Apln013315.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- ZFY
- Assembly
- None
- Location
- CADEBC010000553.1:1782661-1791145[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00047 0.029 14.9 2.5 1 23 235 257 235 257 0.99 2 11 0.16 10 6.9 1.5 1 23 264 287 264 287 0.93 3 11 0.016 0.99 10.0 2.1 1 23 318 341 318 341 0.92 4 11 0.00014 0.0088 16.5 0.7 1 23 345 368 345 368 0.97 5 11 0.0031 0.19 12.3 0.5 2 20 381 399 380 401 0.91 6 11 6.8e-05 0.0042 17.5 3.1 3 23 412 434 411 434 0.95 7 11 0.0014 0.085 13.4 1.2 2 23 441 463 440 463 0.96 8 11 2.5e-05 0.0016 18.9 0.4 2 23 482 503 481 503 0.97 9 11 4.2e-05 0.0026 18.2 2.3 1 23 509 531 509 531 0.99 10 11 1.5e-05 0.00095 19.5 3.8 1 23 537 559 537 559 0.94 11 11 1.1e-05 0.00068 20.0 3.8 1 23 565 588 565 588 0.98
Sequence Information
- Coding Sequence
- ATGCCAGGAAACCAATTTCTACCCCTAGGGATATCAACTAATTTAGGCATCCCTGAAATAGAGTATgTGATAATACCGGATATCTACCCGCAATATCTCTGCAGTTACTGCCAACGTCTTCTTATAAAGAGTAATAGGTTTAAAGAGAGATGTATAGAGACTCAGGAACTGCTTAAGCAAGCAGCTATGGAAGAACCAATGttaacaTTTGATCACGTACACGCTCTATCTCTATCTCTTTCTCCTGCACACTCCCTCTCCACTTCTGACGTCGACACTTCCACAACGTTGTACCCCGAATTCGTAACACACATAAAAGCCGAAGCATTCGACATCGTTTTAAAAGAAGAATCAACAGACCACAGTGATGAAGAACCATTGGCCAAGAAAgcgaaaaagagaaaaaaaaagaaaatagaatatTCTGAATTTGAAATTGGTGATGACACTTTCGAAACGGTTACAAAGAATATTGATTTTTCCGAATTTGAAAATGGTAATTTCGAAAAGGAGAAGAACGTGGTATTTTCAGATTTCGAATTTGAAACTGACACGTTTGAGACGGAGGATTTTGAGACGAATGCGGAAGAGAGTgttgagtttttaaataaagaagatatAGAAGTTATAGTGTTAAGTAAAGAACAGCAGATAGAAGAAATTTTAGCAAGAAAAACctcttataactataataattcattttataaatgtgagttGTGTTACAAAGGATTTATGACAGATTCTACTTATAAGAATCACATGTCAAGACATGAcccaAACACAGGCCCCCATGCCTGCGAGATATGCCACACAAGATGGTCAGACCTCCGCTCCTTGAAAGCCCACAGCACTACAGCCCACGAAAGGAAATACATATGCAAACTCTGTGCCCACACTTCAAAGTCCTGCCATAGGGCTAAGGAACATTTAAAATGGCATAAGGGTTACAAATTTAACTGCAAAATCTGTGGGGCCACCTTCTCTAAGTCCACAAGCCATCTAACTCATGTGAGGTTACAGCATCCATCTAAATATTGCTGTGAAATTTGTGGAGAAAGTTTCATTGGACAGAATGGGTTGAATATGCACAAGAAGAAGGCTCATAAATTGTTTAAGGAACCCAAAATggataaaaatctaatttgcagcgtttgtaatattcattttaaaagtaaagaagCTATGAAAAAACACACAGATACATCAGACAATGGAGTGTGCAATAATAGTCTATGTCCATGTATTCATTGCGGTGAAAACTTTACCACTCGGGAGCTTCTGAAGGAGCATCAGAAGACCCATCAGAAGGAAGAAACTGTGAAATGTGATGAGTGTAACCGCACGTTCGCACACGAGCGCTCGTTCGGCGTGCACTACCAGCGCGTGCACCTCGGCCTCAAGCTCAGGCCGCCGCGACACGAGCCGAGGCTCCGCGCGCACGTCGTCTGCGAGATATGTGGCAAGAAGTGCATCTCAAATGCCACCCTAATTTATCACCAAAGAATACATACTGGAGAGAAGCCCTTCCAATGTAACCAGTGTCCGAAGAAATTCAGTGTCTACCAGAGGCTTCAGATTCACACCAGGACTCACACCGGTGAGAGGCCCTTCAAGTGTTCTCACTGTCCAAAGGCTTTTAAACACAAAGCTGCTTTAAATAGACATGACAGGGTACACACTGGGATCAAACCCTACCAATGCTCCCATTGTTCGAAATCGTTCTCACAATCGAACTCCATGAAGCTCCACGTTAAGACTGTCCATCTAAAAATGCCAGCACCCTACAGGAACAggcgtaataataaaatagaataa
- Protein Sequence
- MPGNQFLPLGISTNLGIPEIEYVIIPDIYPQYLCSYCQRLLIKSNRFKERCIETQELLKQAAMEEPMLTFDHVHALSLSLSPAHSLSTSDVDTSTTLYPEFVTHIKAEAFDIVLKEESTDHSDEEPLAKKAKKRKKKKIEYSEFEIGDDTFETVTKNIDFSEFENGNFEKEKNVVFSDFEFETDTFETEDFETNAEESVEFLNKEDIEVIVLSKEQQIEEILARKTSYNYNNSFYKCELCYKGFMTDSTYKNHMSRHDPNTGPHACEICHTRWSDLRSLKAHSTTAHERKYICKLCAHTSKSCHRAKEHLKWHKGYKFNCKICGATFSKSTSHLTHVRLQHPSKYCCEICGESFIGQNGLNMHKKKAHKLFKEPKMDKNLICSVCNIHFKSKEAMKKHTDTSDNGVCNNSLCPCIHCGENFTTRELLKEHQKTHQKEETVKCDECNRTFAHERSFGVHYQRVHLGLKLRPPRHEPRLRAHVVCEICGKKCISNATLIYHQRIHTGEKPFQCNQCPKKFSVYQRLQIHTRTHTGERPFKCSHCPKAFKHKAALNRHDRVHTGIKPYQCSHCSKSFSQSNSMKLHVKTVHLKMPAPYRNRRNNKIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00824095;
- 90% Identity
- iTF_00823323;
- 80% Identity
- -