Basic Information

Insect: Arctia plantaginis
Gene Symbol: -
Assembly: None
Location: CADEBC010000958.1:618498-621257[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.018 1.1 9.9 1.5 1 21 25 45 25 48 0.92

2 15 0.37 23 5.7 0.3 2 23 75 97 74 97 0.90

3 15 0.013 0.79 10.4 2.2 3 23 125 145 123 145 0.96

4 15 3.9 2.4e+02 2.5 0.1 1 8 149 156 149 159 0.88

5 15 5.9e-05 0.0036 17.7 1.1 3 23 207 228 206 228 0.98

6 15 1.2 73 4.2 0.1 2 23 253 275 252 275 0.92

7 15 2.2 1.3e+02 3.3 0.2 5 23 302 320 298 320 0.89

8 15 0.00046 0.028 14.9 1.2 1 21 324 344 324 345 0.96

9 15 0.22 14 6.4 0.1 1 23 386 409 386 409 0.94

10 15 0.3 19 6.0 0.3 2 23 435 457 434 457 0.95

11 15 0.0011 0.069 13.7 0.6 2 23 481 502 480 502 0.95

12 15 0.00016 0.01 16.3 0.0 1 23 506 529 506 529 0.97

13 15 0.47 29 5.4 0.6 1 23 533 556 533 556 0.96

14 15 9.2e-05 0.0057 17.1 2.0 1 23 595 618 595 618 0.97

15 15 0.00051 0.032 14.7 0.4 1 23 628 651 628 651 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.018	1.1	9.9	1.5	1	21	25	45	25	48	0.92
2	15	0.37	23	5.7	0.3	2	23	75	97	74	97	0.90
3	15	0.013	0.79	10.4	2.2	3	23	125	145	123	145	0.96
4	15	3.9	2.4e+02	2.5	0.1	1	8	149	156	149	159	0.88
5	15	5.9e-05	0.0036	17.7	1.1	3	23	207	228	206	228	0.98
6	15	1.2	73	4.2	0.1	2	23	253	275	252	275	0.92
7	15	2.2	1.3e+02	3.3	0.2	5	23	302	320	298	320	0.89
8	15	0.00046	0.028	14.9	1.2	1	21	324	344	324	345	0.96
9	15	0.22	14	6.4	0.1	1	23	386	409	386	409	0.94
10	15	0.3	19	6.0	0.3	2	23	435	457	434	457	0.95
11	15	0.0011	0.069	13.7	0.6	2	23	481	502	480	502	0.95
12	15	0.00016	0.01	16.3	0.0	1	23	506	529	506	529	0.97
13	15	0.47	29	5.4	0.6	1	23	533	556	533	556	0.96
14	15	9.2e-05	0.0057	17.1	2.0	1	23	595	618	595	618	0.97
15	15	0.00051	0.032	14.7	0.4	1	23	628	651	628	651	0.95

