCGAACATCTCGTTCGAAGCTCCCGGTATCAAACGTAGCCTCTCGTCCGATGTTGTTGAAGAATCTGCAGCGAGCAAGAGGAAAACGAGGGGTCGGCCGGTGCTGAAGCTGATACCGAGGGTCGCCAAGAAAGCCGAGAACGGAACGACTGGGCAGAAAGTCGGACGCCCCCCAAAGGCCGCCGAaggaaagaataaaaactattttgccgacttctataaaataaatcaagagAGAAAGTATAATTCGCTCGTACAGATATTCCAGTACCTGAAAATGAGGGAGCTGGCGGCTGCCGCTCGCGTCTGCCGCATGTGGAGGGAGATCGCCGACACGCCTGCCCTCTGGAGGTCTGTGCGTATGAAGAACTCGCAGGTCAACGATTGGGAGGGTCTAGCCGGTGCGCTCAAACGACACGGCACCCGACACTTGGACTTGCGGAAGATGCTGCTGCCGTCGGAGGTGCCCGACCAAGTTTGGGATCAGTTCACGGAACACATAGCCACTGTCGACTCCCTACTTAGAATAGACCTGTGTCGTTGTCCTGCTTCGGTTGTGGAGCGGGTCTGCGCTCGTATGCCTCAACTCCAAGCGCTGACTGCGATGAGTGTACGATGCACGGAATTGAATCCGTCGCCGTTGACCACGCTCACTAACCTTCAAGAGTTGCGCATAAAGGGCATGACGAAGCTCACTCTGACGTCGGACCTAAAATGCCTAGAAAACTTGACCAAATTGAAACACTTGAGCATCACGTCTGTCAAAGatTTGGGACAGTGCGGGTGCATAGCGGTCGGCGGGCTCACGTCCCTGGAGTCTCTGGAGCTGGGAGAGTGCACTGGAGAAGTCGGCGGAGCTGCGCTTCTGCGTCATCTGACCTCCCTCACCCGTTTGAGATTAGAGCGGTGTCCGGGAGCCAACGGCGGTTCGACTCTCATTCGCACAGTGTCCAATTTGCCGCTGCTGCGACAGCTCGAACTCATCAACTTTGATATCCGAcCTGGATTCGAAGACGCCCTCGGAAAGTGTACGAATATCAAAAGACTACTCATCATTCCGACGTACGTATCACAATCGGCCACGACCAATCGGTGCGTTCTAGCCGGCGTGCTGCGTCTCCGAAACTCGCTCACCCACCTAGTATGGGGCGTCACAATAGAGCTGCTCCGTGTCACAGAACTCTTCATCGACCAGTGCGGGCGTAATCAGAAGGAGTCGCAGACGGCTTCGGGCACGGGTCAGACTTCGGATGCGAAACAGGCGCAATTGGCGCTGATGAGCGTCGTCACGCAGAGGAATCCCAAAGTTGTGGGTGATTGTATACCCGTGTTGAAGCCGGTGCCGAGTCGGCCCGTCGAAGAGTCACGCACCCCGGCCGTTCCTGGACGGCCACAGGTCGAGATACTGCCCCTGCCGGCGTTGCAACGTCTGCTCGCCGAGGAGTTGCCCGACACTCGGCTCAAGCTATTACGCATTCCCTATCACGCCACATGGCGGCAAACCTTCAACGACTTCGACTAA
Protein Sequence: MAEEAVTNEEANGEDDATPKINGVEESIADPKESYSADTSSKTDDIPESPVVLHFEDSPTRDNSKAAAAEESDASEVNENANGDADTIESNDSMKNGSLKRPASFSFEDNDEDLIACDGSTWTDRALERLFLSIERLEREVDEHARAKGHSSNKRPRNSSPAHSATTDTVSSRPSSGMSIRSESELINAVSEVSGAGSRVSFSRKSTVDLSNPLFKMPMDCGWRRELVYRANNDQSLRRQADVYYYSPTGKKLRSTREVVEHLIDTDLTVDNFTFFKEPIGLEDPEKEIIREAKVLNKSRTDSPQSIVDDSLTAVSEGKRTPKPKLPKGSSPEQIATGKVKPFKVKSVGSRLNAGSPTTVGKSTPNTESANSPPKARKSTDSVSKWNKSTPDLEDSLDYESPTHSDKQPDIAMSPEKVYFTQSVDQLTVPKIFPAVLQASDPPPTVVSPPSLKKYVAPLANPIANSIANSIINHMPIGNQINNQIANQMMNQIASQLVSQVGSQMVTQMATQMPAQMMGRDMCPMRCPLANLEPPSLQCSLCLCLYHNQCTGYIPSYNTSFVCKNCHLANSSMPSSSSSPSQLSHMSGIRPMQKSPSSASLSGSSVLQRFPKPSPIVTKAPPQPKLVPVVTHVRPKTTFNQKLTKSDASSFKSVQKYPKPLVSADNKMNKNNSTVFTGTQIVEKPQRPTEVDPAIFPQSIAILNGHKFIVVPKPNVANTSPVSGVVANPKQADNAPKIIETTFNISSNTTITAIKPTFKPIEEILTRDENKIIQMKPTVIKNEPFNTQTNVISFDNLSAEYGKLLFKSDPANISFEAPGIKRSLSSDVVEESAASKRKTRGRPVLKLIPRVAKKAENGTTGQKVGRPPKAAEGKNKNYFADFYKINQERKYNSLVQIFQYLKMRELAAAARVCRMWREIADTPALWRSVRMKNSQVNDWEGLAGALKRHGTRHLDLRKMLLPSEVPDQVWDQFTEHIATVDSLLRIDLCRCPASVVERVCARMPQLQALTAMSVRCTELNPSPLTTLTNLQELRIKGMTKLTLTSDLKCLENLTKLKHLSITSVKDLGQCGCIAVGGLTSLESLELGECTGEVGGAALLRHLTSLTRLRLERCPGANGGSTLIRTVSNLPLLRQLELINFDIRPGFEDALGKCTNIKRLLIIPTYVSQSATTNRCVLAGVLRLRNSLTHLVWGVTIELLRVTELFIDQCGRNQKESQTASGTGQTSDAKQAQLALMSVVTQRNPKVVGDCIPVLKPVPSRPVEESRTPAVPGRPQVEILPLPALQRLLAEELPDTRLKLLRIPYHATWRQTFNDFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -