Agra017278.1
Basic Information
- Insect
- Arctopsyche grandis
- Gene Symbol
- -
- Assembly
- GCA_029955255.1
- Location
- JARCGT010000059.1:739536-740736[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-08 0.00023 21.2 0.1 28 82 6 58 2 86 0.78 2 2 0.021 48 3.6 0.1 349 394 91 137 83 148 0.79
Sequence Information
- Coding Sequence
- ATGTCCTCGAAAGGGTCGGAATGCGTGCCCATGTTTAGCCCGCCAGTTAAAGTAAAGCCGGACCGAGAAGCCCAGCAAATACAGAGCAAATTAGGTGACTTCGATACTGTTAAACATCTACTTAACCAATCTTCTCTCGGCGTATATGACGAGCCTGCTAGCCCAGCTCCAGGCGGACCTTCTCAAATTGGCGAATTCAAGAAACCTCATCACCAAAGACCCCGGTATTGGAGCCAGAGTGCATTGGATCCTTGCGACGTCTACTACGATGTTGAGAACATCTTAAAGGAGATAAAATCCCTTCCTATTGCTGCACTGTTGACTGCGATTGATGCCACACCCAAAAAAGATGTCTCTCCACTGTTAaagccAATTGAAAATTCGTCGCAGTCAGATTCCTTCCCCAAACCAAAACAAGGTGCACAAATCAAGAGTGGTAAGCTATTTTAA
- Protein Sequence
- MSSKGSECVPMFSPPVKVKPDREAQQIQSKLGDFDTVKHLLNQSSLGVYDEPASPAPGGPSQIGEFKKPHHQRPRYWSQSALDPCDVYYDVENILKEIKSLPIAALLTAIDATPKKDVSPLLKPIENSSQSDSFPKPKQGAQIKSGKLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00158044;
- 90% Identity
- -
- 80% Identity
- -