Sequence Information

Coding Sequence: ATGGCGAAACGGAACGCATCGATAGTGTTGCAATACTCTACAGCTTATCCGTTCAGGTACCGAGGTAATGTTTTCCTATGCGCCTACTGCAGCGAGGGCTACGAAGATCCTATCCACTTAAGGAGACATATTAATTGTAATCACCAAAAGTTCAAAGTCTCAAGAGCATTCGGCCATACCAGCAGCGGCAAAGATTACCTTAAGGTTGACTGTACCGATCTAAAATGTAGGCTGTGTTTCAAATCTTTCCTGAACTTAGAAGAAGTCGCTCGACATCTCATTGCAAAACATGATTGTAAAGATACTCGACAGCTATGTCTTGACTATGACATAGGCATGCAACCGTACAAGTTAGTAAAGGATAACTGGATTTGCTTCTTGTGCGAGTTCAAATTTCCAACTGTAACAAAACTCTGTCGCCATATGTCATCGCATTATCAAGAGTATACATGCGAAGTTTGTGggaCCGCATTGGAAATTCACGGACGTAGAAACAGTGCGAATGaaccaaaaaagaaaattgtactTGTATACCAGCCGCCACAGCGGCGAAACGCTGAACTTATACTAACTTATTCTACCGCGTACCCCTTTAAAACTAGATTTAGTCAAATACTCTGCTCATATTGCCATGAAGAATACAGCACTCTCTCAGATTTGAGATACCACATGAAAGTCGAGCATATTAACTCtgactttaaaaatgtattttacagaGCTAAAGATAATCTCATTAAGATTGATATAaccaatttaaaatgtactattTGCACTCAGGAGATCCAAGATATCGACGGTCTAATGAGTCATTTATATAGCGTACATAACAAGCCTGTCAAATTCAATGCTCGTTATGGCGTTCTGCCTTACAAACAAAGTTCTGAAAACCAGTGGATTTGCATATACTGTAATAAGATATTAAATgcgtttattagttttaaacgacatattgttacacattttatgAATTATACATGTGACAAATGCGGAACGATGTTTGTGTCAGACCACGCGTTAAGAGATCATCATCGCCAGGTTAAATGCTTCAGGGCTGCTTACAAGGCTCGAAACGGGAGGGTCTTGAAGCCCAGAACAAATGCAGAAATAATTCTCCAATGTTCTACGGCTTCCCCGTTCAGAACTTGGAAAAGTAATTTCAACTGCGTATTTTGTAGGGTACAAAGTAATGACCCCAGCAGTTTAAGGCTACATGTGGTTACAGCTCACGCTAATTATGATGTTAAAGCAgcgttttataaaaaactaggaaaagattttttaaatattgatattactGATCTTCAATGCAAACTCTGTTTTATGCCAATAGATACTTTTGAAAATCTTATTTACCATCTAAAGAACGATCACCAACAACCCATAAATGATGATGCACAGTTAGGTGTCCTGCCATTTCGATTGAATGACGGATCAATATGGAAGTGCACAATATGCCCAAATGAATTCAAAGACTTTGTGTCCCTAAAGAAGCATACTTCagaacattttcaaaattacgtTTGTGACACATGCGGTGAAGGTTTTATTACGGAATCTGCAATGATAGCTCATACGAAAATACCTCACGAAAACAAGTATAACTGCAGTCGTTGTATAGCTACGTTTTCTTCGCTGGATGAAAGAAATTTACATGTAAAAACACAACATACCTCTATGCCTTACATGTGTGTGTATTGCAAAGAGAAACCGCGCTTCGCGAACTGGGAGGTTCGGAAAAAGCATTTGATGGCAGTTCATAATTACAAAACTGGAGCTGATAAATACGAATGTACGACATGTCAGAAGTCTTTCAAGACGAGATCTGGAAAATACAATCACATGGCGAGAGTACATAGAATTAAGAAAGATTCAGAACTCAATTACCCTTGTCCAAGTTGTCCAAAAGCTTTTACAACCAAATTATTCTTGGACAAGCACGTTGCTAAAAAGCACATTGATGTGTGA
Protein Sequence: MAKRNASIVLQYSTAYPFRYRGNVFLCAYCSEGYEDPIHLRRHINCNHQKFKVSRAFGHTSSGKDYLKVDCTDLKCRLCFKSFLNLEEVARHLIAKHDCKDTRQLCLDYDIGMQPYKLVKDNWICFLCEFKFPTVTKLCRHMSSHYQEYTCEVCGTALEIHGRRNSANEPKKKIVLVYQPPQRRNAELILTYSTAYPFKTRFSQILCSYCHEEYSTLSDLRYHMKVEHINSDFKNVFYRAKDNLIKIDITNLKCTICTQEIQDIDGLMSHLYSVHNKPVKFNARYGVLPYKQSSENQWICIYCNKILNAFISFKRHIVTHFMNYTCDKCGTMFVSDHALRDHHRQVKCFRAAYKARNGRVLKPRTNAEIILQCSTASPFRTWKSNFNCVFCRVQSNDPSSLRLHVVTAHANYDVKAAFYKKLGKDFLNIDITDLQCKLCFMPIDTFENLIYHLKNDHQQPINDDAQLGVLPFRLNDGSIWKCTICPNEFKDFVSLKKHTSEHFQNYVCDTCGEGFITESAMIAHTKIPHENKYNCSRCIATFSSLDERNLHVKTQHTSMPYMCVYCKEKPRFANWEVRKKHLMAVHNYKTGADKYECTTCQKSFKTRSGKYNHMARVHRIKKDSELNYPCPSCPKAFTTKLFLDKHVAKKHIDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00638021;
90% Identity: -
80% Identity: -