Agra001358.1
Basic Information
- Insect
- Arctopsyche grandis
- Gene Symbol
- -
- Assembly
- GCA_029955255.1
- Location
- JARCGT010000006.1:996870-999654[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7 4e+03 -2.7 1.6 143 186 121 164 73 206 0.51 2 3 5.6e-14 1.3e-10 41.8 0.1 4 104 271 376 270 387 0.80 3 3 0.018 43 3.8 0.3 349 382 391 426 388 453 0.81
Sequence Information
- Coding Sequence
- ATGGGATATGGAAATGTATCGAATGTGGCGCCACCATGCGGTCACAATAGCGAACCTCGCACGCTCATCGACGAGAAATGTCAAATTTTGGCGCGTAATCCTTTGGACAACCAAATGGTGACATTTCCCAATGAATACCGCATGCTCCTAATTGAGGGGTTAAAGCCATTGAGCGAGTTAATGGAATACAGATTTAAGATGAAGAGACTTGATGGGGAAGATGCTAGATTGAGAAAACGGCCTGAACAACAGAGACCTTTTGAACGTCAGCTTAATGGGCCGCGACATGAAGTTAAACCTTTAGAATACCAAATTGGGCATCAGCGGAGACCTCTAGATCCACAGAGACCCATCGAGCAACATAGGCCTGTTGAACAACGGAGGCATTTAGACCGACTTGGGCAGACTTTACAACAAAAGCCTTTCGAGAGTCAGATTGAGTCTCACCAGAAGCCAGTTAAACTTCACACAAATTCAAGTGAAATACAAGAAAACCCAGCAAAGAGATGTTGTAATGGGATATCTTCTTTGGAAATACCTCGCCCTAGAAATGGTGCACCAATTTGCAGATTGCAGCAGACACAGCCGAAAAAGTCATTACAAATCGCCCCCCAAAAAATTGAAGATCCAAATATTCTGTATGACCGTCCCGGTCGTCCTGCTGATATACGTAATTTCAGCGTCAGCACTTCCGAATATTTACTCAAAGGATGTAGGCCTGGAGATTATTGGTGCGAGTGGCTCATAAAAGATTCGCGCAAGTCCGAAAAACCACGAATTCCGGCGGAAAATATATATGCTAGATTTGTTGAGCGAGATACTCTGCGCGAGAGGGAGCGGCAAGCCCGCGCGCAGATGTCCTCGCAAGGGTCGGAATGCGCACAGGAATGCGTGCCCATGTTTAGGCCGCCAGTGAAaGTAAACCCGGACCGAGTAACCCAGCAAATACAGAGCAAATTAGGTGTATTCAATACTGTTAAACATCTACTTGACGATCCCAAATCTTCTATCGGCGTATATGGCGAGCCTGCTAGCCCAGCTCcaggcGGACCTTCTCAAATTGGTGAATTCAAGAAACCTCATTACACTTCCTCGCAGAATGGACGGTCACACCAAAGACCCCAACATTATGGCAAGAGTGCATTGGATCCTTGCGGTGTTTTTTACAACGTCGAGAATATCATTAAGgAGATGAAATCCCTTCCTATTGCTGCACCATTGACTGCGATTGCTGCCACACCCAGAAAAGAATCTGTCCCCAGATTCAATTTCAACGTCCCTCCATTATTAAAGccAATTGAAAATTCTTCGCAGTCAAATTCCTTCCCCGAACCAATACAAGGTGCACACACCAAGAGTCGTAAGTTATTTTAA
- Protein Sequence
- MGYGNVSNVAPPCGHNSEPRTLIDEKCQILARNPLDNQMVTFPNEYRMLLIEGLKPLSELMEYRFKMKRLDGEDARLRKRPEQQRPFERQLNGPRHEVKPLEYQIGHQRRPLDPQRPIEQHRPVEQRRHLDRLGQTLQQKPFESQIESHQKPVKLHTNSSEIQENPAKRCCNGISSLEIPRPRNGAPICRLQQTQPKKSLQIAPQKIEDPNILYDRPGRPADIRNFSVSTSEYLLKGCRPGDYWCEWLIKDSRKSEKPRIPAENIYARFVERDTLRERERQARAQMSSQGSECAQECVPMFRPPVKVNPDRVTQQIQSKLGVFNTVKHLLDDPKSSIGVYGEPASPAPGGPSQIGEFKKPHYTSSQNGRSHQRPQHYGKSALDPCGVFYNVENIIKEMKSLPIAAPLTAIAATPRKESVPRFNFNVPPLLKPIENSSQSNSFPEPIQGAHTKSRKLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -