Apln011707.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- Zfy1
- Assembly
- None
- Location
- CADEBC010000535.1:596007-601238[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.2 75 4.1 1.1 3 23 251 271 249 271 0.94 2 17 0.13 7.9 7.2 0.1 6 23 283 301 283 301 0.95 3 17 0.95 58 4.5 0.1 3 23 313 334 312 334 0.88 4 17 5.6e-06 0.00035 20.9 0.8 2 23 357 378 357 378 0.97 5 17 5.3 3.3e+02 2.1 0.0 6 23 384 401 383 401 0.91 6 17 0.16 9.6 6.9 3.9 1 11 407 417 407 421 0.87 7 17 1.3 79 4.1 4.0 1 23 531 553 531 553 0.95 8 17 0.0002 0.012 16.1 2.0 2 23 560 582 559 582 0.92 9 17 4.9e-07 3e-05 24.2 0.8 1 23 588 610 588 610 0.99 10 17 8e-07 5e-05 23.6 2.4 1 23 616 638 616 638 0.98 11 17 0.0017 0.11 13.1 2.5 1 23 644 666 644 666 0.96 12 17 0.22 14 6.4 0.6 3 23 719 738 719 738 0.97 13 17 3.9e-06 0.00024 21.4 0.3 1 23 744 767 744 767 0.98 14 17 4.7e-06 0.00029 21.2 1.8 1 23 773 795 773 795 0.98 15 17 1.7e-05 0.001 19.4 0.1 1 23 801 823 801 823 0.98 16 17 0.0039 0.24 12.0 0.0 3 23 830 850 828 850 0.91 17 17 0.001 0.064 13.8 1.8 6 23 860 877 859 878 0.96
Sequence Information
- Coding Sequence
- atgaataACGGCACTgaacaagtatatttattaaattctatacAAAGTCATCCACTAGGTATAACACAAAAACAAGTACCAACACACGGAACCACACCAGTCAATCTTGAAAATGTGGACAATTTCTCAAATGTGTGTCGGACATGTGCCACTATCACACAACTTGTCATCCCTATATTTACCGGAGAGGGGCTGGAGCATCACTTGGCtgaaaaaatacacaaacacttacctataaaaGTTTCCGAGACAGATCTCCTCCCTCTAGTGGTATGCTATCAATGTGTCAGCACTCTGCTAGCTTGGCATGAGTTAGTGGAGTGCTGTTTGCAGGCTGACCGAGCCCTCAAAGCCAAGATTGGCGTTGATACCAGTACTGAAACTCAAAAGGAGAGACAAACCATAACCCTGGCACCTAGCACCACCACAGAAGAGGATTCACAAAGCAAGTCATATTATGGGATGGTGAGAAATGTTCTGATCAAATACTTCCCTCAGTTATCGTTGGAAGAGTATTTGGACACGGAGTTTGTCTGCCAGATGTGCGTAGAAAAACCTGCCTTGACAACTATGGAAAGTCTAGCGGACCATTTGAAATACGATCATAGTTCAGACAGTAAAGACGAGACAgccataaaaatgtttatcaaaaaCTATGTTACATTTGAGGAAGTGTTAGTTTTTGACGATAACGATAGATGTGAACCCAAAAACACCGAAATAATTGAGAAACCTTTGCCTAATTTATTTTGCCCTTATTGCGCAAGTGTATTTTCTTCAGCAACACGTCTAGTGTGCCATCTCAACAAACATTTCCAAGTGACTATCGAAGAAGGGGTTATGTGCTGCGGTATCGTGTATAACAATAAGAAAAACTTTGTGATACATCTCCAAGAAAATCATGttgagagaaagagagacgGTCTGGAGAAAGTGTGCAAGTGTTGTGGTCTAGAAGCAGAAGATGCGAGTGAACTTCAAGCTCATATAAGCGATGCACATCAAAAAAAGGAAGTGTGTAAAACAGATACGCTTCAGAGTCCAAAGAACCAGAAATATATACCAGCAGTTTGTCCGgaatgtaataaaacttttgccAATAAGTACAGCATGTTTCTACATATGAAGAACCACAACGCCGAAATACAGTGTGGTGAAGCTTTCCCTACTAGAACGGCTCGTGACGTACACTCGCGCCTACACACCGGTGATAAACCTTACAGATGTAAATATTGCGGCAAGTGTTACCGCGCCAAGAACACGGACGACTCCCAGTTCCTGGATGTGTCAGAAACTTCAGACCAGACAGATGATAAACCGCTTTCTACATTCAGTACTAAAAAGCCCGAGGATCTATACTGCAAGTTTTATAGTGCGCTCCTTAATTTTAGAAACCATTTTGTCGGAGAACACAACATTCGAGAGTCTTATCCTGATTTCACTGACTCCTCCAGTGCTTCGGAAGTTGAAGAAAATAGTATAGACAGTTACGACGATCTAACCCAGTGTAACATGAGAAAAGATATAATGGATAAGGAGACTAGACTAGAACTTAATCAGGTACAAACTAAGATTAATGGAAAAATATTCTATACGTGTAGAATCTGCAGCAAAAACTTAAGCTCGTCACACACGTACGTGTTTCATAAAAGAATACATACTGGCGAGAGGCCCTGTGTGTGTCACATTTGTGGGAAGCAATTTCGAGCTCCAAACGGATTGCAACGACATCTGACGGAAACGCATGAACGCTTACGAAGATACACTTGCAGTTTATGTCCAAAAAACTTCGCCAACTCGCAGAATTTGAAGCAACATTTGAGGATACACACCGGCGAGAGGCCGTTTGTGTGCTCGCAGTGTGGCAAAAGATTCACCCAGAGCGGTTCGCTGCACGTGCATTTAAAAACGCACAGTGCACAGTTTCCGCATCATTGTGCCGAATGTGGGGCGAAATTCCGGCTGCGATCCGGTTTAGCGAGGCACAGGCTCAAGCATACGGGCGAGCGACCGCACGTGTGCGCTCTCTGCGGGAAAGGGGCGCTCGTGGAGATCGAAATCGAGCGAGGGGTCGTCGACGGCGCCGAAGCGACGAAAACGGCCAAACCGTCAGGAACGGCGACGGTCGCCTCCGACGGACGGAAAACCGTGTGGTGCGAAAAGTGTAATAAGAGCGTATCGGTGGTGTCCTGGCGGAGACACCTGCGTCTGCACAACGGCGAGAAGAGGTACAGCTGCCACACGTGCGGGCGCGCCTTCGCCGACGGCGGGAATCTCGCGCGACACGCGAGGACGCTTCACGCCCGGCAGCGGCCGTTCTCTTGCTCGATATGCCAGAAGGCGTTCTCTCGCAGGGCGCACCTGGAGGACCACGAGAAGTCGCACTCGGAGCGGCGCGAGTTCGTGTGCGACGTGTGCGGCAAGGCTTCGAAGTCGAGCGCGGCGCTGCGCATGCACGCGCGCACGCACGCGCCGCGCGCGCTGCGTTGCGTGCCGTGCGGCGCCGCCTTCCGCCGCGCCGCCGAGCTGCGCGCGCACCGCTCCGTGCACTCCGGCGAGCGCGCGCACGCCTGCGCCTGCGGCCGCGCCTTCCGCCTGCGCACGCAGCTCACACAGCACCAGCGCACGCACCACCCGGACCGAGCGCTCACCTAG
- Protein Sequence
- MNNGTEQVYLLNSIQSHPLGITQKQVPTHGTTPVNLENVDNFSNVCRTCATITQLVIPIFTGEGLEHHLAEKIHKHLPIKVSETDLLPLVVCYQCVSTLLAWHELVECCLQADRALKAKIGVDTSTETQKERQTITLAPSTTTEEDSQSKSYYGMVRNVLIKYFPQLSLEEYLDTEFVCQMCVEKPALTTMESLADHLKYDHSSDSKDETAIKMFIKNYVTFEEVLVFDDNDRCEPKNTEIIEKPLPNLFCPYCASVFSSATRLVCHLNKHFQVTIEEGVMCCGIVYNNKKNFVIHLQENHVERKRDGLEKVCKCCGLEAEDASELQAHISDAHQKKEVCKTDTLQSPKNQKYIPAVCPECNKTFANKYSMFLHMKNHNAEIQCGEAFPTRTARDVHSRLHTGDKPYRCKYCGKCYRAKNTDDSQFLDVSETSDQTDDKPLSTFSTKKPEDLYCKFYSALLNFRNHFVGEHNIRESYPDFTDSSSASEVEENSIDSYDDLTQCNMRKDIMDKETRLELNQVQTKINGKIFYTCRICSKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHERLRRYTCSLCPKNFANSQNLKQHLRIHTGERPFVCSQCGKRFTQSGSLHVHLKTHSAQFPHHCAECGAKFRLRSGLARHRLKHTGERPHVCALCGKGALVEIEIERGVVDGAEATKTAKPSGTATVASDGRKTVWCEKCNKSVSVVSWRRHLRLHNGEKRYSCHTCGRAFADGGNLARHARTLHARQRPFSCSICQKAFSRRAHLEDHEKSHSERREFVCDVCGKASKSSAALRMHARTHAPRALRCVPCGAAFRRAAELRAHRSVHSGERAHACACGRAFRLRTQLTQHQRTHHPDRALT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00441772;
- 90% Identity
- -
- 80% Identity
- -